EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8139 contig Csv1_Contig8139:750..1598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_METSB (Glycogen synthase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 2 
Query:   98 PEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 490
            P +   V   +  +AH I AGAD I+IPSRFEPCGL QL A+RYG +PIVA  GGL DT+ +              +   P      +T  R A      +   E+++NGM  D+SW+ PA  + +   +L
Sbjct:  349 PGRVGAVIGYDEAIAHRIQAGADAIVIPSRFEPCGLTQLCALRYGALPIVARVGGLADTIIDANEMALASGIGTGLQFSPPTADMLGATLERAARLWAEPEIWDELIENGMLTDVSWRRPAALYAKLFRDL 479
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_GEOUR (Glycogen synthase OS=Geobacter uraniireducens (strain Rf4) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 2 
Query:   86 EILYPEKARGVSQLNI------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 475
            ++L   KARG   +++       LA  I AG+D  L+PS +EPCGL Q+ A+RYG VP+V  TGGL DTV +     Q G+   +  + +     A+  TV R+L  +  + A  ++MK GM+ D SW   A+++EE
Sbjct:  341 KLLQDIKARGAGNISVNIGFHPELAPKIYAGSDIFLMPSHYEPCGLGQMIALRYGAVPLVRKTGGLADTVFDE----QDGATEPNGFSFEDYTPEALWETVSRSLQAFDDKGAWKKLMKRGMSCDYSWDASARRYEE 473
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FRATW (Glycogen synthase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 490
            AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  368 AHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FRATT (Glycogen synthase OS=Francisella tularensis subsp. tularensis GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 490
            AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  368 AHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FRATO (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 496
            AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DT+ +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL +
Sbjct:  368 AHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTIIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNLVI 486
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FRATM (Glycogen synthase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 490
            AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  368 AHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLVIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FRATH (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 496
            AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DT+ +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL +
Sbjct:  368 AHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTIIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNLVI 486
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FRATF (Glycogen synthase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 496
            AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DT+ +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL +
Sbjct:  368 AHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTIIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNLVI 486
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FRAT1 (Glycogen synthase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 490
            AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  368 AHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVIDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_DEIDV (Glycogen synthase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 50/116 (43.10%), Postives = 66/116 (56.90%), Query Frame = 2 
Query:  125 LNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKW 469
            +N  LAH I AG+D   +PSRFEPCGL Q+ AMRYGT+P+V  TGGLVDTV     GF+            P    A+    ++A A +  Q+  E  +   MA D SW GPA+++
Sbjct:  332 MNEALAHQIYAGSDAFAMPSRFEPCGLSQMIAMRYGTLPVVRETGGLVDTVPPD-VGFRF----------QPATPEALVEACQQARAAFEDQSDWEARVARAMALDFSWDGPAREY 436
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA_METSB6.983e-1637.40Glycogen synthase OS=Methylocella silvestris (stra... [more]
GLGA_GEOUR6.983e-1637.96Glycogen synthase OS=Geobacter uraniireducens (str... [more]
GLGA_FRATW6.983e-1638.58Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATT6.983e-1638.58Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATO6.983e-1637.21Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATM6.983e-1638.58Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATH6.983e-1637.21Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRATF6.983e-1637.21Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRAT16.983e-1638.58Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_DEIDV6.983e-1643.10Glycogen synthase OS=Deinococcus deserti (strain V... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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