EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3535 contig Csv1_Contig3535:1..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACAN (Glucose-1-phosphate adenylyltransferase OS=Bacillus anthracis GN=glgC PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.608e-24
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL          W+ GTA A+ Q L    ++    +L+L+GDH+Y+MDY + +  H  +E D  I+V  +P DE
Sbjct:    8 VAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPEYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDE 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACAH (Glucose-1-phosphate adenylyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=glgC PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.101e-24
Identity = 59/156 (37.82%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  364 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAH--RETDADITVXALPMDE 825
            + ++L GG G+RL  LTK  AKPAVP G  YR+ID  +SNC NS I  + +LTQ+    L+ ++    A ++   +  G V VL          W+ GTA A+ Q L    ++    +L+L+GDH+Y+MDY + +  H  +E D  I+V  +P DE
Sbjct:    8 VAMLLAGGKGSRLSALTKNLAKPAVPFGGKYRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLD--RVSGGVTVLPPYAESSGVKWYTGTASAIYQNLNYLSQYEPDYVLILSGDHIYKMDYSKMLDYHIEKEADVSISVIEVPWDE 161          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THEM4 (Glucose-1-phosphate adenylyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgC PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.583e-24
Identity = 63/159 (39.62%), Postives = 93/159 (58.49%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            ++V+ +IL GG GTRL  LT+K AKPAV  G  YRLID  +SNC+NS I KI VLTQ+    LNRH+      ++   + +G V +L    + +   W++GTADAV   +   + ++   +++L+GDH+Y MDY   +  H    A  TV  +  P+ E
Sbjct:    2 KNVVALILAGGQGTRLGVLTEKIAKPAVQFGGKYRLIDFTMSNCVNSGIYKIGVLTQYKPHLLNRHIGIGKPWDLD--RKDGGVTILQPYSTEKVGVWYKGTADAVYSNIEFVDSYSPDYVVILSGDHIYSMDYNELVDYHVAKSALGTVACMEVPLSE 158          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BACSU (Glucose-1-phosphate adenylyltransferase OS=Bacillus subtilis GN=glgC PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.583e-24
Identity = 55/153 (35.95%), Postives = 88/153 (57.52%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  + ++L GG G+RL  LTK  AKPAV  G  YR+ID  +SNC NS I  + +LTQ+    LN ++    A ++  Y   G V VL       +  W++GTA ++ + L    +++   +L+L+GDH+Y+MDY + +  H E  AD+T+  +
Sbjct:    3 KQCVAMLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQPLELNSYIGIGSAWDLDRY--NGGVTVLPPYAESSEVKWYKGTASSIYENLNYLNQYDPEYVLILSGDHIYKMDYGKMLDYHIEKKADVTISVI 153          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_DESHD (Glucose-1-phosphate adenylyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glgC PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.966e-22
Identity = 53/153 (34.64%), Postives = 89/153 (58.17%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  + ++L GG G+RL  LT+   KPAV     YR+ID  +SNC NSNI  + VLTQ+   +LN +++   A ++      G + +L         +W++GTA+A+ Q +     +N   IL+L+GDH+Y+MDY   +  H++  A++T+ A+
Sbjct:    4 KECIAMLLAGGQGSRLGCLTRNIPKPAVSFAGKYRIIDFSLSNCSNSNIDTVGVLTQYKPFALNTYINMGSAWDLNCL--NGGIHILPPFVGEAQGSWYKGTANAIYQNMDFINFYNPEYILILSGDHIYQMDYYEMLSCHKQKHAEVTLSAI 154          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_DESHY (Glucose-1-phosphate adenylyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=glgC PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.354e-22
Identity = 53/153 (34.64%), Postives = 89/153 (58.17%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  + ++L GG G+RL  LT+   KPAV     YR+ID  +SNC NSNI  + VLTQ+   +LN +++   A ++      G + +L         +W++GTA+A+ Q +     +N   IL+L+GDH+Y+MDY   +  H++  A++T+ A+
Sbjct:    4 KECIAMLLAGGQGSRLGCLTRNIPKPAVSFAGKYRIIDFSLSNCSNSNIDTVGVLTQYKPFALNTYINMGSAWDLNCL--NGGIHILPPFVGEAQGSWYKGTANAIYQNMDFINFYNPEYILILSGDHIYQMDYYEMLSYHKQKHAEVTLSAI 154          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THELT (Glucose-1-phosphate adenylyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgC PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.758e-22
Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            R VL +IL GG G RL  LT+K AKPAVP G  YRLID  +SNC+NS I  + VLTQ+    LN H++     ++   + +G V +L          W++GTA+AV Q +   +  +   +L+L+GDH+Y MDY   I  H    A+ T+  +
Sbjct:    2 RKVLALILAGGHGKRLGVLTEKIAKPAVPFGGKYRLIDFTLSNCVNSGIYHVGVLTQYRPHLLNNHINIGRPWDLD--RKKGGVTILPPYLGGV-AGWYRGTANAVYQNIEYVDSADPDFVLILSGDHVYAMDYNDIIDFHILKGAEGTIACI 151          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_BACAN1.608e-2437.82Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_BACAH2.101e-2437.82Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_THEM43.583e-2439.62Glucose-1-phosphate adenylyltransferase OS=Thermos... [more]
GLGC_BACSU3.583e-2435.95Glucose-1-phosphate adenylyltransferase OS=Bacillu... [more]
GLGC_DESHD1.966e-2234.64Glucose-1-phosphate adenylyltransferase OS=Desulfi... [more]
GLGC_DESHY3.354e-2234.64Glucose-1-phosphate adenylyltransferase OS=Desulfi... [more]
GLGC_THELT9.758e-2239.87Glucose-1-phosphate adenylyltransferase OS=Thermot... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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