EY659796

Overview
NameEY659796
Unique NameEY659796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12295 contig Csv1_Contig12295:1070..1873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEB2 (Xaa-Pro dipeptidase OS=Shewanella baltica (strain OS223) GN=pepQ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.079e-14
Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 1
Query:   43 GNVDEMMAARLGAVPMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            G+V  ++   + +   PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ +S  +  N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  314 GDVQGLVDQGITSAFFPHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDSRGQQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEAM (Xaa-Pro dipeptidase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=pepQ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.716e-14
Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1
Query:   43 GNVDEMMAARLGAVPMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            G   +++   + +V  PHGLGH LG+  HD  G+    +GT  +       LR  R L  R V+T+EPG Y ID+LL   ++ +  ++  N +++   + FGG+RIE +V+V    ++NMT
Sbjct:  314 GEASDLVEQGVTSVFFPHGLGHMLGLQVHDVAGFAHDERGTHLAAPERHPFLRCTRVLAPRHVLTIEPGFYIIDSLLT-ELKADGRAEAVNWDMVNTLRPFGGIRIEDNVIVHQERNENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEFN (Xaa-Pro dipeptidase OS=Shewanella frigidimarina (strain NCIMB 400) GN=pepQ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14
Identity = 43/121 (35.54%), Postives = 64/121 (52.89%), Query Frame = 1
Query:   43 GNVDEMMAARLGAVPMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            G  ++++A  + +   PHGLGH LG+  HD GGY    +GT  +       LR  R L    V+T+EPG Y ID LL     + +  +  N   +   + FGG+RIE +V+V  +  +NMT
Sbjct:  314 GTAEQLVAQGVTSAFFPHGLGHMLGLQVHDMGGYSHDERGTHIAAPEAHPFLRCTRVLAANQVLTIEPGLYIIDTLL--NQLSATAKQAINWTTVDEMRPFGGIRIEDNVIVHQDRVENMT 432          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHESH (Xaa-Pro dipeptidase OS=Shewanella sediminis (strain HAW-EB3) GN=pepQ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.632e-14
Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1
Query:   43 GNVDEMMAARLGAVPMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            G+ + ++   + +V  PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID+LL   ++ ++     N   +   + FGG+RIE +V+V ++ ++NMT
Sbjct:  314 GDREGLIEQGITSVFFPHGLGHMLGLQVHDMGGFLHDERGTHIAAPDAHPFLRCTRTLAANQVLTIEPGLYIIDSLL-QGLKQDNRQHQVNWNSVDLLRPFGGIRIEDNVIVHSDKNENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEB5 (Xaa-Pro dipeptidase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=pepQ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.632e-14
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 1
Query:   43 GNVDEMMAARLGAVPMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            G+V  ++   + +   PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ ++  +  N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  314 GDVQGLVDQGITSAFFPHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDNRGQQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEB8 (Xaa-Pro dipeptidase OS=Shewanella baltica (strain OS185) GN=pepQ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.050e-14
Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 1
Query:   91 PHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ +S  +  N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  330 PHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDSRGQQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEON (Xaa-Pro dipeptidase OS=Shewanella oneidensis GN=pepQ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14
Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 1
Query:   43 GNVDEMMAARLGAVPMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            G+   ++   + +   PHGLGH LG+  HD GG+    +GT          LR  R L    V+T+EPG Y ID+LL    +N S  K  N   +   + FGG+RIE +V+V  + ++NMT
Sbjct:  314 GDAQGLVEQGITSAFFPHGLGHMLGLQVHDVGGFAFDERGTHIPAPEAHPFLRCTRILAPNQVLTMEPGLYIIDSLLNELKQN-SRGKQINWNSVDELRPFGGIRIEDNVVVHQDRNENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHESW (Xaa-Pro dipeptidase OS=Shewanella sp. (strain W3-18-1) GN=pepQ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   91 PHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ +S     N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  330 PHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDSRGLQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEPC (Xaa-Pro dipeptidase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=pepQ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   91 PHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ +S     N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  330 PHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDSRGLQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_STRMK (Xaa-Pro dipeptidase OS=Stenotrophomonas maltophilia (strain K279a) GN=pepQ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.760e-13
Identity = 42/111 (37.84%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   73 LGAVPMPHGLGHFLGIDTHDPGGYPKGTE--RSKEP-GLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            + A   PHG+GH +G+  HD  G+    E  R + P G   LR  R L+  MV+T+EPG YFID +L+  +++       N E +  F+ +GG+RIE +VL T   + N+T
Sbjct:  325 VSAAFFPHGIGHLIGLQVHDVAGFAASDEGGRIERPAGHPYLRLTRVLEPGMVVTIEPGLYFID-MLLNEVKDAGHGDAINWERVDFFRPYGGIRIEDEVLCTDGEADNLT 434          
The following BLAST results are available for this feature:
BLAST of EY659796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
PEPQ_SHEB22.079e-1435.54Xaa-Pro dipeptidase OS=Shewanella baltica (strain ... [more]
PEPQ_SHEAM2.716e-1434.71Xaa-Pro dipeptidase OS=Shewanella amazonensis (str... [more]
PEPQ_SHEFN3.547e-1435.54Xaa-Pro dipeptidase OS=Shewanella frigidimarina (s... [more]
PEPQ_SHESH4.632e-1434.71Xaa-Pro dipeptidase OS=Shewanella sediminis (strai... [more]
PEPQ_SHEB54.632e-1434.71Xaa-Pro dipeptidase OS=Shewanella baltica (strain ... [more]
PEPQ_SHEB86.050e-1439.05Xaa-Pro dipeptidase OS=Shewanella baltica (strain ... [more]
PEPQ_SHEON7.901e-1436.36Xaa-Pro dipeptidase OS=Shewanella oneidensis GN=pe... [more]
PEPQ_SHESW1.348e-1339.05Xaa-Pro dipeptidase OS=Shewanella sp. (strain W3-1... [more]
PEPQ_SHEPC1.348e-1339.05Xaa-Pro dipeptidase OS=Shewanella putrefaciens (st... [more]
PEPQ_STRMK1.760e-1337.84Xaa-Pro dipeptidase OS=Stenotrophomonas maltophili... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-B09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659796 ID=EY659796; Name=EY659796; organism=Citrus sinensis; type=EST; length=804bp
CAAAAAAGGCGGCGTCCGCGCTGAATTGCTAAAAAAATGGTTGGGAATGT
GGATGAGATGATGGCTGCACGATTGGGTGCTGTTCCCATGCCTCATGGTC
TTGGGCATTTCTTGGGTATTGACACTCATGATCCTGGCGGCTACCCAAAG
GGAACAGAAAGATCAAAAGAACCTGGCTTAAAATCTCTACGTACAGTTAG
AGAACTCCAGGAGAGAATGGTGATCACAGTGGAGCCTGGATGTTATTTCA
TTGATGCTCTGTTGGTCCCGGCCATGGAAAATGAAAGCACTTCCAAGTTT
TTTAATCATGAAGTAATTGGCAGATTCAAAGATTTTGGCGGTGTTCGCAT
TGAAAGTGATGTGCTTGTCACTGCCAATGGAAGCAAGAACATGACTAGCG
TACCTCGGGAAATATCAGATATTGAAGCCATAATGGCAGGCGCTCCATGG
CCTTCTAACAAGACTGCTCCATCAAATAGTTGAAAGTAGTGCCAAAGATC
TAAGAATAAGGCTCTGTTAGTGGAAGTTTTGGTCATAAACACCAAATTTC
TTGTTAGAATTATGAGCCAATTATTTTGAAACTGGAACTCTGAAACTAGA
ATTTTATCAAATGGCAAGTGCTTGTCGTTCTCACAATTGAATTTGAGTGG
TTAGCTTGGACAAAAGTTGTCTCTGTGTAAATGAATGGGGAAGAAAGTAA
TCCACTATGTTCTTTTCTTTAGAGATATGCATATGGTTTTCGTCACAGGA
CCAATAGATAATTTTTACTTCGGTTTGAAGATACATTTAAAAAAAAAAAA
AAAA
back to top