EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_PASMU (Glucose-1-phosphate adenylyltransferase OS=Pasteurella multocida GN=glgC PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.389e-29
Identity = 68/162 (41.98%), Postives = 103/162 (63.58%), Query Frame = 1
Query:  346 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNV-LGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            E  +  L +IL GG G+RLY LT KRAKPA+  G N R+ID  +SNCLNS +++I V+TQ+ + SL RHL   + S +   + E F+++L A+Q  +D  W++GTADAV Q + +  +H     IL+LAGDH+Y+ DY + +  H  + A  TV  + ++ +
Sbjct:   17 ELVKDTLVLILAGGRGSRLYELTDKRAKPALYFGGNRRIIDFALSNCLNSGLNRIGVVTQYAAHSLLRHLQNGW-SFLPAERGE-FIDMLPARQQIDDSTWYRGTADAVYQNMAIIRDHYCPKYILILAGDHIYKQDYSQMLLDHIHSGAKCTVGCIEVERE 176          

HSP 2 Score: 23.0978 bits (48), Expect = 3.389e-29
Identity = 8/26 (30.77%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLENQKE 902
            ++ T FG+M ++E  ++ +F+E  K+
Sbjct:  176 EKATEFGVMAVNENLKVKSFVEKPKD 201          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHIE6 (Glucose-1-phosphate adenylyltransferase OS=Rhizobium etli (strain CIAT 652) GN=glgC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.391e-29
Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R  +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RH+ R + +     +NE F ++L A Q   +  W++GTADAV Q + + E++ V  +++LAGDH+Y+MDYE  +Q H ++ AD+T+  L
Sbjct:   10 ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHMQRGW-NFFRPERNESF-DILPASQRVSETQWYEGTADAVYQNIDIIEDYGVEYMVILAGDHVYKMDYEWMLQQHVDSGADVTIGCL 161          

HSP 2 Score: 21.557 bits (44), Expect = 3.391e-29
Identity = 7/19 (36.84%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            T FG+M ++++  +L F+E
Sbjct:  169 TGFGVMHVNDKDEILAFVE 187          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_GEMAT (Glucose-1-phosphate adenylyltransferase OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=glgC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.415e-29
Identity = 67/159 (42.14%), Postives = 99/159 (62.26%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            +R+ +  +L GG G+RLY LT  RAKPAV  G   R+ID  +SN +NS I +I V TQ+ + SL RHL R + + M   +NE F ++L A Q   +  W+ GTADAV Q   +  ++    +++LAGDH+Y+MDYE  +Q H   +AD+TV  L + ++
Sbjct:   10 ARTAMAYVLAGGRGSRLYELTDPRAKPAVYFGGKTRIIDFALSNAINSGIRRIGVATQYKAHSLIRHLQRGW-NFMRPERNESF-DILPASQRVSETQWYDGTADAVYQNGDIIADYAPEYMVILAGDHVYKMDYELMLQQHVNQNADVTVGVLEVPQR 166          

HSP 2 Score: 23.8682 bits (50), Expect = 4.415e-29
Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            +  + FG+M +D   R++ FLE
Sbjct:  166 REASGFGVMHVDANDRIITFLE 187          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHORU (Glucose-1-phosphate adenylyltransferase OS=Rhodospirillum rubrum GN=glgC PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 65/154 (42.21%), Postives = 95/154 (61.69%), Query Frame = 1
Query:  349 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITV 804
            A +  L ++L GG G+RL  LT + +KPAVP G  YR+ID P+SNC+NS I ++ V+TQ+ + +L  H+ R +    G  + E   FVE+  AQQ  +  +W+ GTADAV Q L L   H+   +L+LAGDH+Y+ DY + +  H    +D TV
Sbjct:   14 ALKETLALVLAGGRGSRLRDLTNRESKPAVPFGGKYRIIDFPLSNCMNSGIRRMCVITQYRAHTLIHHIQRGW----GFLRAEIGEFVELWPAQQQTDKESWYLGTADAVHQNLDLIRMHDPRFVLILAGDHIYKQDYSKLLAHHIARGSDCTV 163          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHORT (Glucose-1-phosphate adenylyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glgC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 65/154 (42.21%), Postives = 95/154 (61.69%), Query Frame = 1
Query:  349 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITV 804
            A +  L ++L GG G+RL  LT + +KPAVP G  YR+ID P+SNC+NS I ++ V+TQ+ + +L  H+ R +    G  + E   FVE+  AQQ  +  +W+ GTADAV Q L L   H+   +L+LAGDH+Y+ DY + +  H    +D TV
Sbjct:   14 ALKETLALVLAGGRGSRLRDLTNRESKPAVPFGGKYRIIDFPLSNCMNSGIRRMCVITQYRAHTLIHHIQRGW----GFLRAEIGEFVELWPAQQQTDKESWYLGTADAVHQNLDLIRMHDPRFVLILAGDHIYKQDYSKLLAHHIARGSDCTV 163          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHILW (Glucose-1-phosphate adenylyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=glgC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R  +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RH+ R + +     +NE F ++L A Q   +  W++GTADAV Q + + E++ V  +++LAGDH+Y+MDYE  +Q H ++ AD+T+  L
Sbjct:   10 ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHMQRGW-NFFRPERNESF-DILPASQRVSETQWYEGTADAVYQNIDIIEDYGVEYMVILAGDHVYKMDYEWMLQQHVDSGADVTIGCL 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CLOBB (Glucose-1-phosphate adenylyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glgC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 62/157 (39.49%), Postives = 100/157 (63.69%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            ++ +IL GG G+RL  LTKK AKPAVP G  YR+ID P+SNC NS I  + VLTQ+    LN H+      ++   + +G V +L   Q  +  NW++GTA+A+ Q +   + ++   +L+L+GDH+Y+M+Y + ++ H+E +AD T+  +  P++E
Sbjct:    6 IVAMILAGGQGSRLGVLTKKLAKPAVPFGGKYRIIDFPLSNCANSGIYTVGVLTQYKPLELNAHIGIGLPWDLD--RKDGGVSILPPYQEEKGGNWYKGTANAIYQNIEFVDRYDPEYVLILSGDHIYKMNYTKMLEFHKEKNADATIGVIEVPVNE 160          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CLOBA (Glucose-1-phosphate adenylyltransferase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=glgC PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.832e-29
Identity = 62/157 (39.49%), Postives = 100/157 (63.69%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            ++ +IL GG G+RL  LTKK AKPAVP G  YR+ID P+SNC NS I  + VLTQ+    LN H+      ++   + +G V +L   Q  +  NW++GTA+A+ Q +   + ++   +L+L+GDH+Y+M+Y + ++ H+E +AD T+  +  P++E
Sbjct:    6 IVAMILAGGQGSRLGVLTKKLAKPAVPFGGKYRIIDFPLSNCANSGIYTVGVLTQYKPLELNAHIGIGLPWDLD--RKDGGVSILPPYQEEKGGNWYKGTANAIYQNIEFVDRYDPEYVLILSGDHIYKMNYTKMLEFHKEKNADATIGVIEVPVNE 160          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBCH (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio cholerae GN=glgC1 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 5.751e-29
Identity = 65/153 (42.48%), Postives = 98/153 (64.05%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VLG+IL GG G+RL PLT+ R KPAVP G +YRLID  ++N +N+++ +IYVLTQF S SL  H+ + +  N+ G   + F++++ AQ   +   W++GTADA+ Q L   E      + +   DH+Y+MD  + +  HR  +A++TV AL M
Sbjct:    4 VLGMILAGGEGSRLKPLTETRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLYIHMKKGW--NLSGI-TDRFIDIIPAQMR-DGKRWYEGTADAIYQNLRFVEIVAPDQVCIFGSDHIYKMDIRQMLDFHRRMEAELTVSALRM 152          

HSP 2 Score: 23.0978 bits (48), Expect = 5.751e-29
Identity = 7/17 (41.18%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLE 890
            FG++++DE G+++ F E
Sbjct:  160 FGVIEVDENGKMVGFEE 176          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBVY (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio vulnificus (strain YJ016) GN=glgC1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.751e-29
Identity = 65/153 (42.48%), Postives = 97/153 (63.40%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VLG+IL GG G+RL PLT+ R+KPAVP G +YRLID  ++N +N+++ +IYVLTQF S SL  H+ + +  N+ G   + F++ + AQ       W++GTADA+ Q L   E      + +   DH+Y+MD ++ +  H+E  A +TV AL M
Sbjct:    4 VLGMILAGGEGSRLRPLTESRSKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLFHHMKKGW--NINGI-TDRFIDPIPAQMR-TGKRWYEGTADAIYQNLRFMELSEPEQVCIFGSDHIYKMDIKQMLSFHKEKQAALTVSALRM 152          

HSP 2 Score: 23.8682 bits (50), Expect = 5.751e-29
Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLE 890
            FG++++D EGR++ F E
Sbjct:  160 FGVIEVDAEGRMVGFEE 176          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_PASMU3.389e-2941.98Glucose-1-phosphate adenylyltransferase OS=Pasteur... [more]
GLGC_RHIE63.391e-2942.86Glucose-1-phosphate adenylyltransferase OS=Rhizobi... [more]
GLGC_GEMAT4.415e-2942.14Glucose-1-phosphate adenylyltransferase OS=Gemmati... [more]
GLGC_RHORU4.832e-2942.21Glucose-1-phosphate adenylyltransferase OS=Rhodosp... [more]
GLGC_RHORT4.832e-2942.21Glucose-1-phosphate adenylyltransferase OS=Rhodosp... [more]
GLGC_RHILW4.832e-2942.86Glucose-1-phosphate adenylyltransferase OS=Rhizobi... [more]
GLGC_CLOBB4.832e-2939.49Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_CLOBA4.832e-2939.49Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC1_VIBCH5.751e-2942.48Glucose-1-phosphate adenylyltransferase 1 OS=Vibri... [more]
GLGC1_VIBVY5.751e-2942.48Glucose-1-phosphate adenylyltransferase 1 OS=Vibri... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
back to top