EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ARTS2 (Glucose-1-phosphate adenylyltransferase OS=Arthrobacter sp. (strain FB24) GN=glgC PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.233e-25
Identity = 64/156 (41.03%), Postives = 95/156 (60.90%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            ++ VL I+L GG G RL PLT  RAKP VP   +YRLID  +SN +NS   +I VLTQ+ S SL+RH+S  +  ++ +G Y     +  + AQQ     +WF G+A+A+ Q L L  + N   ++V+  DH+YRMD+ + ++ H  + A  TV A+
Sbjct:    4 NKKVLAIVLAGGEGNRLMPLTADRAKPGVPFAGSYRLIDFALSNLVNSRYLQIVVLTQYKSHSLDRHISETWRMSTQLGNY-----IASVPAQQR-VGKSWFLGSANAIYQSLNLIHDANPDIVVVVGADHVYRMDFAQMVEQHVASGAKATVAAV 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_GEOTN (Glucose-1-phosphate adenylyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgC PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.232e-24
Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  + ++L GG G+RL  LT   AKPAVP G  YR+ID  +SNC NS I  + VLTQ+    L+ ++    A ++   +  G V VL          W++GTA+AV Q +   E++N   +LVL+GDH+Y+MDY+  +  H    AD+T+  +
Sbjct:    3 KKCIAMLLAGGQGSRLRSLTTNIAKPAVPFGGKYRIIDFTLSNCTNSGIDTVGVLTQYQPLLLHSYIGIGSAWDLD--RRNGGVTVLPPYSVSSGVKWYEGTANAVYQNINYIEQYNPDYVLVLSGDHIYKMDYQHMLDYHIAKQADVTISVI 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACST (Glucose-1-phosphate adenylyltransferase OS=Bacillus stearothermophilus GN=glgC PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.232e-24
Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  + ++L GG G+RL  LT   AKPAVP G  YR+ID  +SNC NS I  + VLTQ+    L+ ++    A ++   +  G V VL          W++GTA+AV Q +   E++N   +LVL+GDH+Y+MDY+  +  H    AD+T+  +
Sbjct:    3 KKCIAMLLAGGQGSRLRSLTTNIAKPAVPFGGKYRIIDFTLSNCTNSGIDTVGVLTQYQPLLLHSYIGIGSAWDLD--RRNGGVTVLPPYSVSSGVKWYEGTANAVYQNINYIEQYNPDYVLVLSGDHIYKMDYQHMLDYHIAKQADVTISVI 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACCR (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=glgC PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.232e-24
Identity = 59/156 (37.82%), Postives = 89/156 (57.05%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL          W+ GTA A+ Q L    ++    +L+L+GDH+Y+MDY + +  H  +E+D  I+V  +P DE
Sbjct:    8 VAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKESDVSISVIEVPWDE 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_DESRM (Glucose-1-phosphate adenylyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=glgC PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.608e-24
Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  + ++L GG G+RL  LTKK AKPAVP G  YR+ID  +SNC NS    + VLTQ+   +LN ++     S+    +  G V VL          W++GTA+A+ Q +   +++    IL+L+GDH+Y+MDY   +  H+E  AD T+  +
Sbjct:    4 KECVAMLLAGGQGSRLGVLTKKLAKPAVPFGGRYRIIDFTLSNCNNSGFDTVGVLTQYQPLALNTYI--GIGSHWDLDRKNGGVTVLPPFVKEMGGEWYKGTANAIYQNIEFVDQYKPKYILILSGDHIYKMDYSLMLDFHKEKQADATIAVI 154          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACWK (Glucose-1-phosphate adenylyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=glgC PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.608e-24
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL          W+ GTA A+ Q L    ++    +L+L+GDH+Y+MDY + +  H  +E D  I+V  +P DE
Sbjct:    8 VAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVNGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDE 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACHK (Glucose-1-phosphate adenylyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=glgC PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.608e-24
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL          W+ GTA A+ Q L    ++    +L+L+GDH+Y+MDY + +  H  +E D  I+V  +P DE
Sbjct:    8 VAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDE 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACCZ (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=glgC PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.608e-24
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL          W+ GTA A+ Q L    ++    +L+L+GDH+Y+MDY + +  H  +E D  I+V  +P DE
Sbjct:    8 VAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDE 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACCQ (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain Q1) GN=glgC PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.608e-24
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL          W+ GTA A+ Q L    ++    +L+L+GDH+Y+MDY + +  H  +E D  I+V  +P DE
Sbjct:    8 VAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDE 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACC1 (Glucose-1-phosphate adenylyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=glgC PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.608e-24
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL          W+ GTA A+ Q L    ++    +L+L+GDH+Y+MDY + +  H  +E D  I+V  +P DE
Sbjct:    8 VAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDE 161          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_ARTS24.233e-2541.03Glucose-1-phosphate adenylyltransferase OS=Arthrob... [more]
GLGC_GEOTN1.232e-2437.91Glucose-1-phosphate adenylyltransferase OS=Geobaci... [more]
GLGC_BACST1.232e-2437.91Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACCR1.232e-2437.82Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_DESRM1.608e-2437.91Glucose-1-phosphate adenylyltransferase OS=Desulfo... [more]
GLGC_BACWK1.608e-2437.82Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACHK1.608e-2437.82Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACCZ1.608e-2437.82Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACCQ1.608e-2437.82Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACC11.608e-2437.82Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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