EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_STRGC (Glucose-1-phosphate adenylyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=glgC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.906e-27
Identity = 62/156 (39.74%), Postives = 94/156 (60.26%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            +L +IL GG GTRL  LT+  AKPAV  G  YR+ID  +SNC NS I  + V+TQ+   +LN H+    +  + G  N G V +L    + E   WF+GT+ A+ Q +   +  N   +L+L+GDH+Y+MDY+  +Q+H++ +A +TV  L +  K
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVITQYQPLALNSHIGNGSSWGLDGI-NTG-VSILQPYSASEGNRWFEGTSHAIFQNIDYIDSINPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLK 158          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_MANSM (Glucose-1-phosphate adenylyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=glgC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.906e-27
Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEH-NVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  L +IL GG G+RL+ LT KRAKPA+  G N R+ID  +SNC+NS +++I V+TQ+ + SL RHL   + S +   + E FV++L A+Q  +D  W++GTAD+V Q L +   H     +L+LAGDH+Y+MDY + +  H  + A  TV  +
Sbjct:   16 KDTLVLILAGGRGSRLHELTDKRAKPALYFGGNRRIIDFALSNCINSGLNRIGVITQYAAHSLLRHLQTGW-SFLPQERGE-FVDMLPARQQIDDNTWYRGTADSVYQNLAIIRGHYKPKYVLILAGDHIYKMDYSQMLLDHVSSGAKCTVGCI 167          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_FRASN (Glucose-1-phosphate adenylyltransferase OS=Frankia sp. (strain EAN1pec) GN=glgC PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.906e-27
Identity = 70/155 (45.16%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY-ASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            S  VLG++L GGAG RL PLT  RAKPAVP G  YRL+D  +SN +N    +I VLTQ+ S SL+RH++  +  SN+ G     +V  + AQQ    P WF G+ADA+ Q L L  +     ++V   DH+YRMD  + +  H ET A +TV  L
Sbjct:    3 SPRVLGLVLAGGAGKRLAPLTADRAKPAVPFGGIYRLVDFVLSNLVNGGYLRIAVLTQYKSHSLDRHITTTWRMSNLLG----NYVTPVPAQQR-LGPQWFAGSADAIHQSLNLVHDEAPDVVVVFGADHVYRMDPRQMVAQHLETGAGVTVAGL 152          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_COREF (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium efficiens GN=glgC PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 6.633e-27
Identity = 63/152 (41.45%), Postives = 92/152 (60.53%), Query Frame = 1
Query:  358 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +VL I+L GG G RL+PLT+ RAKPAVP G  YRLID  +SN +N+   KI VLTQ+ S SL+RH+S ++  N+ G   +    V A Q+  +   WF G+ADA+ Q L L  +     ++V   DH+YRMD  + +  H ++   ++V  +
Sbjct:   10 NVLAIVLAGGEGKRLFPLTEDRAKPAVPFGGTYRLIDFVLSNLVNAGYLKIAVLTQYKSHSLDRHISVSW--NVSGPTGQYIASVPAQQRLGK--RWFTGSADAILQSLNLISDEKPDYVIVFGADHVYRMDPSQMVDEHIKSGKSVSVAGI 157          

HSP 2 Score: 25.7942 bits (55), Expect = 6.633e-27
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            TAFG ++ D+EG +  FLE
Sbjct:  165 TAFGCIQSDDEGNITEFLE 183          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_LACAC (Glucose-1-phosphate adenylyltransferase OS=Lactobacillus acidophilus GN=glgC PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.641e-27
Identity = 61/160 (38.12%), Postives = 89/160 (55.62%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            S  +LG+IL GG GTRL  LT  +AKPAVP G  YR+ID  +SNC NS +  I ++TQ+    LN H+    +  + G        +L          WF+GTA A+ Q +   +  +   +L+L+GDH+Y+MDYE  ++ H +  A +TV  +  PM E
Sbjct:    2 STEMLGLILAGGKGTRLGKLTSDQAKPAVPFGGRYRIIDFTLSNCANSGVKNIGIITQYQPLLLNEHIGNGVSWGLDGL--NASATILQPYTDNSGSKWFEGTAHAIYQNIDYIDSKDPEYVLILSGDHIYKMDYESMLEEHIKNGASLTVAVIDVPMKE 159          

HSP 2 Score: 22.3274 bits (46), Expect = 6.641e-27
Identity = 9/22 (40.91%), Postives = 12/22 (54.55%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K  + FG+M  D  GR+  F E
Sbjct:  158 KEASRFGIMNTDVSGRITEFEE 179          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_STRA3 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype III GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.007e-26
Identity = 62/156 (39.74%), Postives = 91/156 (58.33%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            +L +IL GG GTRL  LT+  AKPAV  G  YR+ID  +SNC NS I+ + V+TQ+    LN H+    +  + G   +  V VL    + E   WFQGT+ A+ Q +   +  N   +L+L+GDH+Y+MDY+  +Q H++  A +TV  L +  K
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGINNVGVITQYQPLELNTHIGNGSSWGLDGI--DSGVTVLQPYSATEGNRWFQGTSHAIYQNIDYIDRINPEYVLILSGDHIYKMDYDDMLQTHKDNLASLTVAVLDVPLK 158          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BIFAA (Glucose-1-phosphate adenylyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.007e-26
Identity = 64/153 (41.83%), Postives = 97/153 (63.40%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRA--YASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +L I+L GG GTRL PLT+ RAKPAVP G  +RLID P+SN +NS   +  VLTQ+ S SL+RH+S    ++  +G Y     V  + AQQ     +W+ G+ADA+ Q + + E+     ++++  DH+YRMD+++ +Q H E+ A+ TV  +
Sbjct:    7 ILSIVLAGGEGTRLMPLTRDRAKPAVPFGGVFRLIDFPLSNLVNSGYMQTVVLTQYKSHSLDRHISTVWRFSPLLGNY-----VSPVPAQQR-LGKHWYLGSADAIYQTINIIEDVQPDIVVIVGADHVYRMDFQQMVQQHIESGAEFTVAGI 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_HAEI8 (Glucose-1-phosphate adenylyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=glgC PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.316e-26
Identity = 64/154 (41.56%), Postives = 99/154 (64.29%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEH-NVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            ++ L ++L GG G+RL+ LT KRAKPA+  G N R+ID  +SNC+NS +++I V+TQ+ + SL RHL   + S +   + E FV++L A+Q  +D  W++GTADAV Q + + + H     IL+LAGDH+Y+ DY   +  H  + A  T+  +
Sbjct:   17 KNTLVLVLAGGRGSRLHELTDKRAKPALYFGGNRRIIDFALSNCINSGLNRIGVVTQYAAHSLLRHLQTGW-SFLPQERGE-FVDMLPARQQIDDSTWYRGTADAVYQNMAIIKNHYRPKYILILAGDHIYKQDYSVMLMDHVNSGAKCTIGCI 168          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CORA7 (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.316e-26
Identity = 65/152 (42.76%), Postives = 93/152 (61.18%), Query Frame = 1
Query:  358 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +VL I+L GG G RL+PLT+ RAKPAVP G +YRLID  +SN +N+   KI VLTQ+ S SL+RH+S+A+  N+ G   +    V A Q+      W+ G+ADA+ Q L L  +     ++V   DH+YRMD  + ++ H  T  D +V  +
Sbjct:    6 NVLAIVLAGGEGKRLFPLTEDRAKPAVPFGGSYRLIDFVLSNLVNAGFLKIAVLTQYKSHSLDRHISQAW--NLSGPTPQYIASVPAQQR--RGKRWYNGSADAILQSLNLIYDEKPDYVIVFGADHVYRMDPAQMVEEHIATGLDCSVAGI 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THESQ (Glucose-1-phosphate adenylyltransferase OS=Thermotoga sp. (strain RQ2) GN=glgC PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.462e-26
Identity = 63/158 (39.87%), Postives = 97/158 (61.39%), Query Frame = 1
Query:  358 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + + +IL GG GTRL  LT++ AKPAVP G  YRLID  +SNC+NS I ++ VLTQ+    L++H+      ++   + +G VE+L       + +W++GTA+AV Q L   EE++   +L+L+GDH+Y M+Y   I  H  +E D  I    +P++E
Sbjct:    3 NTVAMILAGGQGTRLGVLTERIAKPAVPFGGKYRLIDFTLSNCVNSGIYRVGVLTQYRPHVLSKHIGIGRPWDLD--RKDGGVEILPPYVGRHESDWYKGTANAVYQNLEFLEENDAELVLILSGDHVYAMNYNDLIDYHLLKEADGTIACMEVPIEE 158          

HSP 2 Score: 21.557 bits (44), Expect = 1.462e-26
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLE 890
            FG+M  D +GR+++F E
Sbjct:  162 FGIMITDVDGRIVDFEE 178          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_STRGC5.906e-2739.74Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_MANSM5.906e-2742.86Glucose-1-phosphate adenylyltransferase OS=Mannhei... [more]
GLGC_FRASN5.906e-2745.16Glucose-1-phosphate adenylyltransferase OS=Frankia... [more]
GLGC_COREF6.633e-2741.45Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_LACAC6.641e-2738.13Glucose-1-phosphate adenylyltransferase OS=Lactoba... [more]
GLGC_STRA31.007e-2639.74Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_BIFAA1.007e-2641.83Glucose-1-phosphate adenylyltransferase OS=Bifidob... [more]
GLGC_HAEI81.316e-2641.56Glucose-1-phosphate adenylyltransferase OS=Haemoph... [more]
GLGC_CORA71.316e-2642.76Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_THESQ1.462e-2639.87Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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