EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ERWCT (Glucose-1-phosphate adenylyltransferase OS=Erwinia carotovora subsp. atroseptica GN=glgC PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 73/171 (42.69%), Postives = 105/171 (61.40%), Query Frame = 1
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            V++ K+    L  +     + +IL GG GTRL  LT  RAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S +L +H+ R + S +    NE FV++L AQQ     +W++GTADAV Q L +   +    +++LAGDH+Y+MDY R +  H E  A+ TV  LP+
Sbjct:    2 VNNDKHDPLMLARQLPLKSVALILAGGRGTRLKGLTALRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SFLNAEMNE-FVDLLPAQQRYSTDHWYRGTADAVCQNLDIIRRYRAEYMVILAGDHIYKMDYSRMLIDHVEKGAECTVACLPV 170          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOP2 (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=glgC PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 3.153e-30
Identity = 70/154 (45.45%), Postives = 98/154 (63.64%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R  +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RHL R + +     +NE F ++L A Q   D  W++GTADAV Q + + E ++   I++LAGDH+Y+MDYE+ +Q H E  AD+TV  L
Sbjct:   10 ARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQRGW-NFFRPERNESF-DILPASQRVSDDMWYRGTADAVYQNIDIIESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGCL 161          

HSP 2 Score: 22.7126 bits (47), Expect = 3.153e-30
Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            TAFG+M +D +  + +FLE
Sbjct:  169 TAFGVMHVDAKDVIQSFLE 187          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOE4 (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=glgC PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.108e-30
Identity = 70/151 (46.36%), Postives = 95/151 (62.91%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            VLGI+L GG G RLYPLT  RAKPAVP G  YRLID  +SN +N+   +I VLTQ+ S SL+RH+S+ +   + G+  E    V A Q+    P W+ G+ADA+ Q L L  + +   I+V   DH+YRMD E+ +Q H E+ A +TV  +
Sbjct:    7 VLGIVLAGGEGKRLYPLTADRAKPAVPFGGAYRLIDFVLSNLVNAGYLRICVLTQYKSHSLDRHISQTW--RLSGFAGEYITPVPAQQRL--GPRWYTGSADAILQSLNLVYDEDPEYIVVFGADHVYRMDPEQMVQHHIESGAGVTVAGI 153          

HSP 2 Score: 24.2534 bits (51), Expect = 4.108e-30
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLE 890
            AFG +  DE GR+  FLE
Sbjct:  162 AFGCIDSDESGRITQFLE 179          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBVY (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio vulnificus (strain YJ016) GN=glgC2 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.108e-30
Identity = 66/161 (40.99%), Postives = 95/161 (59.01%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYA---SNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + +L +IL GG G+RL PLT  RAKPAVP G  YR+ID  ++NCL+S + KI VLTQ+ S SL +HL   ++     +G Y            Q  +   W++GTADA+   LWL E      ++VL+GDH+YRMDY   ++ H   +A +TV  + ++ K
Sbjct:    2 QDILTVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYKSHSLQKHLRDGWSIFNPELGEYITS------VPPQMRKGGKWYEGTADAIYHNLWLLERSEAKYVMVLSGDHIYRMDYAPMLEEHIANNAALTVACMDVNCK 156          

HSP 2 Score: 24.6386 bits (52), Expect = 4.108e-30
Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K   AFG+M IDE  R+ +F+E
Sbjct:  156 KEAKAFGVMGIDEHHRVHSFVE 177          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBVU (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio vulnificus GN=glgC2 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.108e-30
Identity = 66/161 (40.99%), Postives = 95/161 (59.01%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYA---SNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            + +L +IL GG G+RL PLT  RAKPAVP G  YR+ID  ++NCL+S + KI VLTQ+ S SL +HL   ++     +G Y            Q  +   W++GTADA+   LWL E      ++VL+GDH+YRMDY   ++ H   +A +TV  + ++ K
Sbjct:    2 QDILTVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYKSHSLQKHLRDGWSIFNPELGEYITS------VPPQMRKGGKWYEGTADAIYHNLWLLERSEAKYVMVLSGDHIYRMDYAPMLEEHIANNAALTVACMDVNCK 156          

HSP 2 Score: 24.6386 bits (52), Expect = 4.108e-30
Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K   AFG+M IDE  R+ +F+E
Sbjct:  156 KEAKAFGVMGIDERHRVHSFVE 177          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOSR (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus sp. (strain RHA1) GN=glgC PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.108e-30
Identity = 69/151 (45.70%), Postives = 95/151 (62.91%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            VLGI+L GG G RLYPLT  RAKPAVP G  YRLID  +SN +N+   ++ VLTQ+ S SL+RH+S+ +   + G+  E    V A Q+    P W+ G+ADA+ Q L L  + +   I+V   DH+YRMD E+ +Q H E+ A +TV  +
Sbjct:    7 VLGIVLAGGEGKRLYPLTADRAKPAVPFGGAYRLIDFVLSNLVNAGYLRLCVLTQYKSHSLDRHISQTW--RLSGFAGEYITPVPAQQRL--GPRWYTGSADAILQSLNLVYDEDPEYIVVFGADHVYRMDPEQMVQHHIESGAGVTVAGI 153          

HSP 2 Score: 25.0238 bits (53), Expect = 4.108e-30
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLE 890
            AFG +  DE GR++ FLE
Sbjct:  162 AFGCIDSDESGRIVQFLE 179          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOOB (Glucose-1-phosphate adenylyltransferase OS=Rhodococcus opacus (strain B4) GN=glgC PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.108e-30
Identity = 69/151 (45.70%), Postives = 95/151 (62.91%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            VLGI+L GG G RLYPLT  RAKPAVP G  YRLID  +SN +N+   ++ VLTQ+ S SL+RH+S+ +   + G+  E    V A Q+    P W+ G+ADA+ Q L L  + +   I+V   DH+YRMD E+ +Q H E+ A +TV  +
Sbjct:    7 VLGIVLAGGEGKRLYPLTADRAKPAVPFGGAYRLIDFVLSNLVNAGYLRLCVLTQYKSHSLDRHISQTW--RLSGFAGEYITPVPAQQRL--GPRWYTGSADAILQSLNLVYDEDPEYIVVFGADHVYRMDPEQMVQHHIESGAGVTVAGI 153          

HSP 2 Score: 25.0238 bits (53), Expect = 4.108e-30
Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLE 890
            AFG +  DE GR++ FLE
Sbjct:  162 AFGCIDSDESGRIVQFLE 179          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHITR (Glucose-1-phosphate adenylyltransferase OS=Rhizobium tropici GN=glgC PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 5.345e-30
Identity = 67/157 (42.68%), Postives = 98/157 (62.42%), Query Frame = 1
Query:  343 PEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            P A R  +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RH+ R + +     +NE F ++L A Q   +  W++GTADAV Q + + E +    +++LAGDH+Y+MDYE  +Q H ++ AD+T+  L
Sbjct:    7 PAAGRDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKTRIIDFALSNALNSGIRRIGVATQYKAHSLIRHMQRGW-NFFRPERNESF-DILPASQRVSETQWYEGTADAVYQNIDIIEPYGPEYMVILAGDHIYKMDYEWMLQQHVDSGADVTIGCL 161          

HSP 2 Score: 23.8682 bits (50), Expect = 5.345e-30
Identity = 7/17 (41.18%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLE 890
            FG+M +D++ R+++F+E
Sbjct:  171 FGVMHVDDKDRIIDFVE 187          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ENTS8 (Glucose-1-phosphate adenylyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=glgC PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.958e-30
Identity = 68/152 (44.74%), Postives = 94/152 (61.84%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            + +IL GG GTRL  LT  RAKPAV  G  +R+ID  +SNC+NS I +I V+TQ+ S +L +H+ R + S      NE FV++L AQQ      W++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  LP+
Sbjct:   21 VALILAGGRGTRLKDLTATRAKPAVHFGGKFRIIDFALSNCINSGIRRIGVITQYQSHTLVQHIQRGW-SFFSEEMNE-FVDLLPAQQRVHGETWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACLPV 170          

HSP 2 Score: 25.0238 bits (53), Expect = 6.958e-30
Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLE 890
            AFG+M +DE  ++++F+E
Sbjct:  177 AFGVMAVDENSKVIDFVE 194          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOP5 (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=glgC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 6.960e-30
Identity = 70/166 (42.17%), Postives = 101/166 (60.84%), Query Frame = 1
Query:  331 TCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            T ++P  +R  +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RHL   + +     +NE F ++L A Q   +  W+ GTADAV Q L + E ++   I++LAGDH+Y+MDYE+ +Q H +  A +TV  L +  K
Sbjct:    3 TGIEPPFARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQHGW-NFFRPERNESF-DILPASQRVSEELWYLGTADAVYQNLDIIESYDPQFIVLLAGDHIYKMDYEKMLQQHVQQGAHVTVGCLEVPRK 166          

HSP 2 Score: 23.8682 bits (50), Expect = 6.960e-30
Identity = 8/22 (36.36%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K  + FG+M +D   ++L+F+E
Sbjct:  166 KEASGFGVMHVDANDQILSFIE 187          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_ERWCT2.562e-3042.69Glucose-1-phosphate adenylyltransferase OS=Erwinia... [more]
GLGC_RHOP23.153e-3045.45Glucose-1-phosphate adenylyltransferase OS=Rhodops... [more]
GLGC_RHOE44.108e-3046.36Glucose-1-phosphate adenylyltransferase OS=Rhodoco... [more]
GLGC2_VIBVY4.108e-3040.99Glucose-1-phosphate adenylyltransferase 2 OS=Vibri... [more]
GLGC2_VIBVU4.108e-3040.99Glucose-1-phosphate adenylyltransferase 2 OS=Vibri... [more]
GLGC_RHOSR4.108e-3045.70Glucose-1-phosphate adenylyltransferase OS=Rhodoco... [more]
GLGC_RHOOB4.108e-3045.70Glucose-1-phosphate adenylyltransferase OS=Rhodoco... [more]
GLGC_RHITR5.345e-3042.68Glucose-1-phosphate adenylyltransferase OS=Rhizobi... [more]
GLGC_ENTS86.958e-3044.74Glucose-1-phosphate adenylyltransferase OS=Enterob... [more]
GLGC_RHOP56.960e-3042.17Glucose-1-phosphate adenylyltransferase OS=Rhodops... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
back to top