EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHESW (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain W3-18-1) GN=glgC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS + ++ V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + NW+QGTADAV Q + +        ++VL+GDH+YRMDY   + AH E+ AD+TV  L
Sbjct:   11 TRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGVRRVGVVTQYKSHSLIRHVMRGW----GHFKKELGESVEILPASQRFSE-NWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGILAAHAESGADMTVSCL 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHEPC (Glucose-1-phosphate adenylyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=glgC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS + ++ V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + NW+QGTADAV Q + +        ++VL+GDH+YRMDY   + AH E+ AD+TV  L
Sbjct:   11 TRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGVRRVGVVTQYKSHSLIRHVMRGW----GHFKKELGESVEILPASQRFSE-NWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGILAAHAESGADMTVSCL 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_LACS1 (Glucose-1-phosphate adenylyltransferase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=glgC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 67/157 (42.68%), Postives = 96/157 (61.15%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            +LG+IL GG GTRL  LT  +AKPAVP G  YR+ID  +SNC+NS +  I V+TQ+   +LN H+    +  +    N G V +L    + E   WF+GTA A+ Q +   ++ +   IL+L+GDH+Y+MDYE  +  H+ET A +TV  +  P DE
Sbjct:    5 MLGVILAGGKGTRLGKLTHNQAKPAVPFGGRYRIIDFTLSNCVNSGVKNIGVITQYQPLNLNAHIGNGASWGLDDL-NAG-VTILQPYSNNEGSKWFEGTAHAIYQNIGYIDQMDPEYILILSGDHIYKMDYEAMLDQHKETGASLTVAVIDVPWDE 159          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_EUBE2 (Glucose-1-phosphate adenylyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgC PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.169e-29
Identity = 62/155 (40.00%), Postives = 98/155 (63.23%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            + ++ ++L GG G+RL  LT K AKPAV  G  YR+ID P+SNC+NS I  + VLTQ+    LN H+      ++   +N G V VL   +  ++  W+ GTA+A+ Q L   E+++   +L+L+GDH+Y+MDY+  +  H+  +ADIT+ A+P+
Sbjct:    4 KEMIAMLLAGGQGSRLGVLTSKVAKPAVAFGGKYRIIDFPLSNCINSGIDTVGVLTQYQPLRLNTHIGIGIPWDLD--RNVGGVSVLPPYEKSQNSEWYTGTANAIYQNLEYMEQYHPEYVLILSGDHIYKMDYKIMLDYHKANNADITIAAMPV 156          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHIEC (Glucose-1-phosphate adenylyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgC PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.604e-29
Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R  +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RH+ R + +     +NE F ++L A Q   +  W++GTADAV Q + + E++ V  +++LAGDH+Y+MDYE  +Q H ++ AD+T+  L
Sbjct:   10 ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHMQRGW-NFFRPERNESF-DILPASQRVSETQWYEGTADAVYQNIDIIEDYGVEYMVILAGDHVYKMDYEYMLQQHVDSGADVTIGCL 161          

HSP 2 Score: 21.557 bits (44), Expect = 2.604e-29
Identity = 7/19 (36.84%), Postives = 13/19 (68.42%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            T FG+M ++E+  +  F+E
Sbjct:  169 TGFGVMHVNEKDEIFAFIE 187          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC2_PSEA6 (Glucose-1-phosphate adenylyltransferase 2 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=glgC2 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.604e-29
Identity = 67/158 (42.41%), Postives = 98/158 (62.03%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I +I V+TQ+ S SL RHL R +    G ++ E    VE+L A Q     NW++GTADAV Q + +  +     +++L+GDH+Y MDY   +  H E+ A +TV  +P+
Sbjct:   13 TRDTYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIKRIGVVTQYKSHSLIRHLVRGW----GHFRKELGESVEILPASQR-SSGNWYEGTADAVFQNIDIIRDEIPKYVMILSGDHIYSMDYANILAHHVESGAKMTVSCMPV 165          

HSP 2 Score: 25.409 bits (54), Expect = 2.604e-29
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLE 890
            AFG+M +DE+ R+L F E
Sbjct:  173 AFGVMSVDEDYRILGFEE 190          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ANADF (Glucose-1-phosphate adenylyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgC PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.605e-29
Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            +L +IL GG G RL PLT++RAKPAVP G  YR++D  +SN  NS + K+ VL Q+ S SLN H+ R +         + +VE++ AQ     P WF+G+ADA+ Q L +  +       +   DH+YRMD  + +Q H++  AD+TV A+P+
Sbjct:    4 LLAMILAGGEGRRLDPLTRERAKPAVPFGGRYRIVDFVLSNFANSGVLKMKVLVQYKSESLNAHIQRGWRLTA---LLDQYVEIVPAQMR-VGPKWFEGSADAIYQNLNIITDEEPEFTFIFGADHVYRMDVRQMLQFHQDKGADLTVAAIPV 152          

HSP 2 Score: 26.9498 bits (58), Expect = 2.605e-29
Identity = 10/28 (35.71%), Postives = 19/28 (67.86%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLENQKETL*GMKG 923
            FG++++D +GR++ F+E  K  +  M G
Sbjct:  160 FGIIEVDGDGRMIGFVEKPKAGVKTMPG 187          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBPA (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio parahaemolyticus GN=glgC1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.606e-29
Identity = 66/156 (42.31%), Postives = 97/156 (62.18%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            VLG+IL GG G+RL PLT+ R+KP+VP G +YRLID  ++N +N+++ +IYVLTQF S SL  HL + +  N+ G   + F++ + AQ       W++GTADA+ Q L   E      + +   DH+Y+MD ++ +  H E  A +TV AL M  K
Sbjct:    4 VLGMILAGGEGSRLRPLTESRSKPSVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLFHHLKKGW--NINGI-TDRFIDPIPAQMR-TGKRWYEGTADAIYQNLRFMELEEPDQVCIFGSDHIYKMDIKQMLNFHTEKKASLTVSALRMPLK 155          

HSP 2 Score: 25.7942 bits (55), Expect = 2.606e-29
Identity = 9/22 (40.91%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K  + FG++++D EGR++ F E
Sbjct:  155 KEASQFGVIEVDAEGRMIGFEE 176          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_MYCSS (Glucose-1-phosphate adenylyltransferase OS=Mycobacterium sp. (strain MCS) GN=glgC PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.606e-29
Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            VLGI+L GG G RLYPLT  RAKPAVP G  YRLID  +SN +N+   +I VLTQ+ S SL+RH+S+ +   + G   E    V A Q+    P W+ G+ADA+ Q + L  + +   I+V   DH+YRMD E+ +Q H E+ A  TV  +
Sbjct:    7 VLGIVLAGGEGKRLYPLTADRAKPAVPFGGAYRLIDFVLSNLVNARYLRICVLTQYKSHSLDRHISQNW--RLSGLAGEYITPVPAQQRL--GPRWYTGSADAIYQSMNLIYDEDPDYIVVFGADHVYRMDPEQMVQFHIESGAGATVAGI 153          

HSP 2 Score: 26.1794 bits (56), Expect = 2.606e-29
Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            TAFG++  DE GR+ +F+E
Sbjct:  161 TAFGVIDADESGRIRSFVE 179          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CLOB8 (Glucose-1-phosphate adenylyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glgC PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.833e-29
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            ++ +IL GG G+RL  LTKK AKPAVP G  YR+ID P+SNC NS I  + VLTQ+    LN H+    A ++   +  G V VL   Q  +   W++GTA+A+ Q +   + ++   IL+L+GDH+Y+MDY + +  H+E  A+ T+  +  PMDE
Sbjct:    6 IVAMILAGGQGSRLGVLTKKLAKPAVPFGGKYRIIDFPLSNCSNSGIYTVGVLTQYKPLELNAHIGIGEAWDLD--RAHGGVHVLPPYQEEKGGEWYKGTANAIYQNIEFVDRYDPEYILILSGDHIYKMDYTKMLDFHKEKQAEATIAVIEVPMDE 160          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_SHESW2.169e-2944.87Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_SHEPC2.169e-2944.87Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_LACS12.169e-2942.68Glucose-1-phosphate adenylyltransferase OS=Lactoba... [more]
GLGC_EUBE22.169e-2940.00Glucose-1-phosphate adenylyltransferase OS=Eubacte... [more]
GLGC_RHIEC2.604e-2942.86Glucose-1-phosphate adenylyltransferase OS=Rhizobi... [more]
GLGC2_PSEA62.604e-2942.41Glucose-1-phosphate adenylyltransferase 2 OS=Pseud... [more]
GLGC_ANADF2.605e-2941.18Glucose-1-phosphate adenylyltransferase OS=Anaerom... [more]
GLGC1_VIBPA2.606e-2942.31Glucose-1-phosphate adenylyltransferase 1 OS=Vibri... [more]
GLGC_MYCSS2.606e-2945.70Glucose-1-phosphate adenylyltransferase OS=Mycobac... [more]
GLGC_CLOB82.833e-2942.04Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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