EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPS (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgC PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 9.062e-30
Identity = 70/154 (45.45%), Postives = 98/154 (63.64%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R  +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RHL R + +     +NE F ++L A Q   D  W++GTADAV Q + + E ++   I++LAGDH+Y+MDYE+ +Q H E  AD+TV  L
Sbjct:   10 ARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQRGW-NFFRPERNESF-DILPASQRVSDDMWYRGTADAVYQNIDIIESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGCL 161          

HSP 2 Score: 21.1718 bits (43), Expect = 9.062e-30
Identity = 8/19 (42.11%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M +D +  + +FLE
Sbjct:  169 SAFGVMDVDAKDVIRSFLE 187          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPT (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.062e-30
Identity = 69/154 (44.81%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R  +  +L GG G+RL  LT  RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RHL R + +     +NE F ++L A Q   +  W++GTADAV Q + + E ++   I++LAGDH+Y+MDYE+ +Q H E  AD+TV  L
Sbjct:   10 ARHAMAYVLAGGRGSRLMELTDWRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQRGW-NFFRPERNESF-DILPASQRVSEEMWYRGTADAVFQNIDIIESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGCL 161          

HSP 2 Score: 25.0238 bits (53), Expect = 9.062e-30
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            TAFG+M  D   R+++FLE
Sbjct:  169 TAFGVMHTDTTDRIISFLE 187          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPA (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris GN=glgC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.062e-30
Identity = 69/154 (44.81%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R  +  +L GG G+RL  LT  RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RHL R + +     +NE F ++L A Q   +  W++GTADAV Q + + E ++   I++LAGDH+Y+MDYE+ +Q H E  AD+TV  L
Sbjct:   10 ARHAMAYVLAGGRGSRLMELTDWRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQRGW-NFFRPERNESF-DILPASQRVSEEMWYRGTADAVFQNIDIIESYDPKFIVLLAGDHVYKMDYEKMLQQHVEQGADVTVGCL 161          

HSP 2 Score: 25.0238 bits (53), Expect = 9.062e-30
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            TAFG+M  D   R+++FLE
Sbjct:  169 TAFGVMHTDTTDRIISFLE 187          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_GRABC (Glucose-1-phosphate adenylyltransferase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=glgC PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 9.063e-30
Identity = 66/154 (42.86%), Postives = 95/154 (61.69%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +RS +  +L GG G+RL  LT  RAKPAV  G   R+ID  +SN +NS I +I V TQ+ + SL RH+ R + +     +NEGF ++L A Q   +  W++GTADAV Q L +   +    +++LAGDH+Y+MDYE  +  H E  AD+TV  +
Sbjct:    8 ARSTMAYVLAGGRGSRLLELTDTRAKPAVYFGGKSRIIDFALSNAVNSGIRRIGVATQYKAHSLIRHMQRGW-NFFRPERNEGF-DILPASQRVSETQWYEGTADAVYQNLDIIAGYEPEYMIILAGDHIYKMDYEIMLHQHVERQADVTVGCI 159          

HSP 2 Score: 27.7202 bits (60), Expect = 9.063e-30
Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLENQKE 902
            T FG+M++D+ GR+  FLE   +
Sbjct:  167 TGFGVMQVDDTGRITAFLEKPSD 189          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHEON (Glucose-1-phosphate adenylyltransferase OS=Shewanella oneidensis GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.271e-29
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I ++ V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + NW+QGTADAV Q + +        ++VL+GDH+YRMDY   + AH E+ AD+TV  L
Sbjct:   11 TRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGW----GHFKKELGESVEILPASQRYSE-NWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCL 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_EXIS2 (Glucose-1-phosphate adenylyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.271e-29
Identity = 63/152 (41.45%), Postives = 97/152 (63.82%), Query Frame = 1
Query:  349 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITV 804
            A ++V+ ++L GG G RL  LTK  AKPAV  G  YR+ID P+SNC NS I  + VLTQ+    LNR+L    A ++   +  G + +L   Q+    NW++GTA+A+ + +    +++   +LVL+GDH+Y+MDYE+ I+ HR+  AD+T+
Sbjct:    2 AKKNVVAMLLAGGEGKRLGALTKHTAKPAVAFGGKYRIIDFPLSNCTNSGIDTVGVLTQYEPLELNRYLGIGSAWDLD--RRNGGLTILPPYQAQNGKNWYEGTANAIYRNMSYINQYDPDYVLVLSGDHIYKMDYEKMIEEHRQGGADVTI 151          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CLOPS (Glucose-1-phosphate adenylyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.271e-29
Identity = 62/161 (38.51%), Postives = 101/161 (62.73%), Query Frame = 1
Query:  349 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            + + ++ +IL GG G+RL  LTK  AKPAVP G  YR+ID P+SNC NS I  + VLTQ+    LN H+      ++   + +G V +L   Q  +  +W++GTA+A+ Q +   E ++   +L+L+GDH+Y+MDY++ ++ H++ +AD T+  +  PM E
Sbjct:    2 SKKEIVAMILAGGQGSRLGVLTKNLAKPAVPFGGKYRIIDFPLSNCSNSGIYTVGVLTQYKPLKLNEHIGIGDTWDLD--RRDGGVSILPPYQKEKGGDWYKGTANAIYQNIEFIERYDPEYVLILSGDHIYKMDYDKMLEMHKQKEADATIAVINVPMHE 160          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CLOPE (Glucose-1-phosphate adenylyltransferase OS=Clostridium perfringens GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.271e-29
Identity = 62/161 (38.51%), Postives = 101/161 (62.73%), Query Frame = 1
Query:  349 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            + + ++ +IL GG G+RL  LTK  AKPAVP G  YR+ID P+SNC NS I  + VLTQ+    LN H+      ++   + +G V +L   Q  +  +W++GTA+A+ Q +   E ++   +L+L+GDH+Y+MDY++ ++ H++ +AD T+  +  PM E
Sbjct:    7 SKKEIVAMILAGGQGSRLGVLTKNLAKPAVPFGGKYRIIDFPLSNCSNSGIYTVGVLTQYKPLKLNEHIGIGDTWDLD--RRDGGVSILPPYQKEKGGDWYKGTANAIYQNIEFIERYDPEYVLILSGDHIYKMDYDKMLEMHKQKEADATIAVINVPMHE 165          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CLONN (Glucose-1-phosphate adenylyltransferase OS=Clostridium novyi (strain NT) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.271e-29
Identity = 68/159 (42.77%), Postives = 97/159 (61.01%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRE--TDADITVXALPMDE 825
            + +L +IL GG GTRL  LTK  AKPAVP G  YR+ID  +SNC NS I  I VLTQ+    LN H+      ++   +  G V +L      +  NW+ GTADA+ Q +   ++++   ILVL+GDH+Y+MDY + +Q H+E  +DA I V  +P++E
Sbjct:    4 KEMLAMILAGGQGTRLKILTKNNAKPAVPFGGKYRIIDFTLSNCSNSGIDTIGVLTQYEPHILNSHIGIGSPWDLD--RKRGGVSILPPHMRNDGGNWYMGTADAIYQNIMFIDKYDPEYILVLSGDHIYKMDYSKMLQFHKEKNSDATIAVIDVPIEE 160          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOS5 (Glucose-1-phosphate adenylyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=glgC PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.000e-29
Identity = 60/150 (40.00%), Postives = 96/150 (64.00%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN +NS I K+ + TQ+ + SL RH+ R +  N    +   ++++L A Q  ++  W+ GTADAV Q + + + +++  +++LAGDH+Y+MDYE  ++ H ET AD+T+  L
Sbjct:   14 MAFVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNAMNSGIRKMAIATQYKAHSLIRHIQRGW--NFFREERNEYLDILPASQRVDEHKWYLGTADAVTQNIDIVDSYDIKYVIILAGDHVYKMDYEIMLRQHCETGADVTIGCL 161          

HSP 2 Score: 24.6386 bits (52), Expect = 2.000e-29
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            TAFG+M +D   R+ +FLE
Sbjct:  169 TAFGVMHVDASLRITDFLE 187          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_RHOPS9.062e-3045.45Glucose-1-phosphate adenylyltransferase OS=Rhodops... [more]
GLGC_RHOPT9.062e-3044.81Glucose-1-phosphate adenylyltransferase OS=Rhodops... [more]
GLGC_RHOPA9.062e-3044.81Glucose-1-phosphate adenylyltransferase OS=Rhodops... [more]
GLGC_GRABC9.063e-3042.86Glucose-1-phosphate adenylyltransferase OS=Granuli... [more]
GLGC_SHEON1.271e-2945.51Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_EXIS21.271e-2941.45Glucose-1-phosphate adenylyltransferase OS=Exiguob... [more]
GLGC_CLOPS1.271e-2938.51Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_CLOPE1.271e-2938.51Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_CLONN1.271e-2942.77Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_RHOS52.000e-2940.00Glucose-1-phosphate adenylyltransferase OS=Rhodoba... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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