EY659892

Overview
NameEY659892
Unique NameEY659892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P_HALVA (Glyceraldehyde-3-phosphate dehydrogenase OS=Haloarcula vallismortis GN=gap PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 52/147 (35.37%), Postives = 76/147 (51.70%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG--EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPM--FVVGVNENEYKPE 514
            V++G+NGFGRIGR V R  L  DDVE+V +ND    ++ + Y  +YDSV G+ +   +   DD  L     +    +F   +P ++PW +   +   E+TG+F                V+ISAP K D P+   V GVN +EY  E
Sbjct:    6 VRVGLNGFGRIGRNVFRASLHSDDVEIVGINDVMDDSE-IDYFAQYDSVMGELEGASV---DDGVLTVDGTDFEAGIFHETDPTQLPWDDLDVDVAFEATGIFRTKEDASQHLDAGADKVLISAPPKGDEPVKQLVYGVNHDEYDGE 148          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 51/143 (35.66%), Postives = 74/143 (51.75%), Query Frame = 2
Query:   86 QVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEY 505
            ++K+ INGFGRIGR   R    R D  ++++A+ND        +++ KYDS  G +   ++K   +  +    K + V   RNP  +PW E G + V+E TGVF                VII+AP K D P +VVGVN + Y
Sbjct:   61 KLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDA-DVKPSGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAY 201          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P2_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MW2) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = 2
Query:   95 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 502
            I ING GRIGR+V R+ LQ  ++ +VA+N  +   + + ++  YD+ HG+   + LKV+  +  L  G+  + +   RNPE +PW E   +  +++TG F                V+++ PSK     M V GVN+N+
Sbjct:    5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQ 139          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P2_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MSSA476) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = 2
Query:   95 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 502
            I ING GRIGR+V R+ LQ  ++ +VA+N  +   + + ++  YD+ HG+   + LKV+  +  L  G+  + +   RNPE +PW E   +  +++TG F                V+++ PSK     M V GVN+N+
Sbjct:    5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQ 139          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P2_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain N315) GN=gapA2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = 2
Query:   95 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 502
            I ING GRIGR+V R+ LQ  ++ +VA+N  +   + + ++  YD+ HG+   + LKV+  +  L  G+  + +   RNPE +PW E   +  +++TG F                V+++ PSK     M V GVN+N+
Sbjct:    5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQ 139          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P2_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = 2
Query:   95 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 502
            I ING GRIGR+V R+ LQ  ++ +VA+N  +   + + ++  YD+ HG+   + LKV+  +  L  G+  + +   RNPE +PW E   +  +++TG F                V+++ PSK     M V GVN+N+
Sbjct:    5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQ 139          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P2_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain COL) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 45/139 (32.37%), Postives = 74/139 (53.24%), Query Frame = 2
Query:   95 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 502
            I ING GRIGR+V R+ LQ  ++ +VA+N  +   + + ++  YD+ HG+   + LKV+  +  L  G+  + +   RNPE +PW E   +  +++TG F                V+++ PSK     M V GVN+N+
Sbjct:    5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDNQ 139          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 1.956e-14
Identity = 54/147 (36.73%), Postives = 77/147 (52.38%), Query Frame = 2
Query:   92 KIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENEYKPE 514
            ++ INGFGRIGR   R  L R D  +E+V +ND   T+D  T  ++ +YDS+ G  K       D+ ++    K +     RNP  +PWAE   + V+E+TGVF                V+I+AP K  +   +VVGVN +EYK E
Sbjct:    3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGIND---TSDPRTNAHLLRYDSMLG--KLDADISADENSITVNGKTIKCVSDRNPLNLPWAEWNVDLVIEATGVFVTHEGATKHVQAGAKKVLITAPGKGPNIGTYVVGVNAHEYKHE 144          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P_LACLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactococcus lactis subsp. lactis GN=gap PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.554e-14
Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            VK+GINGFGRIGRL  R I + + VE+  +ND       + ++ KYD+  G++K   ++VK+D   + G K V V   RNPE+I WA++G E V+E+TG F
Sbjct:    3 VKVGINGFGRIGRLALRRIQEVEGVEVAHIND-LTDPAMLAHLLKYDTTQGRFK-GTVEVKEDGFDVNG-KFVKVTAERNPEDIQWADSGVEIVLEATGFF 100          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.554e-14
Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 2
Query:   86 QVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM--FVVGVNENEY 505
            +V++ INGFGRIGR   R    R D  +E+V +ND   T+   T  ++ KYDS+ G +       +D  T+    K + +   RNP ++PW E   + VVE+TGVF                V+I+AP K   +  FVVGVNE +Y
Sbjct:   78 KVRVAINGFGRIGRNFIRCWAGRSDSNMEVVCIND---TSGVKTASHLLKYDSILGTFDADVSAGED--TISVNGKTIKIVSNRNPLQLPWKEMNIDIVVEATGVFVDAPGAGKHIEAGAKKVLITAPGKGDGIGTFVVGVNEKDY 218          
The following BLAST results are available for this feature:
BLAST of EY659892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
G3P_HALVA1.147e-1435.37Glyceraldehyde-3-phosphate dehydrogenase OS=Haloar... [more]
G3PA_ARATH1.147e-1435.66Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3P2_STAAW1.147e-1432.37Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAAS1.147e-1432.37Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAAN1.147e-1432.37Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAAM1.147e-1432.37Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAAC1.147e-1432.37Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_SYNY31.956e-1436.73Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Syne... [more]
G3P_LACLA2.554e-1444.55Glyceraldehyde-3-phosphate dehydrogenase OS=Lactoc... [more]
G3PA_CHOCR2.554e-1436.30Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659892 ID=EY659892; Name=EY659892; organism=Citrus sinensis; type=EST; length=517bp
AACGGAGGCGTNCGGNTCTCCCCTTTCATACAAATGTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGCAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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