EY659749

Overview
NameEY659749
Unique NameEY659749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.507e-96
Identity = 176/232 (75.86%), Postives = 196/232 (84.48%), Query Frame = 1
Query:  148 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            +  E + QYY Q I + +L + QKT NL RLEAQRN LN+RVR+L+EE+QLLQEPGSYVGEV+K MGKNKVLVKVHPEGKYVV            P+ RVALRNDSY L  ILP+KVDPLV+LM VEK+PDSTY+M+GGL++QIKEIKEVIELP+KHPELFESLGI QPKG+LLYGPPGTGKTLLARAVAHHTDC FIRVSGSELVQKYIGEGSRM RELF M REHAPSII
Sbjct:   11 QSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSII 242          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.507e-96
Identity = 178/233 (76.39%), Postives = 199/233 (85.41%), Query Frame = 1
Query:  145 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            S +GEG R YY+  I ELQL V +K+ NL RL+AQRNELN++VRML+EELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VV             + RVALRN+SY LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRM RELF M REHAPSII
Sbjct:   10 STKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSII 242          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.969e-96
Identity = 176/240 (73.33%), Postives = 197/240 (82.08%), Query Frame = 1
Query:  124 VCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            V  A  +S    GL+ YY+  I E ++ +R K  NL RL+AQRNELN RVR LKEELQ LQEPGS+VGEVVKVMGK KVL+K+  EGKY+V            P  RVALRNDSY LH ILP+K+DPLV+LMKVEKVPD+TY+M+GGLD+QIKEIKEVIELPIKHPELFESLGIAQPKGV++YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS+M RELF M REHAPSII
Sbjct:   14 VVLASSSSASVNGLKNYYIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVKVMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSII 253          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 333.569 bits (854), Expect = 9.463e-91
Identity = 164/228 (71.93%), Postives = 189/228 (82.89%), Query Frame = 1
Query:  160 GLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            G++ Y+ Q I E +L++R KT N+ RLEAQRN LN +VR +K+EL+LLQEPGSYVGEV+K++   KVLVKV PEGKY+V             S RV LR+DSY+LH +L +K DPLV+LM VEKVPDSTYDM+GGL +QIKEIKEVIELP+KHPELFESLGIAQPKGV+LYGPPGTGKTLLARAVAHHTDC FIRVSG+ELVQKYIGEGSRM RELF M REHAPSII
Sbjct:   18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSII 245          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.604e-82
Identity = 157/233 (67.38%), Postives = 183/233 (78.54%), Query Frame = 1
Query:  148 KQGEGL-RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            +  EG  + +Y   +  L++Q+ +KT  L  LE +R ELN RVR L+EE+ ++QEP S VG VV+ MGK +VLVK +P+GKY+V               RVALR+DSY +H ILP+KVDPLV+LM VEKVPDSTY MIGGLD+QIKEI+EVIELPIKHPELFE+LGIAQPKGVLLYGPPGTGKTLLARAVAHHT C FIRVSGSELVQKYIGEGSR+ RELF M REHAPSII
Sbjct:   61 RMAEGFCKNFYSNKLDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSNVGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSII 293          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.528e-48
Identity = 108/242 (44.63%), Postives = 152/242 (62.81%), Query Frame = 1
Query:  148 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRM-------LKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            K+ E L +    H  +L+++ R++      LE +R+E   L   +R        L+ +LQ +++P   VG V +++   +V+VK     K+V             P   VAL   S  +  +LPS+ D  V  M+V++ PD +YD IGGLD+QI+EI+EV+E P+K PELFE +G+  PKGVLLYGPPGTGKTLLA+AVA+H D TFIR++  ELVQK+IGEG+R+ RELF + RE APSII
Sbjct:   35 KRLEELERKLRAHEEKLRIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSII 276          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.996e-48
Identity = 101/224 (45.09%), Postives = 146/224 (65.18%), Query Frame = 1
Query:  172 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            Y  + I +L+LQVR        LEA +  L   +  L+ E+  L++P ++ G V++V+  ++ +V+ +   ++VV            P TRVAL   +  +  ILP+  DP V   +V + P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI  PKGVLLYGPPG GKTL+A+A+AH  + TFIRV GSELV+KYIGEG+R+  ELF + +E AP+II
Sbjct:   18 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTII 234          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.447e-48
Identity = 101/224 (45.09%), Postives = 147/224 (65.62%), Query Frame = 1
Query:  172 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            Y  + I +L+LQVR        LEA +  L   +  L+ E+  L++P ++ G V++V+ +++ +V+ +   ++VV            P TRVAL   +  +  ILP+  DP V   +V + P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI  PKGVLLYGPPG GKTL+A+A+AH  + TFIRV GSELV+KYIGEG+R+  ELF + +E AP+II
Sbjct:   21 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTII 237          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.447e-48
Identity = 103/237 (43.46%), Postives = 145/237 (61.18%), Query Frame = 1
Query:  154 GEGLRQYYLQHIH-------ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            GE + QY L+ I        EL+ Q RQ       +E Q+      +R LK E++ L+ P   +G V  V+  ++V+V+     +++V            P  R  L   S  +  +LP+  D  +  M++ + P+ TY+ IGGL+ QI+EI+E +ELP+  P+LFE +GI+ PKGVLLYGPPGTGKTLLARAVAH T+  F+RV GSELVQKYIGEG+R+ RELF + ++ APSII
Sbjct:   14 GEDIYQYLLERITNLENRNLELREQFRQMESEKRYVETQKIRYERELRKLKSEIEQLRSPPLVIGTVTDVIDNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSII 250          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.690e-47
Identity = 100/224 (44.64%), Postives = 145/224 (64.73%), Query Frame = 1
Query:  172 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            Y  + I +L+LQVR        LEA +  L   +  L+ E+  L++P ++ G V++V+  ++ +V+ +   ++VV            P  RVAL   +  +  +LPS  DP V   +V + P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI  PKGVLLYGPPG GKTL+A+A+AH  + TFIRV GSELV+KYIGEG+R+  ELF + +E AP+II
Sbjct:   21 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTII 237          
The following BLAST results are available for this feature:
BLAST of EY659749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
PRS8_SCHPO1.507e-9675.8626S protease regulatory subunit 8 homolog OS=Schiz... [more]
PRS8_MANSE1.507e-9676.3926S protease regulatory subunit 8 OS=Manduca sexta... [more]
PRS8_NAEFO1.969e-9673.3326S protease regulatory subunit 8 homolog OS=Naegl... [more]
PRS8_YEAST9.463e-9171.9326S protease regulatory subunit 8 homolog OS=Sacch... [more]
PRS8_ENCCU3.604e-8267.3826S protease regulatory subunit 8 homolog OS=Encep... [more]
PSMR_METKA1.528e-4844.63Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PSMR_PYRFU1.996e-4845.09Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PSMR_PYRHO4.447e-4845.09Proteasome-activating nucleotidase OS=Pyrococcus h... [more]
PSMR_METMJ4.447e-4843.46Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR_PYRAB1.690e-4744.64Proteasome-activating nucleotidase OS=Pyrococcus a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659749 ID=EY659749; Name=EY659749; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGAGACTTGATCCGAAAGACAATTAGATTCGAACAAATCGA
ACTCGTTCACTCGGAAAGAATGGCCGCTGTAGGAATCGAAACGAAGCAGC
CGGAATCGGCGGCGCCAGAGGAGGTGTGTGCGGCGAAAGGAGCATCGAAA
CAAGGAGAGGGATTGAGGCAATACTACCTCCAACACATTCACGAACTCCA
GCTCCAAGTCCGTCAAAAAACCCACAATCTCAATCGCCTCGAAGCCCAGC
GTAACGAACTCAATTCTAGAGTGCGGATGCTTAAAGAAGAATTACAGCTT
CTTCAAGAGCCTGGATCCTATGTCGGTGAAGTTGTTAAAGTTATGGGAAA
AAATAAGGTTCTTGTTAAGGTTCATCCTGAGGGGAAATATGTTGTTGATA
TTGATAAAAGTATTGATATAACCAAGATCACTCCGTCAACAAGAGTTGCA
CTTCGTAATGACAGCTATGTTCTTCATTTGATCCTGCCAAGCAAAGTAGA
TCCCCTGGTCAACCTTATGAAGGTTGAAAAGGTCCCTGATTCTACATATG
ACATGATTGGTGGCCTTGATCAGCAAATTAAGGAGATCAAGGAGGTCATT
GAGCTTCCTATCAAACATCCCGAATTGTTCGAGTCTCTTGGAATAGCTCA
ACCCAAGGGTGTATTGCTATATGGACCACCTGGTACTGGCAAAACACTGT
TGGCTAGAGCTGTGGCTCATCATACTGATTGTACTTTCATCAGGGTTTCT
GGTTCTGAATTAGTCCAGAAATACATTGGAGAAGGCTCCAGAATGGGTAG
AGAACTTTTTTGTATGGGCAGGGAACATGCTCCGTCTATCATTTTATGGA
TGAAATGACAGTATCGGATCTGCCCGAATGGATCTGGCAGCGAA
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