EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHEFN (Glucose-1-phosphate adenylyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=glgC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.317e-31
Identity = 74/162 (45.68%), Postives = 104/162 (64.20%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            +R    +IL GG G+RLY LT  RAKPA+  G  YR+ID P+SNC+NS I ++ V+TQ+ S SL RH++R +    G +K E    VE+L A Q     NW+QGTADAV Q + +  +     +++L+GDH+YRMDY   + AH E+ A++TV  L  P+DE
Sbjct:   11 TRDTYALILAGGRGSRLYELTDWRAKPALYFGGKYRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVTRGW----GHFKKELGESVEILPASQQTSG-NWYQGTADAVFQNIDIIRQEIPKYVMILSGDHIYRMDYAGLLAAHAESGAEMTVCCLETPIDE 167          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SACD2 (Glucose-1-phosphate adenylyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=glgC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.317e-31
Identity = 77/173 (44.51%), Postives = 110/173 (63.58%), Query Frame = 1
Query:  337 LDPEA------SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            LDP +      +R  + ++L GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I +I +LTQ+ + SL RH+ R ++S    +K E   +VE+L A Q    PNW+QGTADA+ Q L + +      ILVL+GDH+Y+MDY   I  H ET AD+TV  +  P++E
Sbjct:    2 LDPNSRYVSRLTRDTVALVLAGGRGSRLHELTDWRAKPALHFGGKFRIIDFPLSNCVNSGIRRIGILTQYKAHSLIRHVIRGWSS----FKKEFGEYVEILPASQR-YSPNWYQGTADAIYQNLDILQAEAPKYILVLSGDHVYQMDYGAIIAHHVETGADLTVSCIEVPIEE 169          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_LACLS (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=glgC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.317e-31
Identity = 68/157 (43.31%), Postives = 99/157 (63.06%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            +LG+IL GG GTRL  LTK  AKPAVP G  YR+ID  +SNC NSN+  + V+TQ+   +LN H+       + G  N G V +L    S E   WF+GT+ AV Q +   ++ N   +L+L+GDH+Y+MDYE  +++H+E +A +TV  +  P++E
Sbjct:    5 MLGLILAGGQGTRLGKLTKDVAKPAVPFGGRYRIIDFALSNCANSNVKNVGVITQYQPLTLNAHIGNGAPWGLNGI-NSG-VTILQPYSSQEGSKWFEGTSHAVYQNISYIDQQNPEYVLILSGDHIYKMDYEAMLESHKEREASLTVSVMEVPLEE 159          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_LACLA (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. lactis GN=glgC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.317e-31
Identity = 68/157 (43.31%), Postives = 99/157 (63.06%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            +LG+IL GG GTRL  LTK  AKPAVP G  YR+ID  +SNC NSN+  + V+TQ+   +LN H+       + G  N G V +L    S E   WF+GT+ AV Q +   ++ N   +L+L+GDH+Y+MDYE  +++H+E +A +TV  +  P++E
Sbjct:    5 MLGLILAGGQGTRLGKLTKDVAKPAVPFGGRYRIIDFALSNCANSNVKNVGVITQYQPLTLNAHIGNGAPWGLNGI-NSG-VTILQPYSSQEGSKWFEGTSHAVYQNISYIDQQNPEYVLILSGDHIYKMDYEAMLESHKEREASLTVSVMEVPLEE 159          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_MAGSA (Glucose-1-phosphate adenylyltransferase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.928e-31
Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 1
Query:  313 DSKNSQTCLDPEAS---RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            D     T +D E +   R  L +IL GG G+RL  LT   AKPA+P    +R++D  +SNC+NS I +I VLTQ+ + SL +H+ R +    G +    F+E+L AQQ  +  NW++GTADAV Q L +   H    +LVLAGDH+Y+M Y + +  H    AD+TV  +
Sbjct:    3 DPTERGTAIDIEVNDRLRKTLALILAGGRGSRLMDLTDWHAKPAIPFAGKFRIVDFTLSNCINSGIRRIGVLTQYKAHSLLQHIQRGWGFLRGEFNE--FIELLPAQQRTQGENWYKGTADAVFQNLDIIHAHRPEHVLVLAGDHVYKMHYGKMLAHHLAAGADVTVACI 170          

HSP 2 Score: 22.7126 bits (47), Expect = 2.928e-31
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLE 890
            FG+M +DE+ R++ F E
Sbjct:  180 FGVMAVDEDDRVIRFDE 196          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB8 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS185) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.929e-31
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I ++ V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + NW+QGTADAV Q + +        ++VL+GDH+YRMDY   + AH E+ AD+TV  L
Sbjct:   11 TRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGW----GHFKKELGESVEILPASQRYSE-NWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCL 161          

HSP 2 Score: 26.5646 bits (57), Expect = 2.929e-31
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLENQKE 902
            +FG+M++DEE R+L F E  ++
Sbjct:  171 SFGVMEVDEEMRILGFEEKPQQ 192          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB5 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.929e-31
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I ++ V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + NW+QGTADAV Q + +        ++VL+GDH+YRMDY   + AH E+ AD+TV  L
Sbjct:   11 TRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGW----GHFKKELGESVEILPASQRYSE-NWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCL 161          

HSP 2 Score: 26.5646 bits (57), Expect = 2.929e-31
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLENQKE 902
            +FG+M++DEE R+L F E  ++
Sbjct:  171 SFGVMEVDEEMRILGFEEKPQQ 192          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB2 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS223) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.929e-31
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I ++ V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + NW+QGTADAV Q + +        ++VL+GDH+YRMDY   + AH E+ AD+TV  L
Sbjct:   11 TRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGW----GHFKKELGESVEILPASQRYSE-NWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCL 161          

HSP 2 Score: 26.5646 bits (57), Expect = 2.929e-31
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLENQKE 902
            +FG+M++DEE R+L F E  ++
Sbjct:  171 SFGVMEVDEEMRILGFEEKPQQ 192          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ENT38 (Glucose-1-phosphate adenylyltransferase OS=Enterobacter sp. (strain 638) GN=glgC PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 4.966e-31
Identity = 74/167 (44.31%), Postives = 99/167 (59.28%), Query Frame = 1
Query:  319 KNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S +L +H+ R + S      NE FV++L AQQ     NW++GTADAV Q L +   +    I++LAGDH+Y+ DY   +  H E  A  TV  LP+
Sbjct:    6 KNDPLMLARQLPLKTVALILAGGRGTRLKDLTIKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SFFSEEMNE-FVDLLPAQQRVHGENWYRGTADAVTQNLDIIRRYGAEYIVILAGDHIYKQDYSHMLIDHVEKGARCTVACLPV 170          

HSP 2 Score: 23.483 bits (49), Expect = 4.966e-31
Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLE 890
            AFG+M +DE   +++F+E
Sbjct:  177 AFGVMDVDENDLIIDFVE 194          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_KLEP7 (Glucose-1-phosphate adenylyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glgC PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.966e-31
Identity = 72/167 (43.11%), Postives = 100/167 (59.88%), Query Frame = 1
Query:  319 KNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I +I V+TQ+ S +L +H+ R + S      NE FV++L AQQ     NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+
Sbjct:    6 KNDPLMLARQLPIKSVALILAGGRGTRLKDLTIKRAKPAVHFGGKFRIIDFALSNCINSGIRRIGVITQYQSHTLVQHIQRGW-SFFSEEMNE-FVDLLPAQQRVHGENWYRGTADAVTQNLDIISRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPV 170          

HSP 2 Score: 24.6386 bits (52), Expect = 4.966e-31
Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M +DE  +++ F+E
Sbjct:  176 SAFGVMAVDENEKIIEFVE 194          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_SHEFN2.317e-3145.68Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_SACD22.317e-3144.51Glucose-1-phosphate adenylyltransferase OS=Sacchar... [more]
GLGC_LACLS2.317e-3143.31Glucose-1-phosphate adenylyltransferase OS=Lactoco... [more]
GLGC_LACLA2.317e-3143.31Glucose-1-phosphate adenylyltransferase OS=Lactoco... [more]
GLGC_MAGSA2.928e-3141.18Glucose-1-phosphate adenylyltransferase OS=Magneto... [more]
GLGC_SHEB82.929e-3145.51Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_SHEB52.929e-3145.51Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_SHEB22.929e-3145.51Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_ENT384.966e-3144.31Glucose-1-phosphate adenylyltransferase OS=Enterob... [more]
GLGC_KLEP74.966e-3143.11Glucose-1-phosphate adenylyltransferase OS=Klebsie... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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