EY659749

Overview
NameEY659749
Unique NameEY659749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.001e-40
Identity = 91/227 (40.09%), Postives = 140/227 (61.67%), Query Frame = 1
Query:  163 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            L+Q  L+ I +  L  ++   N +  + + +E NS+ +  ++ ++ L+     VG + +++  N  +V      ++ V                V L N +  +  ++  +VDP+VN+MKVEK P  +Y  IGGL+ Q++E+KE IELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QKY+G+G ++ RELF +  E APSI+
Sbjct:   56 LKQLKLERIKDYLLMEQEFLQNYDLNQPKVDE-NSKEQADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIV 281          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.413e-40
Identity = 89/217 (41.01%), Postives = 128/217 (58.99%), Query Frame = 1
Query:  193 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            E+QL VR     +  L+ +   L   +   K E++ +  P      V+ V+   +VLV+       VV            P   VAL      +  +LP K DP+V  M++ + P+ TY  IGGL++QI+E++EV+ELP+K+PE+F  +G+  PKGVLLYGPPGTGKT+LA+AVA  ++  FI V  SE  QK++GEG+R+ RELF M +  APSII
Sbjct:   16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSII 231          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.413e-40
Identity = 88/224 (39.29%), Postives = 132/224 (58.93%), Query Frame = 1
Query:  193 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            +L  +++     L  +E Q   +   ++ L+       EE++ +Q     +G+ ++++ +N  +V       Y V            PS  V L   S  L  +LP + D  ++L+   + PD TY+ IGG D Q +EI+E +ELP+ H EL++ +GI  P+GVLLYGPPGTGKT+LA+AVAHHT   FIRV GSE VQKY+GEG RM R++F + +E+AP+II
Sbjct:   34 DLYARLKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 257          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.822e-40
Identity = 93/226 (41.15%), Postives = 133/226 (58.85%), Query Frame = 1
Query:  166 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            R+  LQH  EL+ +VR    NL   + + N+        +++L+ LQ  G  +GEV++ +   +++VK     +YVV              TRV L   +  +   LP +VDP+V  M  E   + +Y  +GGL  QI+E++E IELP+ +PELF  +GI  PKGVLLYGPPGTGKTLLARA+A + D  F++V  S ++ KYIGE +R+ RE+F   REH P II
Sbjct:   19 RKKLLQH-KELESRVRTARENLRGAKKEFNKT-------EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCII 236          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.822e-40
Identity = 97/250 (38.80%), Postives = 141/250 (56.40%), Query Frame = 1
Query:   94 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            K PE+AA           K    LR   L+ I +  L   +   N  RL+ Q  +        + ++  L+     VG + +++ +N  +V      +Y V            P   + + N    +  IL  +VDP+V++MKVEK P  +Y  IGGL+ QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QKY+G+G ++ RELF +  + +PSI+
Sbjct:   44 KGPEAAARLPTVTPSTKCK----LRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEED----RSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIV 285          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.822e-40
Identity = 97/250 (38.80%), Postives = 141/250 (56.40%), Query Frame = 1
Query:   94 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            K PE+AA           K    LR   L+ I +  L   +   N  RL+ Q  +        + ++  L+     VG + +++ +N  +V      +Y V            P   + + N    +  IL  +VDP+V++MKVEK P  +Y  IGGL+ QI+EIKE +ELP+ HPEL+E +GI  PKGV+LYG PGTGKTLLA+AVA+ T  TF+RV GSEL+QKY+G+G ++ RELF +  + +PSI+
Sbjct:   44 KGPEAAARLPTVTPSTKCK----LRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEED----RSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIV 285          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 7.603e-40
Identity = 95/234 (40.60%), Postives = 134/234 (57.26%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            Y + I +++  ++Q    +N L    E+        +  L  + Q LQ E    V    K++  +    K ++ V    K+VV               RV +  + Y +H+ LP K+DP V +M+VE+ PD TY  +GG  +QI++++EV+E P+ HPE F +LGI  PKGVLL+GPPGTGKTL ARAVA+ TD  FI V GSELVQKY+GEG+RM RELF M R     +I +
Sbjct:   41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFF 274          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 9.930e-40
Identity = 84/167 (50.30%), Postives = 107/167 (64.07%), Query Frame = 1
Query:  349 KNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            KN  ++ +    K+VV               RV    + Y + L LP K+DP V +M+VE+ PD TY  +GG  +QI+ ++EV+ELP+  PE F  LGI  PKG++LYGPPGTGKTL ARAVA+ TD TFIRV GSELVQKY+GEG+RM RELF M R     II +
Sbjct:  112 KNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFF 278          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.694e-39
Identity = 93/234 (39.74%), Postives = 136/234 (58.12%), Query Frame = 1
Query:  175 YLQHIHELQLQVRQKTHNLNRLEAQRNELN-----SRVRMLKEELQLLQEPGSYVGEVVKVM--GKN--KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSIILW 849
            Y + I  L+  +++ T  +N L   +         S+  ++ ++    +EP   V    K++  GK   K ++ V    K+VV               RV +  + Y + + LP K+D  V +M+VE+ PD TY  +GG  +QI++++EV+E+P+ HPE F +LGI  PKGVL+YGPPGTGKTL ARAVA+ TD  F+RV GSELVQKY+GEG+RM R+LF M R     II +
Sbjct:   36 YSKSIRILEEDIKKMTSKVNELCGIKESDTGIGPPSQWDLVVDKTSAHEEPPLQVARCTKIIDVGKPNAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFF 269          
BLAST of EY659749 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.212e-39
Identity = 87/224 (38.84%), Postives = 129/224 (57.59%), Query Frame = 1
Query:  193 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMGRELFCMGREHAPSII 843
            +L  + ++    L  LE Q   +    R LK       EE++ +Q     +G+ ++ + +N  +V       Y V            PS  VAL   S  L  +LP + D  +++++ ++ PD  Y  IGG+D Q +EI+E +ELP+ H EL+  +GI  P+GVL+YGPPG GKT+LA AVAHHT   FIRV GSE VQKY+GEG RM R++F + +E++P+II
Sbjct:   36 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAII 259          
The following BLAST results are available for this feature:
BLAST of EY659749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 363
Match NameE-valueIdentityDescription
PRS4_DICDI2.001e-4040.0926S protease regulatory subunit 4 homolog OS=Dicty... [more]
PSMR_SULSO3.413e-4041.01Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PRS6B_SOLTU3.413e-4039.2926S protease regulatory subunit 6B homolog OS=Sola... [more]
PS10A_ARATH5.822e-4041.1526S protease regulatory subunit 10B homolog A OS=A... [more]
PRS4B_ARATH5.822e-4038.8026S proteasome regulatory subunit 4 homolog B OS=A... [more]
PRS4A_ARATH5.822e-4038.8026S proteasome regulatory subunit 4 homolog A OS=A... [more]
PRS7_RAT7.603e-4040.6026S protease regulatory subunit 7 OS=Rattus norveg... [more]
PRS7_SCHPO9.930e-4050.3026S protease regulatory subunit 7 homolog OS=Schiz... [more]
PRS7_DICDI1.694e-3939.7426S protease regulatory subunit 7 OS=Dictyostelium... [more]
PRS6B_MANSE2.212e-3938.8426S protease regulatory subunit 6B OS=Manduca sext... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659749 ID=EY659749; Name=EY659749; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGAGACTTGATCCGAAAGACAATTAGATTCGAACAAATCGA
ACTCGTTCACTCGGAAAGAATGGCCGCTGTAGGAATCGAAACGAAGCAGC
CGGAATCGGCGGCGCCAGAGGAGGTGTGTGCGGCGAAAGGAGCATCGAAA
CAAGGAGAGGGATTGAGGCAATACTACCTCCAACACATTCACGAACTCCA
GCTCCAAGTCCGTCAAAAAACCCACAATCTCAATCGCCTCGAAGCCCAGC
GTAACGAACTCAATTCTAGAGTGCGGATGCTTAAAGAAGAATTACAGCTT
CTTCAAGAGCCTGGATCCTATGTCGGTGAAGTTGTTAAAGTTATGGGAAA
AAATAAGGTTCTTGTTAAGGTTCATCCTGAGGGGAAATATGTTGTTGATA
TTGATAAAAGTATTGATATAACCAAGATCACTCCGTCAACAAGAGTTGCA
CTTCGTAATGACAGCTATGTTCTTCATTTGATCCTGCCAAGCAAAGTAGA
TCCCCTGGTCAACCTTATGAAGGTTGAAAAGGTCCCTGATTCTACATATG
ACATGATTGGTGGCCTTGATCAGCAAATTAAGGAGATCAAGGAGGTCATT
GAGCTTCCTATCAAACATCCCGAATTGTTCGAGTCTCTTGGAATAGCTCA
ACCCAAGGGTGTATTGCTATATGGACCACCTGGTACTGGCAAAACACTGT
TGGCTAGAGCTGTGGCTCATCATACTGATTGTACTTTCATCAGGGTTTCT
GGTTCTGAATTAGTCCAGAAATACATTGGAGAAGGCTCCAGAATGGGTAG
AGAACTTTTTTGTATGGGCAGGGAACATGCTCCGTCTATCATTTTATGGA
TGAAATGACAGTATCGGATCTGCCCGAATGGATCTGGCAGCGAA
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