EY659803

Overview
NameEY659803
Unique NameEY659803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEP1 (NADH pyrophosphatase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=nudC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.430e-15
Identity = 51/150 (34.00%), Postives = 72/150 (48.00%), Query Frame = 2 
Query:  314 FGSKQLCFVELR--TVMVATDWADQRAMA------DLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            F  + +  +ELR  T +    W   RA           + G+A  +  W    RFCG CG+        +   C    C  R YPR+ P +I+LV     D +L +R  RFV  ++S +AGF EPGES ED ++RE  EE  +EV  + Y
Sbjct:   57 FDGQPVFLLELRSATDVPGCSWRGLRAFMLEGDFDTYKVLGYAAQIGTWAREHRFCGSCGQAMTQIRWERAMYCQ--PCDLRSYPRISPSMIVLVT--RGDEILLARSPRFVTGVYSTLAGFAEPGESAEDCLVREVREEVAVEVRNIQY 202
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEPW (NADH pyrophosphatase OS=Pseudomonas putida (strain W619) GN=nudC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.092e-15
Identity = 43/112 (38.39%), Postives = 60/112 (53.57%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            + G+A  +  W    RFCG CG+        +   C    C  R YPR+ P +I+LV     D +L +R  RFV  ++S +AGF EPGES ED ++RE  EE  +EV  + Y
Sbjct:   95 VLGYAAQIGTWAREHRFCGSCGQPMTQIRWERAMYCQ--PCDLRSYPRISPSMIVLVT--RGDEILLARSPRFVTGVYSTLAGFAEPGESAEDCLVREVREEVAVEVTNIQY 202
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEF5 (NADH pyrophosphatase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.210e-14
Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            + G+A  +  W    R+CG CG         +   C    C  R YPR+ P +I+L+     D +L +R  RFV  ++S +AGF EPGES ED ++RE  EE  IEV  + Y
Sbjct:   95 VLGYAAQIGTWAREHRYCGSCGRPMAQVPGERAMYCQ--PCDLRSYPRISPSMIVLIT--RGDEILLARSPRFVTGVYSTLAGFAEPGESAEDCLIREVREEVSIEVRNIQY 202
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SHISS (NADH pyrophosphatase OS=Shigella sonnei (strain Ss046) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +L ++ +R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SHIF8 (NADH pyrophosphatase OS=Shigella flexneri serotype 5b (strain 8401) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +L ++ +R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SHIDS (NADH pyrophosphatase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +L ++ +R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SHIBS (NADH pyrophosphatase OS=Shigella boydii serotype 4 (strain Sb227) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +L ++ +R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SHIB3 (NADH pyrophosphatase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +L ++ +R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEE4 (NADH pyrophosphatase OS=Pseudomonas entomophila (strain L48) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 43/112 (38.39%), Postives = 60/112 (53.57%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            + G+A  +  W    RFCG CG+        +   C    C  R YPR+ P +I+L+     D VL +R  RFV  ++S +AGF EPGES E+ ++RE  EE  IEV  + Y
Sbjct:   95 VLGYAAQIGTWAREHRFCGSCGQPMTQIHWERAMYCQ--PCDLRSYPRISPSMIVLIT--RGDEVLLARSPRFVTGVYSTLAGFAEPGESAEECLVREVREEVAIEVRNIQY 202
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PHOPR (NADH pyrophosphatase OS=Photobacterium profundum GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 59/203 (29.06%), Postives = 98/203 (48.28%), Query Frame = 2 
Query:  164 WISLGDCKIFLANSGIELKEEALVYLGSRSADDVVYWAIDVSDGDSLASEFGSKQLCFVELRTVMVATDWADQRAMADLA-----IAGHARALLEWHNVSRFCGHCGEKTIPKE---AGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            W  + D K++L ++ I L E++ +   + SA               +  E+    + ++E    + + D+  QR +  +      +AG A  L    +   FC  CG   +  +   A   +QCSNA      YPRV P +I+ V  R+ D++L ++  R    +++ IAGF+E GE+LE  V RE  EETGI+V  + Y +S
Sbjct:   15 WCVVNDRKLYLLDNAIPLLEKSELTFNTDSA--------------RVIGEYLDHPVYWLEANNCLHSDDFYTQRELLGIDQALFDLAGRATQLSHMLHTQSFCSVCGGAAVLADDQFAMVCQQCSNAQ-----YPRVSPCIIVAV--RKEDQILLAQHPRHKTGIYTVIAGFVEAGETLEQCVAREVEEETGIQVKNIRYFSS 196
The following BLAST results are available for this feature:
BLAST of EY659803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
NUDC_PSEP15.430e-1534.00NADH pyrophosphatase OS=Pseudomonas putida (strain... [more]
NUDC_PSEPW7.092e-1538.39NADH pyrophosphatase OS=Pseudomonas putida (strain... [more]
NUDC_PSEF51.210e-1437.50NADH pyrophosphatase OS=Pseudomonas fluorescens (s... [more]
NUDC_SHISS1.580e-1435.65NADH pyrophosphatase OS=Shigella sonnei (strain Ss... [more]
NUDC_SHIF81.580e-1435.65NADH pyrophosphatase OS=Shigella flexneri serotype... [more]
NUDC_SHIDS1.580e-1435.65NADH pyrophosphatase OS=Shigella dysenteriae serot... [more]
NUDC_SHIBS1.580e-1435.65NADH pyrophosphatase OS=Shigella boydii serotype 4... [more]
NUDC_SHIB31.580e-1435.65NADH pyrophosphatase OS=Shigella boydii serotype 1... [more]
NUDC_PSEE41.580e-1438.39NADH pyrophosphatase OS=Pseudomonas entomophila (s... [more]
NUDC_PHOPR1.580e-1429.06NADH pyrophosphatase OS=Photobacterium profundum G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659803 ID=EY659803; Name=EY659803; organism=Citrus sinensis; type=EST; length=953bp
GGTACATCTGTTAGACGGTCCGGATTCCTTCCCAAACGGGCGTCCGCATA
TTACCTTTCATTACTAGGCTTCTCCTGATTTCAAGGTCTTGCCTTTCAGA
AAGGGCAGGCTCTTGCCTTATATAATAGGCCCTGGTGAGACGGCGCCGGT
TTGGCATCTGGGTTGGATCAGTTTGGGTGATTGCAAGATTTTCTTGGCGA
ATTCTGGGATTGAGTTGAAGGAAGAGGCTTTGGTTTATCTGGGTTCTCGG
TCTGCGGATGATGTGGTTTATTGGGCAATTGATGTGTCTGACGGGGATAG
CTTGGCTTCTGAATTCGGTAGTAAACAATTATGCTTTGTGGAGCTGAGGA
CGGTTATGGTGGCTACTGATTGGGCTGATCAGCGGGCTATGGCTGATTTG
GCTATTGCCGGTCATGCCAGGGCATTACTAGAGTGGCATAATGTATCACG
GTTTTGTGGACATTGTGGGGAAAAAACAATCCCTAAGGAAGCTGGGAAAC
TGAAGCAGTGCTCAAATGCATCGTGCAAAAAGAGGATTTACCCTCGTGTT
GATCCAGTGGTCATTATGTTGGTCATTGACAGAGAGAATGATCGTGTACT
TTTCAGCAGACTATCAAGATTTGTCCCACGAATGTGGAGCTGCATAGCTG
GTTTTATAGAGCCTGGAGAAAGCTTAGAAGACGCAGTGATGAGAGAAACC
TGGGAAGAGACTGGCATTGAAGTGGGGGAAGTTGTCTATCATACTTCCTC
ACATGGCCAGTCGGCCCAAATAGCATGCCATGCCAGTTAATGGTGGGGTT
TTACGCCTTGCAAAATCGTTTGAGATAATGTGGTTAAAGAAGAGTTAGAA
ATGCCTCGGGGCACTCCTGAGAAATGTAAAAAGGCATTGACGTTTGCTGA
TACCTTTAGCCCAAAACCACACCTGCAAATTAAACAATTGCAAGAGAATT
AAA
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