EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3535 contig Csv1_Contig3535:1..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_NOSP7 (Glucose-1-phosphate adenylyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgC PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.432e-65
Identity = 117/158 (74.05%), Postives = 134/158 (84.81%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + VL IILGGGAGTRLYPLTK RAKPAVP+   YRLIDIPVSNC+NS I KIYVLTQFNSASLNRH++R Y  N  G+ NEGFVEVLAAQQ+PE+PNWFQGTADAVRQYLWL EE +V   L+L+GDHLYRMDY +FIQ HR+T ADIT+  +P+DE+
Sbjct:    2 KKVLSIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIFKIYVLTQFNSASLNRHIARTY--NFTGF-NEGFVEVLAAQQTPENPNWFQGTADAVRQYLWLMEEWDVEEYLILSGDHLYRMDYRQFIQRHRDTGADITLSVIPIDER 156

HSP 2 Score: 32.3426 bits (72), Expect = 4.432e-65
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQK 899
            +R + FGLMKID+ GR+++F E  K
Sbjct:  156 RRASDFGLMKIDDSGRIIDFSEKPK 180
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ANAVT (Glucose-1-phosphate adenylyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgC PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 1.071e-63
Identity = 114/158 (72.15%), Postives = 134/158 (84.81%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + VL IILGGGAGTRLYPLTK RAKPAVP+   YRLIDIPVSNC+NS I KIYVLTQFNSASLNRH++R Y  N  G+ +EGFVEVLAAQQ+PE+PNWFQGTADAVRQYLW+ +E +V   L+L+GDHLYRMDY  FIQ HRET+ADIT+  +P+D++
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIFKIYVLTQFNSASLNRHIARTY--NFSGF-SEGFVEVLAAQQTPENPNWFQGTADAVRQYLWMLQEWDVDEFLILSGDHLYRMDYRLFIQRHRETNADITLSVIPIDDR 156

HSP 2 Score: 31.187 bits (69), Expect = 1.071e-63
Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQK 899
            +R + FGLMKID  GR+++F E  K
Sbjct:  156 RRASDFGLMKIDNSGRVIDFSEKPK 180
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ANASP (Glucose-1-phosphate adenylyltransferase OS=Anabaena sp. (strain PCC 7120) GN=glgC PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 1.071e-63
Identity = 114/158 (72.15%), Postives = 134/158 (84.81%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + VL IILGGGAGTRLYPLTK RAKPAVP+   YRLIDIPVSNC+NS I KIYVLTQFNSASLNRH++R Y  N  G+ +EGFVEVLAAQQ+PE+PNWFQGTADAVRQYLW+ +E +V   L+L+GDHLYRMDY  FIQ HRET+ADIT+  +P+D++
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPVAGKYRLIDIPVSNCINSEIFKIYVLTQFNSASLNRHIARTY--NFSGF-SEGFVEVLAAQQTPENPNWFQGTADAVRQYLWMLQEWDVDEFLILSGDHLYRMDYRLFIQRHRETNADITLSVIPIDDR 156

HSP 2 Score: 31.187 bits (69), Expect = 1.071e-63
Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQK 899
            +R + FGLMKID  GR+++F E  K
Sbjct:  156 RRASDFGLMKIDNSGRVIDFSEKPK 180
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP7 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glgC PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.890e-63
Identity = 117/158 (74.05%), Postives = 132/158 (83.54%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + VL IILGGGAGTRLYPLTK RAKPAVPL   YRLIDIPVSNC+NS I+KIYVLTQFNSASLNRHLSR Y  N  G+ N+ FVEVLAAQQ+ E+P+WFQGTADAVRQYLWL EE +V   L+L+GDHLYRMDY  +IQ HRET ADIT+  +P+DEK
Sbjct:    2 KRVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEITKIYVLTQFNSASLNRHLSRTY--NFTGF-NDEFVEVLAAQQTAENPSWFQGTADAVRQYLWLMEEWDVDEYLILSGDHLYRMDYREYIQRHRETKADITLSVVPIDEK 156

HSP 2 Score: 31.5722 bits (70), Expect = 2.890e-63
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQK 899
            KR ++FGLMKID+  R+++F E  K
Sbjct:  156 KRASSFGLMKIDDNARVVDFSEKPK 180

HSP 3 Score: 21.1718 bits (43), Expect = 2.890e-63
Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 2 
Query:  875 IEFSGEPKGDTLR 913
            ++FS +PKG+ LR
Sbjct:  173 VDFSEKPKGEALR 185
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP6 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgC PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 4.037e-63
Identity = 114/158 (72.15%), Postives = 135/158 (85.44%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            ++VL IILGGGAG+RLYPLTK+RAKPAVPL   YRLIDIPVSNC+N++I+KIYVLTQFNSASLNRHLS+ Y  N+      GFVEVLAAQ +PE+PNWFQGTADAVRQYLWL +E +V   L+L+GDHLYRMDY +FIQ HR+T+ADIT+  LP+DEK
Sbjct:    2 KNVLAIILGGGAGSRLYPLTKQRAKPAVPLAGKYRLIDIPVSNCINADINKIYVLTQFNSASLNRHLSQTY--NLSSGFGNGFVEVLAAQITPENPNWFQGTADAVRQYLWLIKEWDVDEYLILSGDHLYRMDYSQFIQRHRDTNADITLSVLPIDEK 157

HSP 2 Score: 30.0314 bits (66), Expect = 4.037e-63
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQK 899
            KR + FGLMK+D  GR++ F E  K
Sbjct:  157 KRASDFGLMKLDGSGRVVEFSEKPK 181
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SYNE7 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=glgC PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 4.037e-63
Identity = 114/158 (72.15%), Postives = 135/158 (85.44%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            ++VL IILGGGAG+RLYPLTK+RAKPAVPL   YRLIDIPVSNC+N++I+KIYVLTQFNSASLNRHLS+ Y  N+      GFVEVLAAQ +PE+PNWFQGTADAVRQYLWL +E +V   L+L+GDHLYRMDY +FIQ HR+T+ADIT+  LP+DEK
Sbjct:    2 KNVLAIILGGGAGSRLYPLTKQRAKPAVPLAGKYRLIDIPVSNCINADINKIYVLTQFNSASLNRHLSQTY--NLSSGFGNGFVEVLAAQITPENPNWFQGTADAVRQYLWLIKEWDVDEYLILSGDHLYRMDYSQFIQRHRDTNADITLSVLPIDEK 157

HSP 2 Score: 30.0314 bits (66), Expect = 4.037e-63
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQK 899
            KR + FGLMK+D  GR++ F E  K
Sbjct:  157 KRASDFGLMKLDGSGRVVEFSEKPK 181
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CYAA5 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=glgC PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.984e-62
Identity = 113/158 (71.52%), Postives = 132/158 (83.54%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + VL IILGGGAGTRLYPLTK RAKPAVPL   YRLIDIPVSNC+N+ I KIYVLTQFNSASLNRHL+R Y  N  G+ ++GFVEVLAAQQ+ E+P+WFQGTADAVRQY WLF+E +V   L+L+GDHLYRMDY  F++ HRET ADIT+  +P+DEK
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINAEILKIYVLTQFNSASLNRHLTRTY--NFTGF-HDGFVEVLAAQQTTENPSWFQGTADAVRQYGWLFDEWDVDEYLILSGDHLYRMDYSDFVKRHRETGADITLSVVPIDEK 156

HSP 2 Score: 34.2686 bits (77), Expect = 1.984e-62
Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQK 899
            KR ++FGLMKID+ GR+++F E  K
Sbjct:  156 KRASSFGLMKIDDNGRIVDFSEKPK 180
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP8 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glgC PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.398e-62
Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + VL IILGGGAGTRLYPLTK RAKPAVPL   YRLIDIP+SNC+NS I KIYVLTQFNSASLNRHL+R Y  N  G+ ++GFVEVLAAQQ+ E+P WFQGTADAVRQYLW F+E ++   L+L+GDHLYRMDY  FIQ HRET ADIT+  +P+DE+
Sbjct:    2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPLSNCINSEILKIYVLTQFNSASLNRHLTRTY--NFTGF-SDGFVEVLAAQQTAENPKWFQGTADAVRQYLWAFQEWDIDEYLILSGDHLYRMDYRDFIQRHRETGADITLSVVPIDEE 156

HSP 2 Score: 32.3426 bits (72), Expect = 4.398e-62
Identity = 13/25 (52.00%), Postives = 20/25 (80.00%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQK 899
            +R ++FGLMKID+ GR+++F E  K
Sbjct:  156 ERASSFGLMKIDDHGRVVDFSEKPK 180
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SYNPW (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain WH7803) GN=glgC PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.271e-61
Identity = 111/158 (70.25%), Postives = 129/158 (81.65%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + VL IILGGGAGTRLYPLTK RAKPAVPL   YRLIDIP+SNC+NSNI+K+YVLTQFNSASLNRHLS+ Y  N+     +GFVEVLAAQQ+PE P+WF+GTADAVR+Y WLF+E +V   L+L+GD LYRMDY  FI  HR T AD+TV ALP+D K
Sbjct:    2 KRVLAIILGGGAGTRLYPLTKMRAKPAVPLAGKYRLIDIPISNCINSNINKMYVLTQFNSASLNRHLSQTY--NLSAGFGQGFVEVLAAQQTPESPSWFEGTADAVRKYQWLFQEWDVDEYLILSGDQLYRMDYSLFINHHRSTGADLTVAALPVDAK 157

HSP 2 Score: 32.7278 bits (73), Expect = 1.271e-61
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQK 899
            K+  AFGLM+ DE+GR+L F E  K
Sbjct:  157 KQAEAFGLMRTDEDGRILEFREKPK 181
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.657e-61
Identity = 114/158 (72.15%), Postives = 135/158 (85.44%), Query Frame = 1 
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + VL IILGGGAGTRLYPLTK RAKPAVPL   YRLIDIPVSNC+NS I KIYVLTQFNSASLNRH+SRAY  N  G++ EGFVEVLAAQQ+ ++P+WFQGTADAVRQYLWLF E +V   L+L+GDHLYRMDY +F++ HRET+ADIT+  +P+D++
Sbjct:   12 KRVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEIVKIYVLTQFNSASLNRHISRAY--NFSGFQ-EGFVEVLAAQQTKDNPDWFQGTADAVRQYLWLFREWDVDEYLILSGDHLYRMDYAQFVKRHRETNADITLSVVPVDDR 166

HSP 2 Score: 26.1794 bits (56), Expect = 1.657e-61
Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLEN-QKETL*GMK 920
            ++    GLMKID +GR+ +F E  Q E L  M+
Sbjct:  166 RKAPELGLMKIDAQGRITDFSEKPQGEALRAMQ 198
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_NOSP74.432e-6574.05Glucose-1-phosphate adenylyltransferase OS=Nostoc ... [more]
GLGC_ANAVT1.071e-6372.15Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_ANASP1.071e-6372.15Glucose-1-phosphate adenylyltransferase OS=Anabaen... [more]
GLGC_CYAP72.890e-6374.05Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNP64.037e-6372.15Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_SYNE74.037e-6372.15Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_CYAA51.984e-6271.52Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_CYAP84.398e-6271.52Glucose-1-phosphate adenylyltransferase OS=Cyanoth... [more]
GLGC_SYNPW1.271e-6170.25Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]
GLGC_SYNY31.657e-6172.15Glucose-1-phosphate adenylyltransferase OS=Synecho... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
back to top