EY659832

Overview
NameEY659832
Unique NameEY659832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: PPM1L_BOVIN (Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 65/167 (38.92%), Postives = 87/167 (52.10%), Query Frame = 3
Query:  279 SSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYS--------HTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAXIC-RGGNAIAVSRDHXPDQTDERQRIEDAXGFCDVAGTXKVEGVFAV 752
            S  G+R  MED +E  +D        +FG+FDGHGG  AAEYVK  L   L +H +     K     +Y           D E L+       +AG+T   A+L    L VANVGDSR  +C + GNAI +S DH P Q  ER+RI+ A GF    G+ +V+G+ A+
Sbjct:   97 SIQGRRDHMEDRFEVLMDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSVLSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAM 263          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.619e-21
Identity = 65/167 (38.92%), Postives = 86/167 (51.50%), Query Frame = 3
Query:  279 SSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYS--------HTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAXIC-RGGNAIAVSRDHXPDQTDERQRIEDAXGFCDVAGTXKVEGVFAV 752
            S  G+R  MED +E   D        +FG+FDGHGG  AAEYVK  L   L +H +     K     +Y           D E L+       +AG+T   A+L    L VANVGDSR  +C + GNAI +S DH P Q  ER+RI+ A GF    G+ +V+G+ A+
Sbjct:   97 SIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSVLSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAM 263          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.619e-21
Identity = 67/183 (36.61%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  219 DSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIV-GLFGVFDGHGGARAAEYVKHNLFSNLIRH---PKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAXICRGGNAIAVSRDHXPDQTDERQRIEDAXGFCDVAGT-XKVEGVFAV 752
            D+P       +     Y      GKR +MED +   I  ++G+    +FGV+DGHGG  AAE+   NL SN++      +  S  + A+   Y  TDSEFLK +N +    GS   TA++    L+VAN GD RA +  GG A A++ DH P + DER RIE + G+ D   +  +++G  AV
Sbjct:  107 DTPREESRAVEREGDGYSVYCKRGKREAMEDRFSA-ITNLQGDPKQAIFGVYDGHGGPTAAEFAAKNLCSNILGEIVGGRNESKIEEAVKRGYLATDSEFLKEKNVKG---GSCCVTALISDGNLVVANAGDCRAVLSVGGFAEALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAV 285          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.114e-21
Identity = 65/167 (38.92%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  279 SSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYS--------HTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAXIC-RGGNAIAVSRDHXPDQTDERQRIEDAXGFCDVAGTXKVEGVFAV 752
            S  G+R  MED +E   D        +FG+FDGHGG  AAEYVK  L   L +H +     K      Y           D E L+       +AG+T   A+L    L VANVGDSR  +C + GNAI +S DH P Q  ER+RI+ A GF    G+ +V+G+ A+
Sbjct:   97 SIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSVLTYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAM 263          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.152e-21
Identity = 70/189 (37.04%), Postives = 105/189 (55.56%), Query Frame = 3
Query:  213 ADDSPASGGGLSQ-NGK-FSYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGD----RLLVANVGDSRAXICRGGNAIAVSRDHXPDQTDERQRIEDAXGFCD--VAGTXKVEGVFAV 752
            +   P +G G ++ +GK   +GY    GK +  MED+            +GLF +FDGH G    ++++ +LF N+++ P+F+S+ ++AI +AY  TD++ L+S     R  GSTA TAIL+       L+VANVGDSRA I + G A  +S DH P++  ER  IE   GF         +V+G  AV
Sbjct:   19 SSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQEGEHDLGLFAIFDGHLGHTVPDFLRSHLFDNILKQPEFLSNPQAAIRNAYQLTDAKILESAAELGR-GGSTAVTAILISSENSVNLVVANVGDSRAVISKSGVAKQLSVDHEPNK--ERHSIEKKGGFVSNLPGDVPRVDGQLAV 204          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.152e-21
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 3
Query:  279 SSPGKRSSMEDFYETRID--------GVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNR-DAGSTASTAILVGDRLLVANVGDSRAXICRGGNAIAVSRDHXPDQTDERQRIEDAXGFCD 713
            S  G R  MED +    D         V+ EI+  +GVFDGHGG  AA YV+ NL   ++    F  + +  +  ++  TDS+F +  ++QN   +G+TA TA++ G  LLVAN GD RA + R G AI +S+DH     +ER+RIE   G+ D
Sbjct:   59 SDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGVFDGHGGKDAAHYVRDNLPRVIVEDADFPLELEKVVRRSFVQTDSQFAERCSHQNALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIESLGGYVD 212          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.049e-20
Identity = 63/177 (35.59%), Postives = 95/177 (53.67%), Query Frame = 3
Query:  249 QNGKFSYG-----YASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFS---NLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAXICRGGNAIAVSRDHXPDQTDERQRIEDAXGFCD-VAGTXKVEGVFAV 752
            QNG  S+G       S  GK+  MED +      V       FGV+DGHGGA+AAE+V  NL      ++ + K   +   A   A+  TD +FL+    +   +G+   TA++    ++V+N+GD RA +CR G A A++ DH P + DE++RIE   G+ D   G  +V+G+ AV
Sbjct:  110 QNGTVSFGGNGFGVVSRNGKKKFMEDTHRIVPCLVGNSKKSFFGVYDGHGGAKAAEFVAENLHKYVVEMMENCKGKEEKVEAFKAAFLRTDRDFLE----KGVVSGACCVTAVIQDQEMIVSNLGDCRAVLCRAGVAEALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAV 282          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20
Identity = 68/182 (37.36%), Postives = 99/182 (54.40%), Query Frame = 3
Query:  222 SPASGGGLSQNGK-FSYGYASSPGKR-SSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVG-DRLLVANVGDSRAXICRGGNAIAVSRDHXPDQTDERQRIEDAXGFCD--VAGTXKVEGVFAV 752
            S  SG G S+  K  ++G+    GK    MED+   +   V+   +GLF +FDGH      +Y+  +LF N+++ P F  + + AI  AY  TD+  L   ++  +  GSTA TAIL+   +L+VANVGDSRA IC+ G A  +S DH P+   E+  IE+  GF         +V+G  AV
Sbjct:   26 SADSGKGKSKMLKQITHGFHLVKGKAFHEMEDYVVAKFKEVDDNELGLFAIFDGHLSHEIPDYLCSHLFENILKEPNFWQEPEKAIKKAYYITDTTILDKADDLGK-GGSTAVTAILINCQKLVVANVGDSRAVICQNGVAKPLSVDHEPNM--EKDEIENRGGFVSNFPGDVPRVDGQLAV 204          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20
Identity = 56/137 (40.88%), Postives = 83/137 (60.58%), Query Frame = 3
Query:  303 MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAXICRGGNAI-AVSRDHXPDQTDERQRIEDAXGF 707
            MEDF       V+G  +GL+ +FDGH G+  A+Y++++LF N++  P F  + K AI  AY  TD   L  +N      GSTA TAI++ G +++VANVGDSRA +CR  + +  ++ DH PD+  ER  ++   GF
Sbjct:    1 MEDFIVADTKTVKGHNLGLYAIFDGHSGSDVADYLQNHLFDNILSQPDFWRNPKKAIKRAYKSTDDYIL--QNVVGPRGGSTAVTAIVIDGKKIVVANVGDSRAILCRESDVVKQITVDHEPDK--ERDLVKSKGGF 133          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20
Identity = 61/151 (40.40%), Postives = 84/151 (55.63%), Query Frame = 3
Query:  261 FSYGYASSPGKRSSMEDFYETRIDGVE--GEIVGLF-GVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAXICRGGNAIAVSRDHXPDQTDERQRIEDAXG 704
            F  G  S  G + SMED +    D  E  G   G F GVFDGHGG  AA + K N+   ++    F + TK A   A+  TD   L   ++ +R +G+TA TA+++   +L+AN GDSRA + + G AI +S+DH P+ T ER RIE   G
Sbjct:   71 FRSGSWSDKGPKQSMEDEFICVDDLTEYIGSSTGAFYGVFDGHGGVDAASFTKKNIMKLVMEDKHFPTSTKKATRSAFVKTDHA-LADASSLDRSSGTTALTALILDKTMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGG 220          
The following BLAST results are available for this feature:
BLAST of EY659832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
PPM1L_BOVIN9.492e-2238.92Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2... [more]
PPM1L_HUMAN1.619e-2138.92Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]
P2C02_ARATH1.619e-2136.61Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
PPM1L_MOUSE2.114e-2138.92Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE... [more]
P2C62_ORYSJ6.152e-2137.04Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C27_ORYSJ6.152e-2138.96Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C14_ARATH1.049e-2035.59Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C39_ARATH1.790e-2037.36Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
P2C28_ARATH1.790e-2040.88Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
P2C47_ARATH2.338e-2040.40Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659832 ID=EY659832; Name=EY659832; organism=Citrus sinensis; type=EST; length=907bp
TCCTCAACCGAGGCGTCCGTAATTCGTGATATCGAAATGATCTAACGAAT
GTGCAATCACCTATTGTAACTAACCAAAACGCTGTCGCTGCTGCAGTTAT
TGCTTTCGTTGTTATTAATTTATTTTCTCTTCCGAGTGGTTAACGAATTG
GAACTTGAAGCGAAACCATGGGGTATTTGAACTCGGTGTTGTCATCTTCA
AGCCAGGTTCACGCCGATGATTCGCCGGCTAGCGGCGGGGGCCTTAGTCA
GAACGGAAAGTTCAGCTACGGATATGCGAGTTCTCCTGGCAAGAGGTCTT
CTATGGAAGATTTTTATGAGACCAGAATTGATGGCGTCGAAGGAGAGATA
GTAGGCCTCTTTGGAGTTTTTGATGGTCATGGGGGTGCACGAGCTGCTGA
GTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCATCCAAAGTTCA
TATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCACACAGACTCG
GAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTGGATCTACTGC
TTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCAAATGTGGGTG
ACTCCAGAGCTGNTATATGCAGGGGCGGTAATGCTATTGCCGTATCGCGA
GATCACAANCCAGACCAAACAGATGAGCGTCAACGGATTGAGGATGCANG
AGGNTTTTGTGATGTGGCTGGAACTTNGAAAGTGGAGGGAGTCTTTGCCG
TTCTCGCGCATTTGGTGACGACTCTTGAGCAAGATGNTGNTGCTGATCCC
GAATTTCAGAAGAAAGTATGAACACTCCCTGGAGTTCCTATCCTTGCAGG
GATGGACTTTGGATGTCGCCCCAATGAGGAGCTGTGCGATGATCACCCAT
CAGGATC
back to top