EY659860

Overview
NameEY659860
Unique NameEY659860
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659860 vs. ExPASy Swiss-Prot
Match: S23A3_MOUSE (Solute carrier family 23 member 3 OS=Mus musculus GN=Slc23a3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.443e-17
Identity = 56/175 (32.00%), Postives = 93/175 (53.14%), Query Frame = 3 
Query:  207 TPMAPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGLMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAI--NGFGPVHTSGRWFNDMVNIPFSSEP-FVAGCVAFFLDNTL 722
            +P  P   SRG+  +G+G +L+GL G+  GT+ S  N G ++L + GSRRV  +     +   +  +   +F SIP P++  +  +  A V + G S     +++S R  FI+GFSIF+ L +P++  E   +   G+ P+        DM      +EP F+AG + F L+NT+
Sbjct:  348 SPPPPHACSRGLSLEGLGSVLAGLLGSPLGTASSFPNVGTVSLFQTGSRRVAHLVGLFCMGLGLSPRLAQLFTSIPLPVLGGVLGVTQAVVLSAGFSSFHLADIDSGRNVFIVGFSIFMALLLPRWLREAPVLLNTGWSPL--------DMFLRSLLAEPIFLAGLLGFLLENTI 514
[Close]
BLAST of EY659860 vs. ExPASy Swiss-Prot
Match: S23A3_HUMAN (Solute carrier family 23 member 3 OS=Homo sapiens GN=SLC23A3 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 53/173 (30.64%), Postives = 90/173 (52.02%), Query Frame = 3 
Query:  210 PMAPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGLMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRW--FNDMVNIPFSSEPFVAGCVAFFLDNTL 722
            P  P   SRG+  +G+G +L+GL G+  GT+ S  N G + L + GS++V  +   L +   +  +   +  +IP P+V  +  +  A V + G S     +++S R  FI+GFSIF+ L +P++F E        PV  S  W   + +++   +   F+AG   F L+NT+
Sbjct:  346 PPPPHACSRGLSLEGLGSVLAGLLGSPMGTASSFPNVGKVGLIQAGSQQVAHLVGLLCVGLGLSPRLAQLLTTIPLPVVGGVLGVTQAVVLSAGFSSFYLADIDSGRNIFIVGFSIFMALLLPRWFRE-------APVLFSTGWSPLDVLLHSLLTQPIFLAGLSGFLLENTI 511
The following BLAST results are available for this feature:
BLAST of EY659860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
S23A3_MOUSE1.443e-1732.00Solute carrier family 23 member 3 OS=Mus musculus ... [more]
S23A3_HUMAN3.554e-1630.64Solute carrier family 23 member 3 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659860 ID=EY659860; Name=EY659860; organism=Citrus sinensis; type=EST; length=922bp
CAATGGTAGCCTGCAGATACGGTCCGGAATTCTTCCCTATCGGGGGNGTN
NGATTGATGCTGCCTTCAGGAGGGAGTTNNGTGGNNNTTNNAATGGGGGG
NGNNTTNATTTGATGTTGGCGAAGATAATGGATGATGATGGNCTNNTTTG
TTGNTCTTGTTGAGTGAAGTGGTGGTTTTTTTGNGGTAGNANGGTATGGA
AGTGGAACTCCAATGGCACCTTCTGTTCTCAGCCGTGGTGTGGGTTGGCA
GGGAATTGGCATTTTGCTTTCTGGGTTATTTGGAACTGTAAACGGAACAT
CGGTGTCTGTAGAGAATGCTGGTCTTTTGGCCTTGACTAGAGTTGGCAGT
CGAAGGGTTGTCCAAATATCTGCTGGATTGATGATATTCTTCTCTGTTCT
TGGGAAATTTGGAGCAGTCTTTGCTTCAATTCCAGCACCGATTGTTGCTG
CTTTATATTGCCTTTTCTTTGCATATGTGGGTGCTGGAGGTCTTAGCTTC
CTTCAGTTCTGTAACCTCAACAGTTTCCGAGTAAAGTTCATATTAGGCTT
CTCTATCTTCATCGGTCTGTCTGTGCCCCAATACTTCAATGAGTACACTG
CCATTAATGGTTTCGGTCCAGTTCACACTAGTGGAAGATGGTTCAACGAT
ATGGTAAACATTCCTTTCTCGTCAGAACCATTTGTTGCTGGTTGTGTGGC
ATTTTTCCTCGACAACACACTGCATAAAAAGGATGGTCAAGTCAGGAAAG
ACAGGGGTAGGCATTGGTGGGAACAGTTCTGGTCCTTCAAGGCGACACAA
GAAGTGAAGAATTTTACTCCCTGCCCTTCAATTTAAACAATATTTCCCAT
CTGTGTGATCAATCGGTAACATGTATTGCTCTTTGGGAAGTTTCCAAAAG
TCTTGTGGGAAAAAACAAAATC
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