EY659796

Overview
NameEY659796
Unique NameEY659796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12295 contig Csv1_Contig12295:1070..1873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHELP (Xaa-Pro dipeptidase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=pepQ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15
Identity = 42/125 (33.60%), Postives = 72/125 (57.60%), Query Frame = 1
Query:   31 KKMVGNVDEMMAARLGAVPMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            K + G+   ++   + +   PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID+LL   ++ +  + + N +++ + + FGG+RIE +V+V ++ ++NMT
Sbjct:  310 KLVQGDPQGLIEQGITSAFFPHGLGHMLGLQVHDMGGFLHDERGTHIAPPEAHPFLRCTRTLAANQVLTIEPGLYIIDSLL-NELKQDGRADWINWQMVDQVRPFGGIRIEDNVIVHSDHNENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEHH (Xaa-Pro dipeptidase OS=Shewanella halifaxensis (strain HAW-EB4) GN=pepQ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15
Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 1
Query:   43 GNVDEMMAARLGAVPMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            G+V  ++   + +V  PHGLGH LGI  HD GG+    KG   +       LR  REL    V+T+EPG Y ID+LL    +++  S+  N   +   + FGG+RIE +V+V  +  +NMT
Sbjct:  314 GDVQGLVEQGITSVFFPHGLGHMLGIQVHDMGGFLGDDKGAHIAVPEAHPFLRCTRELDVNQVLTIEPGVYIIDSLLNELKQDKRQSQ-INWNTVEVLRPFGGIRIEDNVIVHRDRIENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEPW (Xaa-Pro dipeptidase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=pepQ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.334e-15
Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = 1
Query:   91 PHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            PHGLGH LG+  HD GG+    KGT  +       LR  R L E  V+T+EPG Y ID+LL   ++ ++  +  N   +   + FGG+RIE +V+V  + ++NMT
Sbjct:  330 PHGLGHMLGLQVHDMGGFLADEKGTHIASPAEHPFLRCTRTLAENQVLTIEPGVYIIDSLLA-QLKQDNRQQQVNWNTVDILRPFGGIRIEDNVIVHCDRTENMT 433          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ1_IDILO (Xaa-Pro dipeptidase 1 OS=Idiomarina loihiensis GN=pepQ1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.219e-14
Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 1
Query:   52 DEMMAARLGAVPMPHGLGHFLGIDTHDPGGYP---KGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            ++M+   +  V +PHGLGH LG+  HD G      +GT  +   G  +L+T R ++ R V T+EPG YFI+ LL   + N       N   +  FK FGGVRIE +++V    + N+T
Sbjct:  320 EQMIEDGITTVFLPHGLGHPLGLQVHDVGAAQADERGTPIAPPSGHLTLKTTRTVEPRQVYTIEPGIYFIEPLL-QKLANSRNKHLINWRRVDEFKPFGGVRIEDNIVVYRERNDNLT 436          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_XANCB (Xaa-Pro dipeptidase OS=Xanthomonas campestris pv. campestris (strain B100) GN=pepQ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 1
Query:   61 MAARLGAVPMPHGLGHFLGIDTHDPGGYP---KGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            +A  + A   PHGLGH +G+  HD  G+    +G    +  G   LR  R L+  MV+T+EPG YFID LL    +N   +   N + + +F  +GG+RIE +V+ T    +N+T
Sbjct:  321 LATGVSAAFFPHGLGHLIGLQVHDVAGFAASDRGGRIERPDGHPYLRLTRMLEPGMVVTIEPGVYFIDMLLDEVKKNGHAAS-VNWDRVAQFAPYGGIRIEDEVVCTDGAPENLT 434          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_PECCP (Xaa-Pro dipeptidase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=pepQ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1
Query:   88 MPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            +PHGLGH LG+  HD  G+    +GT  +       LR  R L+  MV+T+EPG YFI++LL P  E E   + F+ + +   K FGG+RIE ++++     +NMT
Sbjct:  333 LPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPSQYPYLRCTRVLEPGMVMTIEPGIYFIESLLAPWREGE-LCQHFDWQKVDALKPFGGIRIEDNIVIHDGRVENMT 437          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_COLP3 (Xaa-Pro dipeptidase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=pepQ PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14
Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1
Query:   46 NVDEMMAARLGAVP--MPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            NVD   A   G +    PHGLGH LG+  HD GG+    +GT  +       LRT R ++   V T+EPG YFID+LL   ++  + +   N + +   + FGG+RIE +++V  + ++NMT
Sbjct:  317 NVDADTAVESGIISTFFPHGLGHHLGLQVHDVGGFMADERGTHVNTPAEHPFLRTSRVIETNQVFTIEPGLYFIDSLLAD-LKASANADQVNWQNVDEMRCFGGIRIEDNIIVHQSHNENMT 437          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_XANCP (Xaa-Pro dipeptidase OS=Xanthomonas campestris pv. campestris GN=pepQ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.079e-14
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 1
Query:   61 MAARLGAVPMPHGLGHFLGIDTHDPGGYP---KGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            +A  + A   PHGLGH +G+  HD  G+    +G    +  G   LR  R L+  MV+T+EPG YFID LL    +N   +   N + + +F  +GG+RIE +V+ T    +N+T
Sbjct:  321 LATGVSAAFFPHGLGHLIGLQVHDVAGFAASDRGGRIERPDGHPYLRLTRVLEPGMVVTIEPGVYFIDMLLDEVKKNGHAAS-VNWDRVAQFAPYGGIRIEDEVVCTDGDPENLT 434          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_XANC8 (Xaa-Pro dipeptidase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=pepQ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.079e-14
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 1
Query:   61 MAARLGAVPMPHGLGHFLGIDTHDPGGYP---KGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            +A  + A   PHGLGH +G+  HD  G+    +G    +  G   LR  R L+  MV+T+EPG YFID LL    +N   +   N + + +F  +GG+RIE +V+ T    +N+T
Sbjct:  321 LATGVSAAFFPHGLGHLIGLQVHDVAGFAASDRGGRIERPDGHPYLRLTRVLEPGMVVTIEPGVYFIDMLLDEVKKNGHAAS-VNWDRVAQFAPYGGIRIEDEVVCTDGDPENLT 434          
BLAST of EY659796 vs. ExPASy Swiss-Prot
Match: PEPQ_SHEB9 (Xaa-Pro dipeptidase OS=Shewanella baltica (strain OS195) GN=pepQ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.079e-14
Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 1
Query:   43 GNVDEMMAARLGAVPMPHGLGHFLGIDTHDPGGY---PKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 396
            G+V  ++   + +   PHGLGH LG+  HD GG+    +GT  +       LR  R L    V+T+EPG Y ID LL   ++ +S  +  N + +   + FGG+RIE +V+V  + ++NMT
Sbjct:  314 GDVQGLIDQGITSAFFPHGLGHMLGLQVHDVGGFSHDERGTHIAAPEAHPFLRCTRILAPNQVLTMEPGLYIIDTLL-NELKQDSRGQQINWQTVDELRPFGGIRIEDNVIVHQDRNENMT 433          
The following BLAST results are available for this feature:
BLAST of EY659796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
PEPQ_SHELP7.146e-1533.60Xaa-Pro dipeptidase OS=Shewanella loihica (strain ... [more]
PEPQ_SHEHH7.146e-1538.02Xaa-Pro dipeptidase OS=Shewanella halifaxensis (st... [more]
PEPQ_SHEPW9.334e-1540.00Xaa-Pro dipeptidase OS=Shewanella piezotolerans (s... [more]
PEPQ1_IDILO1.219e-1437.29Xaa-Pro dipeptidase 1 OS=Idiomarina loihiensis GN=... [more]
PEPQ_XANCB1.592e-1436.52Xaa-Pro dipeptidase OS=Xanthomonas campestris pv. ... [more]
PEPQ_PECCP1.592e-1439.62Xaa-Pro dipeptidase OS=Pectobacterium carotovorum ... [more]
PEPQ_COLP31.592e-1436.89Xaa-Pro dipeptidase OS=Colwellia psychrerythraea (... [more]
PEPQ_XANCP2.079e-1436.52Xaa-Pro dipeptidase OS=Xanthomonas campestris pv. ... [more]
PEPQ_XANC82.079e-1436.52Xaa-Pro dipeptidase OS=Xanthomonas campestris pv. ... [more]
PEPQ_SHEB92.079e-1435.54Xaa-Pro dipeptidase OS=Shewanella baltica (strain ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-B09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659796 ID=EY659796; Name=EY659796; organism=Citrus sinensis; type=EST; length=804bp
CAAAAAAGGCGGCGTCCGCGCTGAATTGCTAAAAAAATGGTTGGGAATGT
GGATGAGATGATGGCTGCACGATTGGGTGCTGTTCCCATGCCTCATGGTC
TTGGGCATTTCTTGGGTATTGACACTCATGATCCTGGCGGCTACCCAAAG
GGAACAGAAAGATCAAAAGAACCTGGCTTAAAATCTCTACGTACAGTTAG
AGAACTCCAGGAGAGAATGGTGATCACAGTGGAGCCTGGATGTTATTTCA
TTGATGCTCTGTTGGTCCCGGCCATGGAAAATGAAAGCACTTCCAAGTTT
TTTAATCATGAAGTAATTGGCAGATTCAAAGATTTTGGCGGTGTTCGCAT
TGAAAGTGATGTGCTTGTCACTGCCAATGGAAGCAAGAACATGACTAGCG
TACCTCGGGAAATATCAGATATTGAAGCCATAATGGCAGGCGCTCCATGG
CCTTCTAACAAGACTGCTCCATCAAATAGTTGAAAGTAGTGCCAAAGATC
TAAGAATAAGGCTCTGTTAGTGGAAGTTTTGGTCATAAACACCAAATTTC
TTGTTAGAATTATGAGCCAATTATTTTGAAACTGGAACTCTGAAACTAGA
ATTTTATCAAATGGCAAGTGCTTGTCGTTCTCACAATTGAATTTGAGTGG
TTAGCTTGGACAAAAGTTGTCTCTGTGTAAATGAATGGGGAAGAAAGTAA
TCCACTATGTTCTTTTCTTTAGAGATATGCATATGGTTTTCGTCACAGGA
CCAATAGATAATTTTTACTTCGGTTTGAAGATACATTTAAAAAAAAAAAA
AAAA
back to top