EY659749

Overview
NameEY659749
Unique NameEY659749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.883e-47
Identity = 94/216 (43.52%), Postives = 142/216 (65.74%), Query Frame = 1
Query:  196 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            L  ++R+   +   +E +R  L+  V+ L+ E++  + P   +  V +V+  ++V VK      +V+            P  RVAL   ++ +  +LPS+ DP+V  M+VE+ PD +Y+ IGGL++Q++E+KE +ELP+K PELFE +GI  PKGVLLYGPPGTGKTLLA+AVAH T+ TFI++  SE V+KYIGEG+R+ R +F + +E +PSII
Sbjct:   33 LMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSII 248          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.765e-47
Identity = 97/223 (43.50%), Postives = 146/223 (65.47%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            Y  +I  L+ ++RQ    +  LEA +  L   +  L+ E+  L++P ++ G V++V+  ++ +V+ +   ++VV            P +RVAL   +  +  +LP++ DP V   +V + P  TY  IGGL++Q+ E++E +ELP+KHPELFE +GI  PKGVLLYGPPG GKTL+A+AVA+H + TFIRV GSELV+K+IGEG+R+  ELF M +E AP+II
Sbjct:   13 YEDYITFLKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTII 235          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.765e-47
Identity = 97/223 (43.50%), Postives = 146/223 (65.47%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            Y  ++  L+ ++RQ    +  LEA +  L   +  L+ E+  L++P ++ G V++V+   + +V+ +   ++VV            P  RVAL   +  +  +LPS+ DP V   +V + P  TY+ IGGL++Q++E++E IELP+KHPELFE +GI  PKGVLLYGPPG GKTL+A+AVA+H + TFIRV GSELV+K+IGEG+R+  ELF + +E AP+II
Sbjct:   13 YDDYVTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTII 235          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.387e-47
Identity = 101/239 (42.26%), Postives = 146/239 (61.09%), Query Frame = 1
Query:  148 KQGEGLRQYYLQHIH-------ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            ++GE L +Y L+ +        EL+ Q+RQ   +   LE Q+      VR  K E++ ++ P   +G V  ++ +N+V+V+     +++V            P  R  L   S  +  ILP+  D  +  M+V + P   Y+ IGGL++QI EI+E +ELP+K PE+F  +GI  PKGVLL+GPPGTGKTLLARAVAH T+  F+RV GSELVQKYIGEG+R+ RELF + ++ +PSII
Sbjct:   12 QKGEDLYRYLLERVTNLEDRNTELREQLRQIEADKRYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSII 250          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.387e-47
Identity = 105/237 (44.30%), Postives = 145/237 (61.18%), Query Frame = 1
Query:  154 GEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            G+   QY L+ + +L+    +      RLE ++  + S        VR L+ E++ L+ P   VG V  ++   +V+VK     K+VV            P  RVAL   +  +  +LP+  DP+V   +VE+ P+ +Y+ IGGLD QI+EI+E +ELP+  PELF  +GI  PKGVLLYGPPGTGKTLLA+AVA+ T  TFIRV GSE VQKYIGEG+R+ RE+F + +E APSII
Sbjct:    2 GDSEIQYLLEKLKKLEEDYYKLRELYRRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSII 238          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.431e-46
Identity = 98/233 (42.06%), Postives = 151/233 (64.81%), Query Frame = 1
Query:  145 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            S++ +    Y  + I +L+LQVR        LEA +  L   +  L+ E+  L++P ++ G +++++ +++ +V+ +   ++VV            P  RVAL   +  +  +LPS+ DP V   +V + P  +Y+ IGGLD+Q++E++E IELP+KHPELFE +GI  PKGVLLYGPPG GKTL+A+A+AH  + TFIRV GSELV+K+IGEG+R+  ELF + +E AP+II
Sbjct:   11 SEEYDDYIMYLKKRIRQLELQVRT-------LEADKERLERELSRLRMEMSRLRQPPAFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAII 236          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.162e-46
Identity = 99/217 (45.62%), Postives = 133/217 (61.29%), Query Frame = 1
Query:  193 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            EL+ Q+RQ   +   +E Q+      VR LK E + L+ P   +G VV V+  N+V+V+     +++V            P  R  L   S  +  +LPS  D  V  M++   P   Y  IGGL +QI E++E +ELP+K PELF  +GI  PKGVLLYGPPGTGKTLLA+AVAH T+  F+RV GSELVQKYIGEG+R+ RELF + ++ AP+II
Sbjct:   59 ELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTII 275          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.273e-46
Identity = 100/232 (43.10%), Postives = 140/232 (60.34%), Query Frame = 1
Query:  169 QYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            +Y L  + +L+ +  +      ++E ++  + ++       +R L  EL  L+ P   VG ++ VM   K+++K     K+VV            P  +VAL   S  +  +LP+  DP V  M+V   P+  Y  IGGL+ QI E+KE +ELP+  PELF+ +GI  PKGVLLYGPPGTGKTLLA+AVA+ T  TFIR+ GSELVQKYIGEG+RM RELF + +E +PSII
Sbjct:   25 KYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSII 256          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.025e-44
Identity = 100/226 (44.25%), Postives = 133/226 (58.85%), Query Frame = 1
Query:  166 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            R   LQ   +  L+ ++    L  L  Q  EL  +    + +L+ LQ  G  VGEV+K + + K +VK     +YVV            P TRVAL   +  +   LP +VDPLV  M  E   + +Y  IGGL +QI+E++EVIELP+ +PELF+ +GI  PKG LLYGPPGTGKTLLARAVA   DC F++V  S +V KYIGE +R+ RE+F   R+H P II
Sbjct:    5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCII 230          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.025e-44
Identity = 100/226 (44.25%), Postives = 133/226 (58.85%), Query Frame = 1
Query:  166 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            R   LQ   +  L+ ++    L  L  Q  EL  +    + +L+ LQ  G  VGEV+K + + K +VK     +YVV            P TRVAL   +  +   LP +VDPLV  M  E   + +Y  IGGL +QI+E++EVIELP+ +PELF+ +GI  PKG LLYGPPGTGKTLLARAVA   DC F++V  S +V KYIGE +R+ RE+F   R+H P II
Sbjct:    5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCII 230          
The following BLAST results are available for this feature:
BLAST of EY659749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
PSMR_METTH2.883e-4743.52Proteasome-activating nucleotidase OS=Methanobacte... [more]
PSMR_THEGJ3.765e-4743.50Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_PYRKO3.765e-4743.50Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PSMR_METPE8.387e-4742.26Proteasome-activating nucleotidase OS=Methanosphae... [more]
PSMR_ARCFU8.387e-4744.30Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
PSMR_THEON1.431e-4642.06Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_METB64.162e-4645.62Proteasome-activating nucleotidase OS=Methanoregul... [more]
PSMR_UNCMA9.273e-4643.10Proteasome-activating nucleotidase OS=Uncultured m... [more]
PRS10_SPETR1.025e-4444.2526S protease regulatory subunit S10B OS=Spermophil... [more]
PRS10_MOUSE1.025e-4444.2526S protease regulatory subunit S10B OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659749 ID=EY659749; Name=EY659749; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGAGACTTGATCCGAAAGACAATTAGATTCGAACAAATCGA
ACTCGTTCACTCGGAAAGAATGGCCGCTGTAGGAATCGAAACGAAGCAGC
CGGAATCGGCGGCGCCAGAGGAGGTGTGTGCGGCGAAAGGAGCATCGAAA
CAAGGAGAGGGATTGAGGCAATACTACCTCCAACACATTCACGAACTCCA
GCTCCAAGTCCGTCAAAAAACCCACAATCTCAATCGCCTCGAAGCCCAGC
GTAACGAACTCAATTCTAGAGTGCGGATGCTTAAAGAAGAATTACAGCTT
CTTCAAGAGCCTGGATCCTATGTCGGTGAAGTTGTTAAAGTTATGGGAAA
AAATAAGGTTCTTGTTAAGGTTCATCCTGAGGGGAAATATGTTGTTGATA
TTGATAAAAGTATTGATATAACCAAGATCACTCCGTCAACAAGAGTTGCA
CTTCGTAATGACAGCTATGTTCTTCATTTGATCCTGCCAAGCAAAGTAGA
TCCCCTGGTCAACCTTATGAAGGTTGAAAAGGTCCCTGATTCTACATATG
ACATGATTGGTGGCCTTGATCAGCAAATTAAGGAGATCAAGGAGGTCATT
GAGCTTCCTATCAAACATCCCGAATTGTTCGAGTCTCTTGGAATAGCTCA
ACCCAAGGGTGTATTGCTATATGGACCACCTGGTACTGGCAAAACACTGT
TGGCTAGAGCTGTGGCTCATCATACTGATTGTACTTTCATCAGGGTTTCT
GGTTCTGAATTAGTCCAGAAATACATTGGAGAAGGCTCCAGAATGGGTAG
AGAACTTTTTTGTATGGGCAGGGAACATGCTCCGTCTATCATTTTATGGA
TGAAATGACAGTATCGGATCTGCCCGAATGGATCTGGCAGCGAA
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