EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THEAB (Glucose-1-phosphate adenylyltransferase OS=Thermosipho africanus (strain TCF52B) GN=glgC PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.455e-25
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            ++V+ +IL GG GTRL  LT+K AKPAV  G  YRLID  +SNC+NS I KI VLTQ+    LN+H+      ++   + +G V +L    + +   W+ GTADAV + +   +++N   +++L+GDH+Y MDY   +  H+   A  TV  +  P+ E
Sbjct:    2 KNVVALILAGGQGTRLGVLTEKIAKPAVQFGGKYRLIDFTLSNCVNSGIYKIGVLTQYKPHLLNQHIGIGKPWDLD--RKDGGVTILQPYYTEKKGVWYNGTADAVYRNIEFVDDYNPEYVVILSGDHIYSMDYNELLDYHKAKSALATVACMEVPLSE 158          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACCL (Glucose-1-phosphate adenylyltransferase (Fragment) OS=Bacillus caldolyticus GN=glgC PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.455e-25
Identity = 60/159 (37.74%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            +  + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + VLTQ+    L+ ++    A ++   +  G V VL    +     W++GTA+A+ Q +   E+++   +LVL+GDH+Y+MDY++ +  H  ++ DA I+V  +P +E
Sbjct:    3 KKCIAMLLAGGQGSRLRSLTKNIAKPAVPFGGKYRIIDFTLSNCTNSGIDTVGVLTQYQPLLLHSYIGIGSAWDLD--RRNGGVTVLPPYSASSGVKWYEGTANAIYQNMNYIEQYDPDYVLVLSGDHIYKMDYQQMLDYHIAKQADATISVIEVPWEE 159          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_KOCRD (Glucose-1-phosphate adenylyltransferase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=glgC PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.900e-25
Identity = 67/160 (41.88%), Postives = 98/160 (61.25%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMD 822
            + VL I+L GG G RL PLT+ RAKPAVP    YRLID  +SN +NS   +I VLTQ+ S SL+RHLS  +  ++ +G Y     V  + AQQ     +WF G+A+A+ Q + L ++ +   ++V+  DH+YRMD+   ++ H E+ A  TV  +  PM+
Sbjct:    5 KKVLAIVLAGGEGKRLMPLTEDRAKPAVPFAGGYRLIDFALSNLVNSGYLQIVVLTQYKSHSLDRHLSETWRLSTQLGNY-----VTSVPAQQR-RGKDWFLGSANAIYQSMNLIDDADPDIVVVVGADHVYRMDFADMVEKHIESGAKATVAGVRQPME 158          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CLOD6 (Glucose-1-phosphate adenylyltransferase OS=Clostridium difficile (strain 630) GN=glgC PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.900e-25
Identity = 63/159 (39.62%), Postives = 94/159 (59.12%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRE--TDADITVXALPMDE 825
            + +L +IL GG G+RL   TK+ AKPAV  G  YR+ID  +SNC NS I  + VLTQ+    LN H+     S+    +  G V VL    + ++ NW+ GTA A+ Q +   + +N   +L+L+GDH+Y+MDY + ++ H+E  + A I V  +P DE
Sbjct:    3 KEMLAMILAGGQGSRLGVFTKRIAKPAVSFGGKYRIIDFVLSNCSNSGIDTVGVLTQYRPLILNSHI--GMGSHWDLDRINGGVYVLQPFMNEKEGNWYNGTAHAIYQNMDFVDTYNPEYVLILSGDHIYKMDYSKMLKFHKEKGSKATIAVIEVPWDE 159          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_STRAW (Glucose-1-phosphate adenylyltransferase OS=Streptomyces avermitilis GN=glgC PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.481e-25
Identity = 67/154 (43.51%), Postives = 93/154 (60.39%), Query Frame = 1
Query:  358 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            SVLGI+L GG G RL PLT  RAKPAV  G  YRL+D  +SN +N++I +I VLTQ+ S SL+RH++  +  +S +G Y     +  + AQQ    P W+ G+ADA+ Q L L  +     I V   DH+YRMD  + +  H E+ A +TV  +
Sbjct:    7 SVLGIVLAGGEGKRLMPLTADRAKPAVTFGGTYRLVDFVLSNLVNADILRICVLTQYKSHSLDRHITTTWRMSSLLGNY-----ITPVPAQQR-LGPRWYLGSADAILQSLNLVYDERPEYIAVFGADHVYRMDPRQMLGEHIESGAGVTVAGI 154          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ARTAT (Glucose-1-phosphate adenylyltransferase OS=Arthrobacter aurescens (strain TC1) GN=glgC PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.241e-25
Identity = 67/157 (42.68%), Postives = 94/157 (59.87%), Query Frame = 1
Query:  349 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            A + VL I+L GG G RL PLT  RAKPAVP    YRLID  +SN +NS   KI VLTQ+ S SL+RH+S  +  ++ +G Y     V  + AQQ     +WF G+A+A+ Q L L  +     ++V+  DH+YRMD+ + ++ H  + A  TV A+
Sbjct:    4 ALKKVLAIVLAGGEGNRLMPLTADRAKPAVPFAGGYRLIDFALSNLVNSGYLKIVVLTQYKSHSLDRHISETWRMSTQLGRY-----VASVPAQQR-VGKSWFLGSANAIYQSLNLIHDDAPDIVVVVGADHVYRMDFSQMVEQHIASGAKATVAAV 154          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_STRCO (Glucose-1-phosphate adenylyltransferase OS=Streptomyces coelicolor GN=glgC PE=3 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 4.233e-25
Identity = 66/153 (43.14%), Postives = 91/153 (59.48%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +LGI+L GG G RL PLT  RAKPAV  G  YRL+D  +SN +N +I +I VLTQ+ S SL+RH++  +  +S +G Y     V  + AQQ    P WF G+ADA+ Q L L  +     + V   DH+YRMD  + +  H E+ A +TV  +
Sbjct:    1 MLGIVLAGGEGKRLMPLTADRAKPAVTFGGTYRLVDFVLSNLVNGDILRICVLTQYKSHSLDRHITTTWRMSSLLGNY-----VTPVPAQQR-LGPRWFLGSADAILQSLNLVHDEQPEYVAVFGADHVYRMDPRQMLAQHIESGAGVTVAGI 147          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_CLOTH (Glucose-1-phosphate adenylyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=glgC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.233e-25
Identity = 56/153 (36.60%), Postives = 94/153 (61.44%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            + ++ ++L GG G+RL  LTK  AKPAV  G  YR+ID  +SNC+NS+I  + VLTQ+    LN H+      +M   +  G V +L+     E   W++GTA+AV Q +   ++++   +++L+GDH+Y+M+Y + +  H+E +AD T+  +
Sbjct:    4 KEIIALLLAGGQGSRLGVLTKNIAKPAVLYGGKYRIIDFSLSNCVNSDIDTVGVLTQYQPLELNAHIGIGKPWDMD--RINGGVTILSPYLKAEIGEWYKGTANAVFQNIHYVDKYSPKYVIILSGDHVYKMNYSQMLDFHKENNADATISVI 154          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACLD (Glucose-1-phosphate adenylyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=glgC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.233e-25
Identity = 56/150 (37.33%), Postives = 88/150 (58.67%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + VLTQ+    LN ++      ++   +N+G V +L+      +  W++GTA A+ +     +E     +L+L+GDH+Y+MDY + ++ H E  AD T+  +
Sbjct:    6 VAMLLAGGKGSRLNALTKNLAKPAVPFGGKYRIIDFALSNCANSGIHHVGVLTQYQPLLLNSYIGIGEPWDLD--RNDGGVSILSPYAEASEVKWYKGTASAIYENRHFLKELQPEHVLILSGDHIYKMDYGKMLEYHAEKQADATIAVI 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACCN (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=glgC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.233e-25
Identity = 59/159 (37.11%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            ++ + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL          W+ GTA A+ Q +    ++N   +L+L+GDH+Y+MDY + +  H  +E D  I+V  +P DE
Sbjct:    5 QNCVAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCSNSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVNGGVTVLPPYAEASGVKWYTGTASAIYQNMNFLRQYNPEYVLILSGDHIYKMDYSKMLDYHIAKEADVSISVIEVPWDE 161          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_THEAB1.455e-2539.62Glucose-1-phosphate adenylyltransferase OS=Thermos... [more]
GLGC_BACCL1.455e-2537.74Glucose-1-phosphate adenylyltransferase (Fragment)... [more]
GLGC_KOCRD1.900e-2541.88Glucose-1-phosphate adenylyltransferase OS=Kocuria... [more]
GLGC_CLOD61.900e-2539.62Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_STRAW2.481e-2543.51Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_ARTAT3.241e-2542.68Glucose-1-phosphate adenylyltransferase OS=Arthrob... [more]
GLGC_STRCO4.233e-2543.14Glucose-1-phosphate adenylyltransferase OS=Strepto... [more]
GLGC_CLOTH4.233e-2536.60Glucose-1-phosphate adenylyltransferase OS=Clostri... [more]
GLGC_BACLD4.233e-2537.33Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACCN4.233e-2537.11Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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