EY659861

Overview
NameEY659861
Unique NameEY659861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_DECAR (Glycogen synthase OS=Dechloromonas aromatica (strain RCB) GN=glgA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.453e-29
Identity = 80/214 (37.38%), Postives = 112/214 (52.34%), Query Frame = 1
Query:   76 PLD*PYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSW 702
            P   P +   Y A+ +  AK   K ALQ E+GL V  + P+ G I RL  QKG D+L        +   Q++VLG+G K ME    +L   +P +      F+  LAH I AGAD  ++PSRFEPCGL Q++++RYGT PIV +TGGL DTV    E+         F +D +        A+  T+     T+  + L   + +NGM +D SW
Sbjct:  259 PATDPVLATGYAANRLA-AKRTNKAALQTEMGLEVTADRPLFGVISRLTSQKGLDLLLTVAEGLPELPAQLVVLGSGDKLMEAGFVELAKRFPAQIVVKIGFDEGLAHRIEAGADCFVMPSRFEPCGLNQMYSLRYGTPPIVRATGGLADTVVDVCEDTLADKSANGFVLDGDTPH-----ALWLTIEHVCRTWQDKKLWQRIQQNGMRRDFSW 466          

HSP 2 Score: 30.0314 bits (66), Expect = 1.453e-29
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 2
Query:   35 IKGIVNGMDVQEWNPLTDHI 94
            ++GI+NG+D   WNP TD +
Sbjct:  245 LRGILNGVDTDLWNPATDPV 264          
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_GEOUR (Glycogen synthase OS=Geobacter uraniireducens (strain Rf4) GN=glgA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.453e-29
Identity = 77/211 (36.49%), Postives = 117/211 (55.45%), Query Frame = 1
Query:  118 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPS*KWXE 729
            T    K + K+ LQ  +GL    ++PVIG + RL  QKG D+LA  +P F++  +Q+++LGTG +   K L+ +      KARG    ++       LA  I AG+D  L+PS +EPCGL Q+ A+RYG VP+V  TGGL DTV +     Q G+   +  + +     A+  TV R+L  +  + A  ++MK GM+ D SW   + ++ E
Sbjct:  273 TAPAGKAVNKKGLQKLLGLEPAADVPVIGIVSRLTAQKGFDLLAELMPKFVRSRLQLVILGTGDEKYLKLLQDI------KARGAGNISVNIGFHPELAPKIYAGSDIFLMPSHYEPCGLGQMIALRYGAVPLVRKTGGLADTVFDE----QDGATEPNGFSFEDYTPEALWETVSRSLQAFDDKGAWKKLMKRGMSCDYSWDASARRYEE 473          

HSP 2 Score: 26.1794 bits (56), Expect = 1.453e-29
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2
Query:   35 IKGIVNGMDVQEWNPLTD 88
            + G++NG+D   W+P TD
Sbjct:  246 LHGVLNGLDYDLWDPATD 263          
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_STRS7 (Glycogen synthase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=glgA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.453e-29
Identity = 66/167 (39.52%), Postives = 93/167 (55.69%), Query Frame = 1
Query:   88 PYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 570
            P++   + A   +  K   K+ LQ  +GLPV  ++P+IG + RL +QKG  ++   + H ++++VQ+++LGTG    E         YPEK      F++PLA  I    D  L+PS FEPCGL Q+ AMRYG +PIV   GGL DTV      E+  TGF    FS
Sbjct:  260 PHLPASFSAED-LSGKAATKQVLQERLGLPVRADVPLIGMVSRLTDQKGFQLVLEELSHILQQDVQLVLLGTGDPDYEAAFSWFAKAYPEKLSANITFDLPLAQQIYGACDLFLMPSAFEPCGLSQMMAMRYGAIPIVHEIGGLKDTVASYNAYEKTGTGFGFDQFS 425          

HSP 2 Score: 24.6386 bits (52), Expect = 1.453e-29
Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 2
Query:   32 RIKGIVNGMDVQEWNPLTD 88
            ++ GIVNG+D   +NP  D
Sbjct:  241 KLSGIVNGIDTDLFNPARD 259          
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS3 (Glycogen synthase OS=Synechococcus sp. (strain CC9311) GN=glgA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.889e-29
Identity = 74/193 (38.34%), Postives = 104/193 (53.89%), Query Frame = 1
Query:  145 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 702
            K+ LQ  +GL V  +  ++G + RL +QKG D+L       +   + QI+VLGTG + +E  L Q+   +P +      ++  L+ +I AG+D  L+PSRFEPCG+ QL AMRYG VP+V   GGLVDTV      ++  TGF    F       DPVD    +  VR   A     +  E+ + GM QD SW
Sbjct:  257 KQVLQERMGLEVRPDAYLLGMVSRLVDQKGVDLLLQVADRLLAYTDTQIVVLGTGDRGLESGLWQMASRHPGRVSVFLTYDDDLSRLIYAGSDAFLMPSRFEPCGISQLLAMRYGCVPVVRKVGGLVDTVPPHDPAQQSGTGFCFDRF-------DPVDF--FTALVRSWEAFRHQDSWRELQRRGMRQDYSW 440          

HSP 2 Score: 32.3426 bits (72), Expect = 1.889e-29
Identity = 10/19 (52.63%), Postives = 17/19 (89.47%), Query Frame = 2
Query:   32 RIKGIVNGMDVQEWNPLTD 88
            +++GI+NG+D++ WNP TD
Sbjct:  220 KLRGILNGIDLEAWNPATD 238          
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_CHLPD (Glycogen synthase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glgA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.891e-29
Identity = 67/195 (34.36%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  124 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWK 705
            +D K   K+ALQ E GL VD   P++G I   +E +G+D+LA ++   +  ++Q+++ G+G K  EK        YPE+     ++     H+ IAG D +L+P R E CG++QL AM YGT+P+V + GG+++T+ E   G  +GS  +  E  D   V  +S     ALA Y   +   +++   M++D +WK
Sbjct:  285 LDGKADNKKALQEEAGLSVDAERPLVGVIAGFDEFQGADLLARSLEKLVALDMQLVICGSGDKVYEKTFRDFAEQYPEQVSLQIEYTDAFMHLAIAGMDILLMPGRIESCGMMQLFAMSYGTIPVVYAGGGIIETIHELQEG--IGSGFIFHEYTDDSLVGKLS----EALAMYSDEERWPQLVHEAMSKDFAWK 473          

HSP 2 Score: 31.187 bits (69), Expect = 1.891e-29
Identity = 10/20 (50.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:   35 IKGIVNGMDVQEWNPLTDHI 94
            + GI+NG+D ++WNP TD +
Sbjct:  256 LHGILNGIDTRQWNPATDKL 275          
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_SERP5 (Glycogen synthase OS=Serratia proteamaculans (strain 568) GN=glgA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.892e-29
Identity = 73/217 (33.64%), Postives = 116/217 (53.46%), Query Frame = 1
Query:   73 EPLD*PYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWK 705
            +P   P +  +YDA  + + K   K  LQ  +GL VD ++P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        YPE+      ++   +H II GAD I++PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV     E    G   G    DC+AV      A+   +RRA+  +   +    + ++ M+ D  W+
Sbjct:  254 DPSHDPRLTARYDADNLKN-KAKNKLHLQKAMGLKVDESLPLFAVVSRLTSQKGLDLVLEALPALLEQGGQLALLGAGDAVLQQAFLAAAADYPEQVGVQIGYHEAFSHRIIGGADVIMVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVVDCALENLADGSASGFVFDDCDAV------ALGNAIRRAMVLWSRPKHWRHVQRHAMSVDFGWQ 463          

HSP 2 Score: 25.0238 bits (53), Expect = 1.892e-29
Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 2
Query:   32 RIKGIVNGMDVQEWNPLTD 88
            R+ GI+NG+D + W+P  D
Sbjct:  240 RLSGILNGVDDKIWDPSHD 258          
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_PROM4 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=glgA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.462e-29
Identity = 79/216 (36.57%), Postives = 115/216 (53.24%), Query Frame = 1
Query:  145 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPS*KWXETLLNLESAGSEPGIDXEEI 786
            K ALQ+++GL V  N  ++G +GRL +QKG D+L       +   + QI+VLGTG+  +E  L QL   YP +      ++  L+ +I AG D  L+PSRFEPCG+ QL AMRYG++P+V + GGLVDTV       Q G+ F  D    +P+D    +  VR   A    ++   +    M Q  SW   + ++ E +        EP  D EE+
Sbjct:  257 KAALQSQMGLDVKPNSYLLGMVGRLVDQKGVDLLLQVARRLLAYTDSQIVVLGTGESALESALWQLATEYPGRFAVFLTYDDYLSRLIYAGTDAFLMPSRFEPCGISQLLAMRYGSIPVVRNVGGLVDTVSPHDPSKQTGTGFCFD--RFEPIDF--YTALVRSWEAYRHRRSWRRLQIRAMTQTYSWDRSAYEY-ENMYKDVCGVKEPSPDAEEV 467          

HSP 2 Score: 31.9574 bits (71), Expect = 2.462e-29
Identity = 10/19 (52.63%), Postives = 17/19 (89.47%), Query Frame = 2
Query:   32 RIKGIVNGMDVQEWNPLTD 88
            +++GI+NG+D+ +WNP TD
Sbjct:  220 KLRGILNGIDLDDWNPETD 238          
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBB (Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glgA PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.463e-29
Identity = 72/205 (35.12%), Postives = 109/205 (53.17%), Query Frame = 1
Query:   94 IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 702
            I   YD + + D K   K  LQ+E+GL V+ NIP+I  + RL  QKG D+L       ++ ++Q++++GTG K  E   + L+  Y  K     +F+  LAH   A +D  L+PS FEPCGL QL A+RYG++PIV  TGGL DT+     +TG   G    +  A + + +   +  +      Y     + ++KN M  + SW
Sbjct:  263 INKNYDVNNIND-KYENKRNLQSELGLSVNENIPMIAMVTRLTSQKGLDLLVHISERLLQNDIQLVIVGTGDKHYEDHFKWLDYKYGNKVSANIRFDNNLAHKAYAASDMFLMPSLFEPCGLGQLIALRYGSIPIVRETGGLKDTIRAYNEYTGEGNGFSFYNYNADELLHIIEYALKI-----YYDKNKWSNLVKNAMNSNNSW 461          

HSP 2 Score: 28.8758 bits (63), Expect = 2.463e-29
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 2
Query:   29 YRIKGIVNGMDVQEWNPLTDHI 94
            Y ++GI+NG+D  E+NP  D +
Sbjct:  241 YMLRGILNGIDYDEFNPKNDSL 262          
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_VIBSL (Glycogen synthase OS=Vibrio splendidus (strain LGP32) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.206e-29
Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 1
Query:  133 KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWK 705
            K   K+ LQ +VGLPV  +  V G + RL  QKG   L   I  F+K  +QI+++GTG   +  QL++L  L+ +K   V  +N  LAH++ AG+DF L+PS FEPCGL Q+++M YGT+PIV S GGL D+V       E  TGF          A +     A+   + R+L  Y      +  +    M QD SW+
Sbjct:  283 KSACKQKLQQDVGLPVT-DCAVYGMVCRLTNQKGVHYLLPIIEQFLKNELQIVIVGTGDPVLASQLKELSALHSDKFSFVEAYNNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGTLPIVRSVGGLKDSVNDYDQEPEIATGF----------AFEEPTPQALLAVLHRSLLLYAQNPSEIKRVQLYAMQQDFSWE 470          

HSP 2 Score: 26.1794 bits (56), Expect = 3.206e-29
Identity = 10/16 (62.50%), Postives = 11/16 (68.75%), Query Frame = 2
Query:   41 GIVNGMDVQEWNPLTD 88
            GI+NG D   WNP TD
Sbjct:  250 GILNGCDYGAWNPETD 265          
BLAST of EY659861 vs. ExPASy Swiss-Prot
Match: GLGA_MYCMO (Glycogen synthase OS=Mycoplasma mobile GN=glgA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.207e-29
Identity = 65/148 (43.92%), Postives = 93/148 (62.84%), Query Frame = 1
Query:   91 YIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN-VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 531
            YI  KYD S   +AK + K ALQ E+ L  ++ I +IG I RL  QKG D++  ++ + +K+N +Q +VLGTG    E  L+     YP   + + KF+  L+H + AG D  LIPS FEPCGL QL +++YG +PI  +TGGL+DT+
Sbjct:  261 YIEAKYDVSNYKEAKLINKIALQKELNLEQNKKIFLIGMISRLANQKGIDLVLNSLWNIVKDNDIQFVVLGTGDVNYESNLKSFGNKYPRNFKFINKFSDELSHKLYAGLDAFLIPSLFEPCGLTQLISLKYGCIPIARATGGLIDTI 408          

HSP 2 Score: 24.6386 bits (52), Expect = 3.207e-29
Identity = 8/19 (42.11%), Postives = 14/19 (73.68%), Query Frame = 2
Query:   32 RIKGIVNGMDVQEWNPLTD 88
            +++GI+NG+D   +NP  D
Sbjct:  241 KLRGIINGLDYDIFNPSID 259          
The following BLAST results are available for this feature:
BLAST of EY659861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_DECAR1.453e-2937.38Glycogen synthase OS=Dechloromonas aromatica (stra... [more]
GLGA_GEOUR1.453e-2936.49Glycogen synthase OS=Geobacter uraniireducens (str... [more]
GLGA_STRS71.453e-2939.52Glycogen synthase OS=Streptococcus equi subsp. zoo... [more]
GLGA_SYNS31.889e-2938.34Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_CHLPD1.891e-2934.36Glycogen synthase OS=Chlorobium phaeobacteroides (... [more]
GLGA_SERP51.892e-2933.64Glycogen synthase OS=Serratia proteamaculans (stra... [more]
GLGA_PROM42.462e-2936.57Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_CLOBB2.463e-2935.12Glycogen synthase OS=Clostridium botulinum (strain... [more]
GLGA_VIBSL3.206e-2938.19Glycogen synthase OS=Vibrio splendidus (strain LGP... [more]
GLGA_MYCMO3.207e-2943.92Glycogen synthase OS=Mycoplasma mobile GN=glgA PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659861 ID=EY659861; Name=EY659861; organism=Citrus sinensis; type=EST; length=886bp
TTCGAAAAACCACGCGTCCGATCCGTAATACCGCATTAAGGGAATTGTGA
ACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGACCATATATAGGTG
TCAAATATGATGCTTCAACTGTGATGGATGCGAAGCCTCTTCTGAAGGAA
GCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAAATATTCCTGTCAT
AGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGATATTCTTGCAG
CTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAATAGTCCTTGGT
ACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGATACTGTA
CCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCCTCTGGCGCATA
TGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCT
TGTGGTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGT
GGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGAT
TCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGAT
GTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTAC
TCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCAT
GGAAAGGACCCAGCTAGAAATGGGANGAGACCCTACTTAACCTGGAAAGT
GCTGGTAGTGAACCTGGAATTGACNGCGAAGAAATTGCTCCTCTTTGCAA
GAAAATGTGGCCACTCCTTGATCGAGGCTACAAAATCTCCACTTTTATTT
GGACCGCAACATGTTCCTGTAATTTCTCACACCCNA
back to top