EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPB (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgC PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.398e-28
Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            +R  +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RHL   + +     +NE F ++L A Q   +  W+ GTADAV Q + + E ++   I++LAGDH+Y+MDYE+ +Q H E  AD+TV  L +  +
Sbjct:   10 ARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQHGW-NFFRPERNESF-DILPASQRVSEELWYLGTADAVYQNIDIIESYDPQFIVLLAGDHIYKMDYEQMLQQHVEQGADVTVGCLEVPRR 166          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHEAM (Glucose-1-phosphate adenylyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=glgC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.132e-28
Identity = 68/153 (44.44%), Postives = 98/153 (64.05%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITV 804
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I +I V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + +W+QGTADAV Q + +        +++L+GDH+YRMDY   + AH ++ AD+TV
Sbjct:   13 TRETYALILAGGRGSRLFELTDWRAKPALYFGGKFRVIDFPLSNCVNSGIRRIGVVTQYQSHSLIRHVMRGW----GHFKRELGESVEILPASQRYSE-SWYQGTADAVFQNIDIIRHELPRYVMILSGDHVYRMDYAGMLAAHAQSGADMTV 160          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_OCEIH (Glucose-1-phosphate adenylyltransferase OS=Oceanobacillus iheyensis GN=glgC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.132e-28
Identity = 60/158 (37.97%), Postives = 95/158 (60.13%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDEKG 831
            +G++L GG G RL  LTK+ AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    LN+H+      +M      G V +L      +  +W+ GTADA+ Q +    ++    +L+++GDH+Y+MDY++ ++ H+ T+AD+T+  +  P  E G
Sbjct:    5 IGMLLAGGEGKRLGMLTKQGAKPAVPFGGKYRIIDFTLSNCTNSGIQTVGILTQYAPLELNKHIGNGKPWDMN--HQHGGVSILPPYTGTKGGDWYSGTADAIYQNMNFIHQYEPEYVLIISGDHIYQMDYQQMLEQHKRTNADVTISVIEVPWAEAG 160          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_LEIXX (Glucose-1-phosphate adenylyltransferase OS=Leifsonia xyli subsp. xyli GN=glgC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.132e-28
Identity = 65/155 (41.94%), Postives = 97/155 (62.58%), Query Frame = 1
Query:  349 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            A + + GI+L GG G RL PLT  RAKPAVP G  YRLID  +SN +NS + +I VLTQ+ S SL+RH+S+ +  +  G  N     V A Q+  +   WF G+ADA+ Q + L  +     ++V+  DH+YRMD+ + I++H ++ + +TV A+
Sbjct:    3 AGKKIFGIVLAGGEGKRLMPLTTDRAKPAVPFGGQYRLIDFALSNLINSQLRQIVVLTQYKSHSLDRHISQTWRPD--GMLNSYIASVPAQQRLGK--RWFSGSADAILQSINLLRDEKPDIVVVVGADHVYRMDFGQMIRSHLDSGSSVTVAAI 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_LACPL (Glucose-1-phosphate adenylyltransferase OS=Lactobacillus plantarum GN=glgC PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.132e-28
Identity = 65/151 (43.05%), Postives = 92/151 (60.93%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +LGIIL GG GTRL  LTK  AKPAVP G  YR+ID  +SNC NS ++ + V+TQ+    LN H+     ++ G     G V VL    S E   +FQGTA A+ Q +   ++ +   +LVL+GDH+Y+MDY+  ++ H+E  A +TV  +
Sbjct:    5 MLGIILAGGQGTRLGKLTKDTAKPAVPFGGRYRIIDFTLSNCANSGVNTVGVITQYQPLELNAHIGS--GASWGFDSLNGGVTVLQPYSSSEGEKFFQGTAHAIYQNIEYIDQQDPKYLLVLSGDHIYKMDYDAMLKYHQEKKASLTVGVI 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ANADE (Glucose-1-phosphate adenylyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.645e-28
Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            +L +IL GG G RL PLT+ RAKPAVP G  YR++D  +SN  NS I K+ V+ Q+ S SLN H+ RA+   +    N+ +VE++ AQ     P WF+G+ADA+ Q L +  +       V   DH+YRMD  + +  H++  AD+TV A+P+
Sbjct:    4 LLAMILAGGEGRRLDPLTRDRAKPAVPFGGRYRIVDFVLSNMANSGILKMKVVVQYKSESLNTHVQRAW--RLTSLLNQ-YVELVPAQMR-VGPKWFEGSADAIYQNLNIITDEEPDFTFVFGADHVYRMDARQMLAFHQDRKADLTVAAVPI 152          

HSP 2 Score: 25.7942 bits (55), Expect = 3.645e-28
Identity = 8/17 (47.06%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLE 890
            FG++++D EGR++ F+E
Sbjct:  160 FGIIEVDAEGRMVGFVE 176          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CORK4 (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.645e-28
Identity = 66/156 (42.31%), Postives = 95/156 (60.90%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            VL I+L GG G RL+P T  RAKPAVP G +YRLID  +SN +N+   K+ VLTQ+ S SL+RH+S+++   + G   E    V A Q+  +   WF G+ADA+ Q L L  + +   I+V   DH+YRMD E+ ++ H E+ A  +V  + +  K
Sbjct:    7 VLSIVLAGGEGKRLFPFTADRAKPAVPFGGSYRLIDFVLSNLVNAGYMKVCVLTQYKSHSLDRHISQSW--QLSGLAGEYITPVPAQQRLGK--RWFTGSADAILQSLNLIYDEDPEYIIVFGADHVYRMDPEQMVKEHIESGAACSVAGIRVPRK 158          

HSP 2 Score: 26.1794 bits (56), Expect = 3.645e-28
Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K  TAFG ++ D++G +  FLE
Sbjct:  158 KEATAFGCIQADDDGTITEFLE 179          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_PHOPR (Glucose-1-phosphate adenylyltransferase OS=Photobacterium profundum GN=glgC PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.646e-28
Identity = 66/153 (43.14%), Postives = 95/153 (62.09%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VLG+IL GG G+RL PLT  R KPAVP G +YRLID  ++N +N++  KIYVLTQF S SL  H+ + +  N+ G   + F++ + AQ       W+ GTADA+ Q L   E      + +   DH+Y+MD ++ +  H+E +A++TV AL M
Sbjct:    4 VLGMILAGGEGSRLRPLTDSRTKPAVPFGGSYRLIDFALNNFVNADFLKIYVLTQFKSQSLYVHMKKGW--NITGI-TDRFIDPIPAQMR-MGKRWYDGTADAIYQNLSFIELAEPEHVCIFGSDHIYKMDIKQMLNFHKEKEAELTVSALRM 152          

HSP 2 Score: 23.0978 bits (48), Expect = 3.646e-28
Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG++++DE G ++ F E
Sbjct:  158 SAFGVIEVDENGCMVGFEE 176          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THERP (Glucose-1-phosphate adenylyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=glgC PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.090e-28
Identity = 64/151 (42.38%), Postives = 88/151 (58.28%), Query Frame = 1
Query:  370 IILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMD 822
            +IL GG G RL  L+++RAKPAVP G  YR+ID  +SNC+NS +  + VLTQ+   SLN H+      ++   +N G V +L          W++GTADAV   L+         +L+LAGDH+Y MDY   I  HRE  AD+T+   P+D
Sbjct:    7 MILAGGQGERLSILSRQRAKPAVPFGGKYRIIDFALSNCVNSGLYDVAVLTQYRPHSLNEHIGHGRPWDLDRERNGGVV-ILQPYLGRSTSGWYRGTADAVYHNLFYITRRPYRDVLILAGDHVYAMDYRPMIAQHRERCADVTIAVQPVD 156          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_NOVAD (Glucose-1-phosphate adenylyltransferase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=glgC PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.090e-28
Identity = 66/154 (42.86%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R  +  +L GG G+RL  LT  RAKPAV  G   R+ID  +SN +NS I +I V TQ+ + SL RH+ RA+ + M   +NE F ++L A Q   +  W++GTADAV Q L +   +    +++LAGDH+Y+MDYE  ++ H E+ AD+T+  L
Sbjct:   10 ARDAMAYVLAGGRGSRLKELTDNRAKPAVYFGGKSRIIDFALSNAINSGIRRIGVATQYKAHSLIRHMQRAW-NFMRPERNESF-DILPASQRVSEHQWYEGTADAVYQNLDIIASYAPKYMVILAGDHIYKMDYELMLRQHVESGADVTIGCL 161          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_RHOPB2.398e-2842.77Glucose-1-phosphate adenylyltransferase OS=Rhodops... [more]
GLGC_SHEAM3.132e-2844.44Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_OCEIH3.132e-2837.97Glucose-1-phosphate adenylyltransferase OS=Oceanob... [more]
GLGC_LEIXX3.132e-2841.94Glucose-1-phosphate adenylyltransferase OS=Leifson... [more]
GLGC_LACPL3.132e-2843.05Glucose-1-phosphate adenylyltransferase OS=Lactoba... [more]
GLGC_ANADE3.645e-2842.48Glucose-1-phosphate adenylyltransferase OS=Anaerom... [more]
GLGC_CORK43.645e-2842.31Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_PHOPR3.646e-2843.14Glucose-1-phosphate adenylyltransferase OS=Photoba... [more]
GLGC_THERP4.090e-2842.38Glucose-1-phosphate adenylyltransferase OS=Thermom... [more]
GLGC_NOVAD4.090e-2842.86Glucose-1-phosphate adenylyltransferase OS=Novosph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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