EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THEMA (Glucose-1-phosphate adenylyltransferase OS=Thermotoga maritima GN=glgC PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.462e-26
Identity = 63/158 (39.87%), Postives = 97/158 (61.39%), Query Frame = 1
Query:  358 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + + +IL GG GTRL  LT++ AKPAVP G  YRLID  +SNC+NS I ++ VLTQ+    L++H+      ++   + +G VE+L       + +W++GTA+AV Q L   EE++   +L+L+GDH+Y M+Y   I  H  +E D  I    +P++E
Sbjct:    3 NTVAMILAGGQGTRLGVLTERIAKPAVPFGGKYRLIDFTLSNCVNSGIYRVGVLTQYRPHVLSKHIGIGRPWDLD--RKDGGVEILPPYVGRHESDWYKGTANAVYQNLEFLEENDAELVLILSGDHVYAMNYNDLIDYHLLKEADGTIACMEVPIEE 158          

HSP 2 Score: 21.557 bits (44), Expect = 1.462e-26
Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLE 890
            FG+M  D +GR+++F E
Sbjct:  162 FGIMITDVDGRIVDFEE 178          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THENN (Glucose-1-phosphate adenylyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=glgC PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.462e-26
Identity = 65/158 (41.14%), Postives = 97/158 (61.39%), Query Frame = 1
Query:  358 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            +V+ +IL GG GTRL  LT++ AKPAVP G  YRLID  +SNC+NS I ++ VLTQ+    L +H+      ++   + +G VE+L       + +W++GTA+AV Q L   EE++   +LVL+GDH+Y M+Y   I  H    AD T+  +  P++E
Sbjct:    3 NVVAMILAGGQGTRLGVLTERIAKPAVPFGGKYRLIDFTLSNCVNSGIYRVGVLTQYRPHVLAKHIGIGRPWDLD--RKDGGVEILPPYVGRNESDWYKGTANAVYQNLEFLEENDAELVLVLSGDHVYAMNYNDLIDYHLLKGADGTIACMEVPLEE 158          

HSP 2 Score: 22.7126 bits (47), Expect = 1.462e-26
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLE 890
            FG+M  D EGR+++F E
Sbjct:  162 FGIMITDVEGRIVDFEE 178          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CORGB (Glucose-1-phosphate adenylyltransferase OS=Corynebacterium glutamicum (strain R) GN=glgC PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.463e-26
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 1
Query:  358 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +VL I+L GG G RL+PLT+ RAKPAVP G  YRLID  +SN +NS   KI VLTQ+ S SL+RH+S ++  N+ G   +    V A Q+  +   WF G+ADA+ Q L L  +     ++V   DH+YRMD  + +  H  +   ++V  +
Sbjct:   10 NVLAIVLAGGEGKRLFPLTEDRAKPAVPFGGTYRLIDFVLSNLVNSGFLKIAVLTQYKSHSLDRHISLSW--NVSGPTGQYIASVPAQQRLGK--RWFTGSADAILQSLNLISDEKPDYVIVFGADHVYRMDPSQMLDEHIASGRAVSVAGI 157          

HSP 2 Score: 24.6386 bits (52), Expect = 1.463e-26
Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            TAFG ++ D++G +  FLE
Sbjct:  165 TAFGCIQSDDDGNITEFLE 183          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_STRU0 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.718e-26
Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            +L +IL GG GTRL  LT+  AKPAV  G  YR+ID  +SNC NS I  + V+TQ+    LN H+    +  + G  N G V +L    + E   WF+GT+ A+ Q +   +  N   +L+L+GDH+Y+MDYE  +Q H++  A +TV  L +  K
Sbjct:    5 MLALILAGGQGTRLGKLTQNIAKPAVQFGGRYRIIDFALSNCANSGIDNVGVITQYQPLVLNSHIGNGSSWGLEGI-NRG-VTILQPFSATEGNKWFEGTSHAIYQNIDYIDSINPEYVLILSGDHIYKMDYEEMLQVHKDNMASLTVAVLDVPLK 158          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ARTCA (Glucose-1-phosphate adenylyltransferase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=glgC PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.718e-26
Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            ++ VL I+L GG G RL PLT  RAKPAVP   +YRLID  +SN +NS   +I VLTQ+ S SL+RH+S A+  ++ +G Y     V  + AQQ     +WF G+A+A+ Q L L  + N   ++V+  DH+YRMD+ + ++ H  + A  TV A+
Sbjct:    4 NKKVLAIVLAGGEGNRLMPLTADRAKPAVPFAGSYRLIDFAISNLVNSRYLQIVVLTQYKSHSLDRHISEAWRMSTQLGNY-----VASVPAQQR-VGKSWFLGSANAIYQSLNLIHDANPDIVVVVGADHVYRMDFAQMVEQHVHSGAKATVAAV 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_STRS7 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=glgC PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.244e-26
Identity = 63/159 (39.62%), Postives = 92/159 (57.86%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDEKG 831
            +L +IL GG GTRL  LT+  AKPAV  G  YR+ID  +SNC NS I  + V+TQ+   +LN H+    +  + G  N G   +L    + E   WFQGT+ A+ Q +   +  N   +L+L+GDH+Y+MDY+  +Q H+   A +TV  +  P+ E G
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVITQYQPLALNNHIGNGSSWGLDGI-NSG-ATILQPYSATEGNRWFQGTSHAIYQNIDYIDSINPEYVLILSGDHIYKMDYDDMLQTHKANMASLTVAVIDVPLKEAG 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_FUSNN (Glucose-1-phosphate adenylyltransferase OS=Fusobacterium nucleatum subsp. nucleatum GN=glgC PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.244e-26
Identity = 59/151 (39.07%), Postives = 95/151 (62.91%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQ-QSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITV 804
            + ++ +IL GG GTRL  LT+  AKPAV  G  YR+ID  ++NC NS I  + VLTQ+    LN H+ R    ++   + +G V VL    +  ++  W++GTA+A+ Q +   EE++   +L+L+GDH+Y+M+Y++ +Q H + DAD T+
Sbjct:    6 KRIIAMILAGGQGTRLKELTEDLAKPAVAFGGKYRIIDFTLTNCSNSGIDTVGVLTQYEPRILNNHIGRGSPWDLD--RMDGGVTVLQPHTRKNDEKGWYKGTANAIYQNIKFIEEYDPEYVLILSGDHIYKMNYDKMLQFHIQKDADATI 154          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ACIC1 (Glucose-1-phosphate adenylyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glgC PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.244e-26
Identity = 70/158 (44.30%), Postives = 94/158 (59.49%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            VLGI+L GG G RL PLT  RAKPAVP G  YRLID  +SN  N+   KI VLTQ+ + SL+RH++  +  ++ +G Y     V  + AQQ    P WF G+ADA+ Q L L  +     ILV   DH+YRMD  + ++ H  + A +TV A+ +  K
Sbjct:    7 VLGIVLAGGQGRRLLPLTADRAKPAVPFGGIYRLIDFVLSNLANAGFLKIVVLTQYKNHSLDRHITTTWRMSTLLGNY-----VTPVPAQQR-VGPRWFSGSADAIFQSLNLVYDEQPDYILVFGADHIYRMDPRQMLEEHIASGASVTVAAVRVPRK 158          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THEP1 (Glucose-1-phosphate adenylyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgC PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.931e-26
Identity = 62/158 (39.24%), Postives = 97/158 (61.39%), Query Frame = 1
Query:  358 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + + +IL GG GTRL  LT++ AKPA+P G  YRLID  +SNC+NS I ++ VLTQ+    L++H+      ++   + +G VE+L       + +W++GTA+AV Q L   EE++   +L+L+GDH+Y M+Y   I  H  +E D  I    +P++E
Sbjct:    3 NTVAMILAGGQGTRLGVLTERVAKPAIPFGGKYRLIDFTLSNCVNSGIYRVGVLTQYRPHVLSKHIGIGRPWDLD--RKDGGVEILPPYVGRHESDWYKGTANAVYQNLEFLEENDAELVLILSGDHVYAMNYNDLIDYHLLKEADGTIACMEVPIEE 158          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_STRMU (Glucose-1-phosphate adenylyltransferase OS=Streptococcus mutans GN=glgC PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.931e-26
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            +L +IL GG GTRL  LT+  AKPAV  G  YR+ID  +SNC NS I+ + ++TQ+   +LN H+    +  + G  N G   +L    + E   WFQGT+ A+ Q +   +  N   +L+L+GDH+Y+MDY+  +Q H++  A +TV  + +  K
Sbjct:    5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGINNVGIITQYQPLALNSHIGNGSSWGLDGI-NSG-ATILQPYSATEGNRWFQGTSHAIYQNIDYIDSINPEYVLILSGDHIYKMDYDDMLQTHKDNMASLTVAVIDVPLK 158          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_THEMA1.462e-2639.87Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_THENN1.462e-2641.14Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_CORGB1.463e-2642.11Glucose-1-phosphate adenylyltransferase OS=Coryneb... [more]
GLGC_STRU01.718e-2640.38Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_ARTCA1.718e-2642.95Glucose-1-phosphate adenylyltransferase OS=Arthrob... [more]
GLGC_STRS72.244e-2639.62Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_FUSNN2.244e-2639.07Glucose-1-phosphate adenylyltransferase OS=Fusobac... [more]
GLGC_ACIC12.244e-2644.30Glucose-1-phosphate adenylyltransferase OS=Acidoth... [more]
GLGC_THEP12.931e-2639.24Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]
GLGC_STRMU2.931e-2638.46Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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