EY659803

Overview
NameEY659803
Unique NameEY659803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5074 contig Csv1_Contig5074:33..999. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_YERPG (NADH pyrophosphatase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=nudC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+ I +  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_YERPE (NADH pyrophosphatase OS=Yersinia pestis GN=nudC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+ I +  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_YERPB (NADH pyrophosphatase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=nudC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+ I +  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_YERPA (NADH pyrophosphatase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=nudC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+ I +  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_YERP3 (NADH pyrophosphatase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=nudC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+ I +  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_ACTSZ (NADH pyrophosphatase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=nudC PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.643e-11
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 2 
Query:  449 RFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPR-----MWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            R CG CG +T         QC N +C  R YP + P +I+ V  R    +L +  +R +P+     M++ +AGF+E GES E  V RE +EETG++V  + Y  S
Sbjct:   97 RRCGKCGHQTEMARDEWAVQCQNDACGYRTYPVICPSIIVAV--RRGKEILLANHTRHMPKNGGSGMYTTLAGFVEIGESFEQTVEREVFEETGLKVKNIRYFGS 199
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_ERWT9 (NADH pyrophosphatase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=nudC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.757e-11
Identity = 52/195 (26.67%), Postives = 91/195 (46.67%), Query Frame = 2 
Query:  164 WISLGDCKIFLANSGIELKEEALVYLGSRSADDVVYWAIDVSDGDSLASEFGSKQLCFVELRTVMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            W+   + KI+L    +   + A + L   S   +  W      G+++    GS+      LR ++        R  A   +AG    L E+    ++CG+CG K           C +  C++R YP++ P +I+ +  R    +L ++ +R    +++ +AGF+E GE+LE  V RE  EE+ I+V  + Y TS
Sbjct:   13 WVVSEEHKIWLPAGELPHGDAASLGLAGSSGSRIGEW-----QGEAVWLIRGSRPDDMGSLRQLL-------DRDSALFRLAGRGIQLAEFFRSHQWCGYCGHKMHNSRTEWACLCHH--CRQRYYPQIAPCIIVAI--RRGAEILLAQHTRHRNGIYTVLAGFVEVGETLEQTVAREVMEESSIKVKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_VIBSL (NADH pyrophosphatase OS=Vibrio splendidus (strain LGP32) GN=nudC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11
Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 2 
Query:  332 CFVELRTVMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            C VE+   MV+         +   IA  A          RFC  CG +          QC +  C+   YPR+ P +I+ V  R ++++L ++  R    M++ IAGF+E GE+LE  V RE  EETGI+V  + Y  S
Sbjct:   62 CDVEIELSMVSLRDLLHWPESSFLIASKAIQYGHMTQSMRFCPQCGGRNHLNHNQVAMQCGD--CRTLHYPRIFPCIIVAV--RNDNKILLAQHPRHKTGMYTVIAGFLEVGETLEQCVAREVKEETGIDVSNIRYFGS 196
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_VIBPA (NADH pyrophosphatase OS=Vibrio parahaemolyticus GN=nudC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.213e-11
Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 2 
Query:  449 RFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            RFC  CG +          QC    C+   YPR+ P +I+ V  R+ +++L ++  R    M++ IAGF+E GE+LED V RE  EETGI V  + Y  S
Sbjct:  101 RFCPQCGGRNFLNNNQFAMQCGE--CRTLHYPRIFPCIIVAV--RKENQILLAQHPRHRNGMYTVIAGFLEAGETLEDCVAREVHEETGIHVKNIRYFGS 196
The following BLAST results are available for this feature:
BLAST of EY659803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
NUDC_YERPG3.295e-1234.78NADH pyrophosphatase OS=Yersinia pestis bv. Antiqu... [more]
NUDC_YERPE3.295e-1234.78NADH pyrophosphatase OS=Yersinia pestis GN=nudC PE... [more]
NUDC_YERPB3.295e-1234.78NADH pyrophosphatase OS=Yersinia pseudotuberculosi... [more]
NUDC_YERPA3.295e-1234.78NADH pyrophosphatase OS=Yersinia pestis bv. Antiqu... [more]
NUDC_YERP33.295e-1234.78NADH pyrophosphatase OS=Yersinia pseudotuberculosi... [more]
NUDC_ACTSZ3.643e-1137.14NADH pyrophosphatase OS=Actinobacillus succinogene... [more]
NUDC_ERWT94.757e-1126.67NADH pyrophosphatase OS=Erwinia tasmaniensis (stra... [more]
NUDC_VIBSL6.213e-1133.09NADH pyrophosphatase OS=Vibrio splendidus (strain ... [more]
NUDC_VIBPA6.213e-1139.00NADH pyrophosphatase OS=Vibrio parahaemolyticus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659803 ID=EY659803; Name=EY659803; organism=Citrus sinensis; type=EST; length=953bp
GGTACATCTGTTAGACGGTCCGGATTCCTTCCCAAACGGGCGTCCGCATA
TTACCTTTCATTACTAGGCTTCTCCTGATTTCAAGGTCTTGCCTTTCAGA
AAGGGCAGGCTCTTGCCTTATATAATAGGCCCTGGTGAGACGGCGCCGGT
TTGGCATCTGGGTTGGATCAGTTTGGGTGATTGCAAGATTTTCTTGGCGA
ATTCTGGGATTGAGTTGAAGGAAGAGGCTTTGGTTTATCTGGGTTCTCGG
TCTGCGGATGATGTGGTTTATTGGGCAATTGATGTGTCTGACGGGGATAG
CTTGGCTTCTGAATTCGGTAGTAAACAATTATGCTTTGTGGAGCTGAGGA
CGGTTATGGTGGCTACTGATTGGGCTGATCAGCGGGCTATGGCTGATTTG
GCTATTGCCGGTCATGCCAGGGCATTACTAGAGTGGCATAATGTATCACG
GTTTTGTGGACATTGTGGGGAAAAAACAATCCCTAAGGAAGCTGGGAAAC
TGAAGCAGTGCTCAAATGCATCGTGCAAAAAGAGGATTTACCCTCGTGTT
GATCCAGTGGTCATTATGTTGGTCATTGACAGAGAGAATGATCGTGTACT
TTTCAGCAGACTATCAAGATTTGTCCCACGAATGTGGAGCTGCATAGCTG
GTTTTATAGAGCCTGGAGAAAGCTTAGAAGACGCAGTGATGAGAGAAACC
TGGGAAGAGACTGGCATTGAAGTGGGGGAAGTTGTCTATCATACTTCCTC
ACATGGCCAGTCGGCCCAAATAGCATGCCATGCCAGTTAATGGTGGGGTT
TTACGCCTTGCAAAATCGTTTGAGATAATGTGGTTAAAGAAGAGTTAGAA
ATGCCTCGGGGCACTCCTGAGAAATGTAAAAAGGCATTGACGTTTGCTGA
TACCTTTAGCCCAAAACCACACCTGCAAATTAAACAATTGCAAGAGAATT
AAA
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