EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3535 contig Csv1_Contig3535:1..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGL1_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.669e-45
Identity = 91/162 (56.17%), Postives = 118/162 (72.84%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-EDPNWFQGTADAVRQYLWLFEEH----NVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDE 825
            V  +ILGGG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVLAA Q P E   WF+GTADAVR+++W+ E++    ++  IL+L+GD LYRMDY   +Q H + +ADIT+   P+ E
Sbjct:   91 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAVRKFIWVLEDYYKHKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGE 249          

HSP 2 Score: 28.4906 bits (62), Expect = 1.669e-45
Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  807 CPAHG*KRPTAFGLMKIDEEGRLLNFLENQK 899
            C   G  R + +GL+K D  GR++ F E  K
Sbjct:  244 CAPVGESRASEYGLVKFDSSGRVIQFSEKPK 274          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGL2_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.669e-45
Identity = 92/162 (56.79%), Postives = 117/162 (72.22%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-EDPNWFQGTADAVRQYLWLFEEH----NVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDE 825
            V  +ILGGG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVLAA Q P E   WFQGTADAVR+++W+ E++     +  IL+L+GD LYRMDY   +Q H + +ADIT+   P+ E
Sbjct:   87 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFQGTADAVRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGE 245          

HSP 2 Score: 28.1054 bits (61), Expect = 1.669e-45
Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  807 CPAHG*KRPTAFGLMKIDEEGRLLNFLENQK 899
            C   G  R + +GL+K D  GR++ F E  K
Sbjct:  240 CAPVGESRASDYGLVKFDSSGRVIQFSEKPK 270          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGL1_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Zea mays GN=SH2 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.669e-45
Identity = 97/208 (46.63%), Postives = 136/208 (65.38%), Query Frame = 1
Query:  232 DKIFSKAVTGDRRRERRPIVVSPQAVSDSKNSQTCLD----PEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK-NEGFVEVLAAQQSPEDP-NWFQGTADAVRQYLWLFEEH----NVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDE 825
            +K       G R       +++  A  ++ +SQT        +A+R V  IILGGG G++L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V++QFNS SLNRH+ R Y    GG    +G V+VLAA Q PE+P  WFQGTAD++R+++W+ E++    ++  I++L+GD LYRM+Y   +Q H E DADIT+   P+DE
Sbjct:   38 EKALRNRCFGGRVAATTQCILTSDACPETLHSQTQSSRKNYADANR-VSAIILGGGTGSQLFPLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMSQFNSTSLNRHIHRTYLE--GGINFADGSVQVLAATQMPEEPAGWFQGTADSIRKFIWVLEDYYSHKSIDNIVILSGDQLYRMNYMELVQKHVEDDADITISCAPVDE 242          

HSP 2 Score: 26.5646 bits (57), Expect = 1.669e-45
Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 3
Query:  828 RPTAFGLMKIDEEGRLLNFLENQK 899
            R +  GL+KID  GR+L F E  K
Sbjct:  244 RASKNGLVKIDHTGRVLQFFEKPK 267          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGL2_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-L PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 2.175e-45
Identity = 91/162 (56.17%), Postives = 118/162 (72.84%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-EDPNWFQGTADAVRQYLWLFEEH----NVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDE 825
            V  +ILGGG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVLAA Q P E   WF+GTADAVR+++W+ E++    ++  IL+L+GD LYRMDY   +Q H + +ADIT+   P+ E
Sbjct:   90 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAVRKFIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGE 248          

HSP 2 Score: 28.1054 bits (61), Expect = 2.175e-45
Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  807 CPAHG*KRPTAFGLMKIDEEGRLLNFLENQK 899
            C   G  R + +GL+K D  GR++ F E  K
Sbjct:  243 CAPVGESRASEYGLVKFDSSGRVVQFSEKPK 273          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGL3_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (Fragment) OS=Triticum aestivum GN=AGA.7 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 4.007e-44
Identity = 90/162 (55.56%), Postives = 116/162 (71.60%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-EDPNWFQGTADAVRQYLWLFEEH----NVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDE 825
            V  +ILGGG GT+L+PLT  RA PAVP+G  YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y   +GG  N  +G VEVLAA Q P E   WF+GTADA R+ +W+ E++    ++  IL+L+GD LYRMDY   +Q H + +ADIT+   P+ E
Sbjct:   71 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAWRKIIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGE 229          

HSP 2 Score: 28.1054 bits (61), Expect = 4.007e-44
Identity = 12/31 (38.71%), Postives = 17/31 (54.84%), Query Frame = 3
Query:  807 CPAHG*KRPTAFGLMKIDEEGRLLNFLENQK 899
            C   G  R + +GL+K D  GR++ F E  K
Sbjct:  224 CAPVGESRASEYGLVKFDSSGRVVQFSEQPK 254          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THIDA (Glucose-1-phosphate adenylyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgC PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.528e-36
Identity = 79/165 (47.88%), Postives = 107/165 (64.85%), Query Frame = 1
Query:  325 SQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            ++  L  E +R  L ++L GG G+RL  LT  RAKPAVP+G  YR+ID P+SNC+NS I +I VLTQ+ S SL RHL RA+    G  + E   FVE+L AQQ      W+QGTADA+ Q L + + H+   +LVL GDH+Y MDY + +  H +T AD+TV ++
Sbjct:   16 TEPTLVTELTRKTLALVLAGGEGSRLKDLTAWRAKPAVPIGGKYRIIDFPLSNCVNSGIRRIGVLTQYKSHSLIRHLQRAW----GLMRTEVGEFVEILPAQQRTHKKEWYQGTADALFQNLDIMQRHHPEYVLVLGGDHVYTMDYTQMLLYHVQTGADVTVGSV 176          

HSP 2 Score: 24.6386 bits (52), Expect = 7.528e-36
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLENQKE 902
            AFG+M +DE  R+  F E  +E
Sbjct:  185 AFGVMSVDESLRITEFNEKPRE 206          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_NITEU (Glucose-1-phosphate adenylyltransferase OS=Nitrosomonas europaea GN=glgC PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.313e-34
Identity = 73/154 (47.40%), Postives = 102/154 (66.23%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R+ L +IL GG GTRL  LT  RAKPAVP G  +R+ID  +SNC+NS + +I V+TQ+ + SL RH+ R ++   G ++   F+E+L AQQ  E+  W+QGTADAV Q L +   HN   +L+L GDH+Y+MDY R +  H E  AD+T+  L
Sbjct:   20 TRNTLALILAGGRGTRLKNLTDWRAKPAVPFGGKFRIIDFTLSNCVNSGVRRIGVVTQYKAQSLIRHIQRGWSFLDGRFQE--FIELLPAQQRTEEGTWYQGTADAVFQNLDILRTHNPGYVLILGGDHIYKMDYGRILAEHVERQADLTIACL 171          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_NITOC (Glucose-1-phosphate adenylyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgC PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.048e-34
Identity = 77/166 (46.39%), Postives = 106/166 (63.86%), Query Frame = 1
Query:  316 SKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +KN         +R  L +IL GG G+RL  LT  RAKPAVP+G  +R+ID P+SNC+NS + +I VLTQ+ + SL RH+ + +   M GY  E FVE++ A Q  ED +W+ GTADAV Q L +   HN   +L+LAGDH+Y+MDY   +  H E +AD+TV  +
Sbjct:    2 TKNYSARFVSRLTRDTLALILAGGRGSRLKNLTAWRAKPAVPIGGKFRIIDFPLSNCVNSGVRRICVLTQYKAHSLVRHIQQGWGF-MRGYLGE-FVELMPASQRIED-SWYAGTADAVYQNLDIVRSHNPEYVLILAGDHVYKMDYGDMLAYHVEREADMTVGCI 164          

HSP 2 Score: 24.2534 bits (51), Expect = 3.048e-34
Identity = 10/22 (45.45%), Postives = 13/22 (59.09%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K   AFG+M +DE  R+  F E
Sbjct:  169 KEAKAFGVMSVDENFRVTEFTE 190          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ACIBL (Glucose-1-phosphate adenylyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glgC PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.988e-34
Identity = 66/153 (43.14%), Postives = 105/153 (68.63%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMD 822
            LG++L GGAG RLYPLT+ RAKPAV  G  YR+IDI +SNC+NS + ++Y+LTQ+ + SLNRH+   ++  +G    E F+E+L   +   + NW+ GTADAV Q ++         +L+L+GDH+Y+M+Y+  ++ H+++ AD+T+  + +D
Sbjct:    5 LGVLLAGGAGERLYPLTRDRAKPAVNFGGIYRIIDITLSNCINSGLRRVYILTQYKALSLNRHIREGWSGIVGNELGE-FIEILPPMKRVSE-NWYMGTADAVYQNIYSIGSEQPRYVLILSGDHIYKMNYDLMMRQHKDSGADVTLATILID 155          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BURXL (Glucose-1-phosphate adenylyltransferase OS=Burkholderia xenovorans (strain LB400) GN=glgC PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 5.170e-34
Identity = 74/156 (47.44%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  346 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  R+ L I+L GG GTRL PLT KR KPAV  G  YR+ID  +SNCLNS I +I V+TQ+ + SL RHL R ++   G +    F+++  AQQ  E  +W++GTADAV Q L +        ++VLAGDH+Y+MDY R I  H E+ AD TV  +
Sbjct:    9 DLQRTTLAIVLAGGRGTRLGPLTNKRVKPAVHFGGKYRIIDFALSNCLNSGIRRIAVVTQYKAHSLLRHLQRGWSFLRGEFGE--FIDLWPAQQRVEGAHWYRGTADAVFQNLDIIRSIRPKYVVVLAGDHIYKMDYTRMIADHAESGADCTVGCI 162          

HSP 2 Score: 23.8682 bits (50), Expect = 5.170e-34
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLE 890
            AFG+M +DE  R+  F+E
Sbjct:  171 AFGVMHVDENRRVTGFVE 188          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGL1_HORVU1.669e-4556.17Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_MAIZE1.669e-4556.79Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL1_MAIZE1.669e-4546.63Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL2_WHEAT2.175e-4556.17Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGL3_WHEAT4.007e-4455.56Glucose-1-phosphate adenylyltransferase large subu... [more]
GLGC_THIDA7.528e-3647.88Glucose-1-phosphate adenylyltransferase OS=Thiobac... [more]
GLGC_NITEU1.313e-3447.40Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC_NITOC3.048e-3446.39Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC_ACIBL4.988e-3443.14Glucose-1-phosphate adenylyltransferase OS=Acidoba... [more]
GLGC_BURXL5.170e-3447.44Glucose-1-phosphate adenylyltransferase OS=Burkhol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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