EY659785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BURA4 (30S ribosomal protein S5 OS=Burkholderia ambifaria (strain MC40-6) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.993e-11 Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+++++ V K + G+ F A VVGD DG +G+G +KEV A++ A+ A+ ++ +P++ G T+ +V GK G+ V + PA G G++A + V G+ +V S GST N V+A + L K Sbjct: 17 LREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRIGMGKGKAKEVPVAVQKAMEQARRNMFKVPLKNG----------TLQHEVHGKHGASAVLLAPAKAGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPY-NLVRATLDGLRK 152
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BIFLO (30S ribosomal protein S5 OS=Bifidobacterium longum GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.993e-11 Identity = 53/148 (35.81%), Postives = 73/148 (49.32%), Query Frame = 2 Query: 353 GHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAK--LSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 G +L D V+ V K + G+ F A VVVGD +G VG+G S+EV AI + AK + +P RG T+ V G + TV + PA G G++A + V++ AGI DV T S GS T N V+A + L Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKHMFSVPRVRG----------TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGSA-TAVNVVRATVDAL 178
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BIFLI (30S ribosomal protein S5 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.993e-11 Identity = 53/148 (35.81%), Postives = 73/148 (49.32%), Query Frame = 2 Query: 353 GHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAK--LSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 G +L D V+ V K + G+ F A VVVGD +G VG+G S+EV AI + AK + +P RG T+ V G + TV + PA G G++A + V++ AGI DV T S GS T N V+A + L Sbjct: 52 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKHMFSVPRVRG----------TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGSA-TAVNVVRATVDAL 188
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_BIFLD (30S ribosomal protein S5 OS=Bifidobacterium longum (strain DJO10A) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.993e-11 Identity = 53/148 (35.81%), Postives = 73/148 (49.32%), Query Frame = 2 Query: 353 GHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAK--LSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 G +L D V+ V K + G+ F A VVVGD +G VG+G S+EV AI + AK + +P RG T+ V G + TV + PA G G++A + V++ AGI DV T S GS T N V+A + L Sbjct: 52 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKHMFSVPRVRG----------TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGSA-TAVNVVRATVDAL 188
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RR5_CYAPA (30S ribosomal protein S5, cyanelle OS=Cyanophora paradoxa GN=rps5 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.993e-11 Identity = 43/153 (28.10%), Postives = 75/153 (49.02%), Query Frame = 2 Query: 365 KDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKA-NFECLLKTYGFLTPD 820 ++ V++ V K + G++ F+A VV+G+ G VG+G+ + +V A++ A K V+ V + R +++P + G G+ V M P+ G G++A + VL+ AG+ ++ GS L N A N LKT+ D Sbjct: 18 QERVVQIRRVSKVVKGGKKLSFRAIVVIGNERGQVGVGIGKASDVINAVKKAAADGKKHVVEV-------PLTRSNSIPHPIDGIGGAARVIMRPSAEGTGVIAGGAVRTVLELAGVRNILAKQLGSNNPLNNARAAMNALSRLKTFSQFAKD 163 The following BLAST results are available for this feature:
BLAST of EY659785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659785 ID=EY659785; Name=EY659785; organism=Citrus sinensis; type=EST; length=944bpback to top |