EY659892

Overview
NameEY659892
Unique NameEY659892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:304..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P_STRP1 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=gap PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            VK+GINGFGRIGRL  R I   + VE+  +ND     + + ++ KYD+  G++    ++VK+    + G   + V   R+PE I WA  G E V+E+TG F
Sbjct:    3 VKVGINGFGRIGRLAFRRIQNIEGVEVTRIND-LTDPNMLAHLLKYDTTQGRF-DGTVEVKEGGFEVNGNF-IKVSAERDPENIDWATDGVEIVLEATGFF 100          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: G3P_STREQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equisimilis GN=gap PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 40/101 (39.60%), Postives = 59/101 (58.42%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF 391
            VK+GINGFGRIGRL  R I   + VE+  +ND     + + ++ KYD+  G++    ++VK+    + G   + V   R+PE I WA  G E V+E+TG F
Sbjct:    3 VKVGINGFGRIGRLAFRRIQNVEGVEVTRIND-LTDPNMLAHLLKYDTTQGRF-DGTVEVKEGGFEVNGNF-IKVSAERDPENIDWATDGVEIVLEATGFF 100          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: E4PD_VIBFM (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=epd PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 46/153 (30.07%), Postives = 75/153 (49.02%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP------VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP--SKDAPMFVVGVNENEYKPE 514
            +++ INGFGRIGR V R + +   RD +E+VAVN+     + M ++F+YDS HG+++H   KV  D+  L+ + P      V +    +   +PW     + +++ TGV+                V+ S P  S      + GVN +   PE
Sbjct:    2 LRVAINGFGRIGRSVLRALYESDKRDKIEVVAVNE-LSQPEAMAHLFQYDSTHGRFQH---KVTHDQEYLYIDLPNGSQDKVRILHQADLSLLPWQSLEVDLILDCTGVYGSKADGEKHINAGAKKVLFSHPGGSDLDNTIIYGVNHDTLLPE 150          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: E4PD_SHEFN (D-erythrose-4-phosphate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=epd PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 42/147 (28.57%), Postives = 75/147 (51.02%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD--APMFVVGVNENEYKPE 514
            +++ ING+GRIGR + R + +   R  +++VA+N+     + + ++ +YD+ HG++K H +K+  D+ LL G+  + +    +   +PWAE   + V E+TG                  V+IS PS        V GVN +  + E
Sbjct:    2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINE-LAKPEAICHLTQYDTTHGRFK-HTVKLNGDQ-LLIGDDSILLLNQPDANLLPWAELDIDIVYEATGSLIDRQACEAHIHAGAKQVLISHPSSADVDETIVYGVNHDLLRAE 145          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: E4PD_VIBF1 (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=epd PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 46/153 (30.07%), Postives = 74/153 (48.37%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP------VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP--SKDAPMFVVGVNENEYKPE 514
            +++ INGFGRIGR V R + +   RD +E+VAVN+     + M ++F+YDS HG+++H   KV  D+   + + P      V +    +   +PW     + V++ TGV+                V+ S P  S      + GVN +   PE
Sbjct:    2 LRVAINGFGRIGRSVLRALYESDKRDKIEVVAVNE-LSQPEAMAHLFQYDSTHGRFQH---KVTHDQEYPYSDVPDSSQDKVRILHQADLSLLPWQSLEVDLVLDCTGVYGSKSDGEKHITAGAKKVLFSHPGGSDLDNTIIYGVNHDTLLPE 150          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: E4PD_SHESR (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain MR-7) GN=epd PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 40/147 (27.21%), Postives = 77/147 (52.38%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD--APMFVVGVNENEYKPE 514
            +++ ING+GRIGR + R + +   R  +++VA+N+     + + ++ +YD+ HG+++   +K+ DD+ +L G+  + +    +P ++PW E   + V E+TG                  V+IS PS        V GVN++  + E
Sbjct:    2 IRVAINGYGRIGRSILRALYESGKRQQIQIVAINE-LAKPEAIVHLTQYDTTHGRFQPR-VKLVDDQ-MLIGDDVIKILHEPDPAKLPWREMDIDIVYEATGAILDRNSCEAHIHAGAKQVLISHPSSADVDGTIVYGVNQDLLRAE 145          
BLAST of EY659892 vs. ExPASy Swiss-Prot
Match: E4PD_SHELP (D-erythrose-4-phosphate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=epd PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 42/148 (28.38%), Postives = 73/148 (49.32%), Query Frame = 2
Query:   89 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVNENEYKPE 514
            +K+ ING+GRIGR + R + +   RD +++VA+N+     + M ++ +YD+ HG+++       D   +  G+  + +    + E++PW     + V E+TG                  V+IS PS    DA + V GVN  + K E
Sbjct:    2 IKVAINGYGRIGRSILRALYESGKRDQIQIVAINE-LANPEAMLHLTQYDTTHGRFQ--SPASLDANVMTIGDDRIQLLHEADAEKLPWRSLDIDIVFEATGALIDRQACEAHIRAGAKQVLISHPSSGDVDATI-VYGVNHQDLKAE 145          
The following BLAST results are available for this feature:
BLAST of EY659892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
G3P_STRP14.509e-1139.60Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STREQ4.509e-1139.60Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
E4PD_VIBFM4.509e-1130.07D-erythrose-4-phosphate dehydrogenase OS=Vibrio fi... [more]
E4PD_SHEFN5.888e-1128.57D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_VIBF17.691e-1130.07D-erythrose-4-phosphate dehydrogenase OS=Vibrio fi... [more]
E4PD_SHESR7.691e-1127.21D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SHELP7.691e-1128.38D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659892 ID=EY659892; Name=EY659892; organism=Citrus sinensis; type=EST; length=517bp
AACGGAGGCGTNCGGNTCTCCCCTTTCATACAAATGTCTTCACCACTCTT
TCACCGCTCAATTTCATCTCTCGAGAATCATGGGGCAGGTCAAGATCGGA
ATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCA
GAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCG
ATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAG
CACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAA
GCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTG
AGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAG
GATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTC
AGCCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACG
AGTACAAACCAGAGCTC
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