EY659749

Overview
NameEY659749
Unique NameEY659749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.173e-40
Identity = 90/217 (41.47%), Postives = 127/217 (58.53%), Query Frame = 1
Query:  193 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            E+QL VR     +  L+ +   L   +   K E++ +  P      V+ V+   +VLV+       VV            P   VAL      +  +LP K DP+V  M++ + P+ TY  IGGL++QIKE++EV+ELP+K PE+F  +G+  PKGVLLYGPPGTGKT+LA+AVA  ++  FI V  SE  QK++GEG+R+ RELF M +  APSII
Sbjct:   16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSII 231          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.173e-40
Identity = 96/234 (41.03%), Postives = 135/234 (57.69%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FIRV GSELVQKY+GEG+RM RELF M R     +I +
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFF 274          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5)

HSP 1 Score: 167.162 bits (422), Expect = 1.173e-40
Identity = 96/234 (41.03%), Postives = 135/234 (57.69%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FIRV GSELVQKY+GEG+RM RELF M R     +I +
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFF 274          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 1.173e-40
Identity = 96/234 (41.03%), Postives = 135/234 (57.69%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FIRV GSELVQKY+GEG+RM RELF M R     +I +
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFF 274          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 1.173e-40
Identity = 96/234 (41.03%), Postives = 135/234 (57.69%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FIRV GSELVQKY+GEG+RM RELF M R     +I +
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFF 274          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 167.162 bits (422), Expect = 1.173e-40
Identity = 96/234 (41.03%), Postives = 135/234 (57.69%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FIRV GSELVQKY+GEG+RM RELF M R     +I +
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFF 274          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.532e-40
Identity = 95/202 (47.03%), Postives = 123/202 (60.89%), Query Frame = 1
Query:  256 ELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            +L S  +M++EE  LL      V    +++  N    K +V +   GKYVV               RV +    Y + + LP K+DP V +M VE+ PD+TY  IGG  +QI++I+EV+ELP+ HPE F  LGI  PKGVL YGPPG+GKTL+ARAVA+ T   FIRV GSELVQKYIGEG+RM RELF M R     I+ +
Sbjct:  109 DLVSDKQMMQEEQPLL------VATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFF 304          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.532e-40
Identity = 93/229 (40.61%), Postives = 132/229 (57.64%), Query Frame = 1
Query:  157 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            E  + Y LQH        R+    L  L     +L  +    +++++ LQ  G  +GEV+K +   + +VK     +YVV               RV+L   +  +  ILP +VDPLV  M +E   D ++  +GGL++QI+E++EVIELP+K+PELF  +GI  PKGVLLYGPPGTGKTLLARAVA      F++V  S +V KYIGE +R+ RE+F   +EH P +I
Sbjct:    9 EKYKSYLLQH--------REWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVI 229          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.001e-40
Identity = 93/234 (39.74%), Postives = 136/234 (58.12%), Query Frame = 1
Query:  142 ASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            A ++   +  Y  + +H  +L+ R +T   N L A + E N      +++L+ LQ  G  +GEV++ +   +++VK     +YVV              TRV L   +  +   LP +VDP+V  M  E   + +Y  +GGL  QI+E++E IELP+ +PELF  +GI  PKGVLLYGPPGTGKTLLARA+A + D  F++V  S ++ KYIGE +R+ RE+F   REH P II
Sbjct:    8 ARRRTAAVTDYRKKLLHHKELESRVRTAREN-LRAAKKEFNKT----EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCII 236          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 2.001e-40
Identity = 96/234 (41.03%), Postives = 135/234 (57.69%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FIRV GSELVQKY+GEG+RM RELF M R     +I +
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFF 274          
The following BLAST results are available for this feature:
BLAST of EY659749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
PSMR_SULIA1.173e-4041.47Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PRS7_XENLA1.173e-4041.0326S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7_MOUSE1.173e-4041.0326S protease regulatory subunit 7 OS=Mus musculus ... [more]
PRS7_MACFA1.173e-4041.0326S protease regulatory subunit 7 OS=Macaca fascic... [more]
PRS7_HUMAN1.173e-4041.0326S protease regulatory subunit 7 OS=Homo sapiens ... [more]
PRS7_BOVIN1.173e-4041.0326S protease regulatory subunit 7 OS=Bos taurus GN... [more]
PRS7B_ARATH1.532e-4047.0326S protease regulatory subunit 7 homolog B OS=Ara... [more]
PRS10_SCHPO1.532e-4040.61Probable 26S protease subunit rpt4 OS=Schizosaccha... [more]
PS10B_ARATH2.001e-4039.7426S protease regulatory subunit S10B homolog B OS=... [more]
PRS7_PONAB2.001e-4041.0326S protease regulatory subunit 7 OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659749 ID=EY659749; Name=EY659749; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGAGACTTGATCCGAAAGACAATTAGATTCGAACAAATCGA
ACTCGTTCACTCGGAAAGAATGGCCGCTGTAGGAATCGAAACGAAGCAGC
CGGAATCGGCGGCGCCAGAGGAGGTGTGTGCGGCGAAAGGAGCATCGAAA
CAAGGAGAGGGATTGAGGCAATACTACCTCCAACACATTCACGAACTCCA
GCTCCAAGTCCGTCAAAAAACCCACAATCTCAATCGCCTCGAAGCCCAGC
GTAACGAACTCAATTCTAGAGTGCGGATGCTTAAAGAAGAATTACAGCTT
CTTCAAGAGCCTGGATCCTATGTCGGTGAAGTTGTTAAAGTTATGGGAAA
AAATAAGGTTCTTGTTAAGGTTCATCCTGAGGGGAAATATGTTGTTGATA
TTGATAAAAGTATTGATATAACCAAGATCACTCCGTCAACAAGAGTTGCA
CTTCGTAATGACAGCTATGTTCTTCATTTGATCCTGCCAAGCAAAGTAGA
TCCCCTGGTCAACCTTATGAAGGTTGAAAAGGTCCCTGATTCTACATATG
ACATGATTGGTGGCCTTGATCAGCAAATTAAGGAGATCAAGGAGGTCATT
GAGCTTCCTATCAAACATCCCGAATTGTTCGAGTCTCTTGGAATAGCTCA
ACCCAAGGGTGTATTGCTATATGGACCACCTGGTACTGGCAAAACACTGT
TGGCTAGAGCTGTGGCTCATCATACTGATTGTACTTTCATCAGGGTTTCT
GGTTCTGAATTAGTCCAGAAATACATTGGAGAAGGCTCCAGAATGGGTAG
AGAACTTTTTTGTATGGGCAGGGAACATGCTCCGTCTATCATTTTATGGA
TGAAATGACAGTATCGGATCTGCCCGAATGGATCTGGCAGCGAA
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