EY659785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METST (30S ribosomal protein S5P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps5p PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.209e-36 Identity = 83/189 (43.92%), Postives = 117/189 (61.90%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 E W P T+LGR V++G+I ++QI LPI E +I+D L+ L++EVM VQ+ ++G++ F+ V VG+ +G+VGLG S+EV AIR A+ AK ++I VRRG WG GR HTVP K+ GK SV+ ++PAP G G+ V K +L AGI DV++ G T+T NF A F+ L Sbjct: 20 ENWEPKTELGRKVKDGEITDIDQILDKGLPIMELEIVDALLPD-LEEEVMDVNLVQRMHKSGRKVNFRVIVAVGNRNGYVGLGQGKSQEVGPAIRKAVDAAKYNLIKVRRGCGDWGCGCGRRHTVPFKIEGKMSSVSATLIPAPAGVGLAIGNVGKTILSLAGIADVWSMCSGQTQTTINFAGAVFDAL 207
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_META3 (30S ribosomal protein S5P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps5p PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.209e-36 Identity = 86/198 (43.43%), Postives = 124/198 (62.63%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL--LKTYGFL 811 + W P T++G+ V+EG I ++ I + LP+ E +I+D L+ L+++V+ VQ+ ++G+R RF+A VVG+ +G VG+G+ SKEV AIR AI AKLS+I VR G W G H++P G CGSV V ++PAPRG G+VA V+K VL AGI D++T + G T+T NF A F+ L L G+L Sbjct: 11 DAWEPKTQVGKKVKEGTITDIDYIIDNGLPLLEPEIVDALLPD-LEEQVLDVSLVQRMHKSGRRARFRATAVVGNRNGFVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRTGCGSWECGCGTAHSIPFAAKGSCGSVKVELLPAPRGVGLVAGNVAKAVLGLAGIKDIWTKTFGDTRTTYNFAIATFDSLNNLNFVGYL 207
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_METB6 (30S ribosomal protein S5P OS=Methanoregula boonei (strain 6A8) GN=rps5p PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.497e-36 Identity = 81/194 (41.75%), Postives = 123/194 (63.40%), Query Frame = 2 Query: 224 EEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKT 799 E+ +W PVT LG+ V G+I+S++Q+ PIKE +I+D + L+DEV+ +Q+ T +G+R +F+A V+VG+ +G++G G +V AI+ AI AK++++ VRRG W H++P +V G GSV V + PAP+G G+V +SKKVL+ AGI D +T +RG T+T NF KA F L +T Sbjct: 4 EKAEWRPVTGLGKQVASGEIKSIDQVLESGRPIKEPEIVDMFLPD-LEDEVLDIAMMQRMTDSGRRVQFRAVVIVGNRNGYIGFGQGKDVQVGDAIKKAITKAKMNLVKVRRGCGSWECGCAVLHSIPMQVEGTAGSVRVTLKPAPQGIGLVTGDISKKVLELAGIKDAWTFARGQTRTTINFAKATFNALKET 196
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_NANEQ (30S ribosomal protein S5P OS=Nanoarchaeum equitans GN=rps5p PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.768e-34 Identity = 88/204 (43.14%), Postives = 122/204 (59.80%), Query Frame = 2 Query: 230 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPV-------------QKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 E+W P TKLGRLV+EGKI ++++I + I+E +I+D L+ + L+ E MK + QK+T G +TR++ +VGD DGHVG+G+ S ++ A AI AKL++I V RG W G PH++P +V GK GSV V + PAP+G GIVA KK+ + AGI DV+ S G TKT N V A F+ L K Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLLPN-LEVEFMKWRIIRGKFRSKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKTKMNHVFAVFDALKK 207
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_NATPD (30S ribosomal protein S5P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps5p PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.955e-33 Identity = 78/203 (38.42%), Postives = 122/203 (60.10%), Query Frame = 2 Query: 236 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTPDFWRETR 838 W P T+LGR V +G+I S++ LP+KE +++D L+ L+DEV+ VQ+ T +G+R +F+ VV+G+ DG+VG +V AI+ AI +AKL++I P+ G W ++ G +++ + TGK GSV V + PAPRG G+ AA + VL+ AG++D +T G+T+T N KA + L TP+ R+ R Sbjct: 5 WEPRTRLGRKVADGEITSMQDALQSGLPLKEPELVDQLLPG-LEDEVLDINMVQRMTDSGRRVKFRCVVVIGNRDGYVGYAQGRDDQVGGAIQKAIDVAKLNIIDVPLGSGSWEDRPGGRNSLMRRTTGKAGSVEVELKPAPRGLGLAAAPTVRHVLELAGVEDAWTKCHGNTRTTLNLAKATYNALRNASESRTPEHTRQVR 206
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_CENSY (30S ribosomal protein S5P OS=Cenarchaeum symbiosum GN=rps5p PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.703e-33 Identity = 82/195 (42.05%), Postives = 119/195 (61.03%), Query Frame = 2 Query: 224 EEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTY 802 EE WVP T LG+ V G+I SLE+I I+E II L+ LK EV+ +QK T GQ TRFKA V G+ +G++G+G +K++ AI A A L+V P++ G W + + H+VP KV GK GSV + ++PAPRG G+VA +++L+ AG+ D +T+++GST T + KA ECL +T+ Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLLPD-LKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPTTNSTSKAVLECLRQTF 216
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_HALWD (30S ribosomal protein S5P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps5p PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.816e-32 Identity = 74/196 (37.76%), Postives = 117/196 (59.69%), Query Frame = 2 Query: 236 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLKTYGFLTP 817 W P T+LGR+V++G + S+EQ LP+KE +++D L+ L DEV+ VQ+ T +G+R +F+ V +G+ +G +G +V +AI+ AI +AKL++I V RG W + G +++ GK GSVTV ++PAP+G G+ AA +L+ AG++D +T S G+T+T N KA + L TP Sbjct: 11 WTPRTRLGRMVQDGDVTSMEQALNSGLPLKEPELVDQLLPG-LDDEVLDINMVQRMTDSGRRVKFRCVVAIGNRNGFLGYAEGRDDQVGSAIQKAIDVAKLNLISVDRGSGSWEDSAGGVNSLTRNAEGKAGSVTVEVMPAPQGLGLAAAETVSNILELAGVEDAWTRSNGNTRTTVNLAKATYNALRNASQSRTP 205
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_LACSS (30S ribosomal protein S5 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.748e-17 Identity = 57/145 (39.31%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 362 LKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 L+D V+ V K + G+R RF A V+VGD +GHVG G ++EV AIR A+ AK ++I V K+G T+P +V G+ G+ V + PA G+GI A + V++ AGIDDV + + GS KT N ++A + L + Sbjct: 11 LEDRVVSINRVTKVVKGGRRLRFAAIVIVGDKNGHVGFGTGKAQEVPEAIRKAVEDAKKNLINV------PKVGT--TLPHEVIGRFGAGRVLLKPAVEGSGIAAGGAVRAVMELAGIDDVTSKTLGS-KTAINVIRATIDGLTR 146
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_GRAFK (30S ribosomal protein S5 OS=Gramella forsetii (strain KT0803) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.836e-16 Identity = 57/150 (38.00%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 353 GHKLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSV--IPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECLLK 796 G +LKD ++ V K T+ G+ F A VVVGD +G VG G+ SKEV+ AI A+ AK ++ IP+ +G T+P + GK G V ++PA G GI+A + VL+ G+ DV + ++GS+ N VKA F+ LL+ Sbjct: 15 GLELKDRLVGVQRVTKVTKGGRAFGFSAIVVVGDENGVVGQGLGKSKEVADAISKAVEDAKKNLVRIPLHKG----------TLPHEQKGKYGGARVMLLPAAAGTGIIAGGAIRAVLESVGVHDVLSKNQGSSNP-HNVVKATFDALLQ 153
BLAST of EY659785 vs. ExPASy Swiss-Prot
Match: RS5_PEDPA (30S ribosomal protein S5 OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.704e-16 Identity = 57/144 (39.58%), Postives = 80/144 (55.56%), Query Frame = 2 Query: 359 KLKDEVMKSMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVSTAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVSKKVLQFAGIDDVFTSSRGSTKTLGNFVKANFECL 790 +++D V+ V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ A+ S+I V +G T+P + G G + M PA G+G+ A + V++ AGIDDV TS R + T N V+A FE L Sbjct: 11 EIEDRVVAINRVTKVVKGGRRLRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVETARKSLIEV------PIVGT--TLPHEAVGVYGGGRILMKPALEGSGVAAGGAVRAVMELAGIDDV-TSKRLGSNTAVNVVRATFEGL 145 The following BLAST results are available for this feature:
BLAST of EY659785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659785 ID=EY659785; Name=EY659785; organism=Citrus sinensis; type=EST; length=944bpback to top |