EY659785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_LYSSC (30S ribosomal protein S5 OS=Lysinibacillus sphaericus (strain C3-41) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.556e-14 Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 +L++ V+ V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ AK +++ V R +G T P V G+ G+ + + PA G G++A + VL+ AGI D+ + S GS + N V+A + L Sbjct: 11 ELEERVVTINRVAKVVKGGRRFRFTALVVVGDRNGHVGFGTGKAQEVPDAIRKAVEDAKKNLVEVPR------VG--GTTPHLVLGRFGAGEILIKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPI-NMVRATVQGL 145
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_HYDS0 (30S ribosomal protein S5 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.556e-14 Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 332 QIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 Q I TL + ++ ++++ + T+ G+R F A VV+GD G+VG G+ ++EV +I AI AK I P+ G T+P V G+ GS + PA RG G++A +K + + AG DV T GS+ N V+A F+ LLK Sbjct: 17 QGITTLDDIQFEERLLEAARTTRVTKGGKRFSFSALVVIGDKRGYVGFGLGKAREVPLSIAKAIEDAKKKTIRVPIVNG----------TIPHDVVGEYGSARIIAFPARRGTGVIAGGAAKPIFELAGYTDVLTKVVGSSNH-HNVVRAVFDALLK 162
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_CALS8 (30S ribosomal protein S5 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.556e-14 Identity = 55/143 (38.46%), Postives = 74/143 (51.75%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 LK+ V+ V K + G+R +F A VVVGD +GHVG G + E+ AIR AI AK +I V +G T+P + G G+ V + PAP G G++A + V + AGI D+ T S GS N V A E L Sbjct: 13 LKERVVNINRVAKVVKGGKRLKFSAIVVVGDENGHVGAGHGKAAEIPDAIRKAIEDAKKHLIEV------PIVGT--TIPHEAIGDFGASKVLIKPAPEGTGVIAGGAVRAVCELAGIKDIRTKSLGSNNP-ANVVHATIEAL 146
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BACSU (30S ribosomal protein S5 OS=Bacillus subtilis GN=rpsE PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.556e-14 Identity = 49/144 (34.03%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 +L++ ++ V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ AK ++I V +G T+P ++ G+ G+ + + PA G G++A + VL+ AG+ D+ + S GS + N ++A + L Sbjct: 10 ELEERLVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVEDAKKNLIEV------PMVGT--TIPHEIIGRFGAGNILLKPASEGTGVIAGGPVRAVLELAGVADILSKSLGSNTPI-NMIRATLQGL 144
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BACP2 (30S ribosomal protein S5 OS=Bacillus pumilus (strain SAFR-032) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.556e-14 Identity = 50/144 (34.72%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 +L++ ++ V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ AK ++I V +G T+P ++ G+ G+ V + PA G G++A + VL+ AG+ D+ + S GS + N ++A + L Sbjct: 10 ELEERLVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVEDAKKNLIEV------PMVGT--TIPHEIIGRFGAGNVLLKPASEGTGVIAGGPVRAVLELAGLADILSKSLGSNTPI-NMIRATLQGL 144
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BACA2 (30S ribosomal protein S5 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.556e-14 Identity = 49/144 (34.03%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 +L++ ++ V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ AK ++I V +G T+P ++ G+ G+ + + PA G G++A + VL+ AG+ D+ + S GS + N ++A + L Sbjct: 12 ELEERLVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVEDAKKNLIEV------PMVGT--TIPHEIIGRFGAGNILLKPASEGTGVIAGGPVRAVLELAGVADILSKSLGSNTPI-NMIRATLQGL 146
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_PELPB (30S ribosomal protein S5 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.033e-14 Identity = 53/140 (37.86%), Postives = 74/140 (52.86%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKA 775 LK++++ K + G+R F A VVVGD +GHVG G+ + EV AI I K +VI P+ +G T+P ++ K GS V M PA G G++A + VL+ AGI D+ T S GS+ N VKA Sbjct: 16 LKEKLVHINRTAKVVKGGKRFGFNAIVVVGDKEGHVGYGLGKANEVQDAIAKGIEDGKKNVIKVPIVKG----------TIPHQIVAKFGSAKVMMKPATPGTGLIAGGAVRAVLEMAGIHDILTKSLGSSNP-HNVVKA 144
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_VEREI (30S ribosomal protein S5 OS=Verminephrobacter eiseniae (strain EF01-2) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.655e-14 Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLL 793 L+++++ V K + G+ F A VVGD DG VG+G SKEV A++ A+ A+ +++ V + T+ VTG G+ V M PAP+GAGI+A + V + G+ D+ S GS+ N V+A F+ L+ Sbjct: 17 LREKMIAVNRVTKVVKGGRILGFAALTVVGDGDGRVGMGKGKSKEVPAAVQKAMEEARRNMVKVSL--------KNGTIHHNVTGHHGAAVVMMAPAPKGAGIIAGGPMRAVFEVLGVTDIVAKSHGSSNPY-NMVRATFDALV 151
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_STAHJ (30S ribosomal protein S5 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.655e-14 Identity = 52/144 (36.11%), Postives = 76/144 (52.78%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 + ++ V+ V K + G+R RF A VVVGD +G VG G ++EV AI+ A+ AK ++ V R T P +TG+ GS +V M PA G G++A + VL+ AGI D+ + S GS + N V+A L Sbjct: 10 EFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPR--------VEGTTPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPI-NMVRATINGL 144
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_MYCMS (30S ribosomal protein S5 OS=Mycoplasma mycoides subsp. mycoides SC GN=rpsE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.655e-14 Identity = 52/144 (36.11%), Postives = 79/144 (54.86%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 + +++V+ V K T+ G+ RF A VVVG+ G VG+G + EV AI+ AI AK +++ V R TVP +V G G+ + + PA G GI+A ++ V++ AGI DV+ S GS + N ++A FE L Sbjct: 47 EFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGNKKGLVGMGTGKANEVPEAIKKAIKEAKKNLVSVTL--------RNTTVPHEVLGTFGAGKILIKPAKVGTGIIAGGPARAVIELAGISDVYAKSLGSNNAI-NMIRATFEGL 181 The following BLAST results are available for this feature:
BLAST of EY659785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659785 ID=EY659785; Name=EY659785; organism=Citrus sinensis; type=EST; length=944bpback to top |