EY659743

Overview
NameEY659743
Unique NameEY659743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659743_ssr228 microsatellite EY659743_ssr228:228..239. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7604 contig Csv1_Contig7604:59..981. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 8.954e-52
Identity = 106/219 (48.40%), Postives = 141/219 (64.38%), Query Frame = 3
Query:  171 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFMLITETLILRAAQV---LDQQLCL-EPRYWW 809
            A F E ++ +W+  H   +  G   +L LD  SG GF S+ +YLFG+VS++IKLV GDSAGTVTAFYM+S+  N  +E DFEFLGN TG+PY VQTNIY NG G+REQR+NLWFDP  ++H Y+ILW+   +VF VD+ PIRV KN      PF     MGVYS++W ADDW  +GGL K   +   F+   +   + A ++    D   C  + ++WW
Sbjct:   27 AKFDELYRSSWAMDHC--VNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTTDLSKCNGDQKFWW 242          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.954e-52
Identity = 92/179 (51.40%), Postives = 127/179 (70.95%), Query Frame = 3
Query:  174 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            +F ++F +TW +     +E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P    M +YS+LWEADDW  +GG  K
Sbjct:   25 SFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVK 202          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 4.826e-51
Identity = 93/180 (51.67%), Postives = 121/180 (67.22%), Query Frame = 3
Query:  171 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            A F  D ++TW D   +    G  + L LD+ SG GF SK +YLFG++ M+IKLV G+SAGTVTA+Y+ S   +  DE+DFEFLGN +G PYT+ TN++  GKGDREQ+  LWFDP +D+H Y+ILWN   I+F VD  PIR +KN  S    FP    M +YS+LW A++W  RGGL K
Sbjct:   24 ANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKS-PGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVK 202          

HSP 2 Score: 27.7202 bits (60), Expect = 4.826e-51
Identity = 22/56 (39.29%), Postives = 28/56 (50.00%), Query Frame = 2
Query:  707 DGSKAPFYAYYRDFDIEGC-PSSGPATVPRT--QVLVGSK*LSSLTAMKQKN-RWV 862
            D SKAPF A YR F+ E C   +G ++ P    Q   GS     L +  Q+  RWV
Sbjct:  204 DWSKAPFTASYRGFNEEACVVINGQSSCPNVSGQGSTGSWLSQELDSTGQEQMRWV 259          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.828e-51
Identity = 88/180 (48.89%), Postives = 123/180 (68.33%), Query Frame = 3
Query:  174 TFLEDFKVTWSDAHLRQIEG-GRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            +F +D K+ W D   +  +  G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP A++H Y I WN   I+F VD +PIR + N  S   PFP K  M +Y++LWEA+ W  RGGLEK
Sbjct:   23 SFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEK 201          

HSP 2 Score: 35.039 bits (79), Expect = 4.828e-51
Identity = 13/19 (68.42%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  707 DGSKAPFYAYYRDFDIEGC 763
            D SKAPF AYYR++++EGC
Sbjct:  203 DWSKAPFTAYYRNYNVEGC 221          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.580e-51
Identity = 94/178 (52.81%), Postives = 123/178 (69.10%), Query Frame = 3
Query:  177 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            F +DF VTWS  H+     GR+  L LDQ SG  F+S + +LFG++ MKIKL+ G S GTV A+YM+S+  N RDE+DFEFLGN  GQPY +QTN+YA G  +RE+R++LWFDPA D+H Y+ILWN H IVF VD +PIR+Y+N G     +P    M V ++LW  + W  RGG +K
Sbjct:   37 FNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPN-RDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDK 213          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 8.201e-51
Identity = 87/180 (48.33%), Postives = 123/180 (68.33%), Query Frame = 3
Query:  174 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            +F +D ++ W D   + +   G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  ++H Y I WN   I+F VD +PIR +KNS     PFP K  M +Y++LWEA+ W  RGGLEK
Sbjct:   28 SFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEK 206          

HSP 2 Score: 33.8834 bits (76), Expect = 8.201e-51
Identity = 14/29 (48.28%), Postives = 23/29 (79.31%), Query Frame = 2
Query:  707 DGSKAPFYAYYRDFDIEGCP-SSGPATVP 790
            D SKAPF A+YR++++EGC  ++G ++ P
Sbjct:  208 DWSKAPFTAFYRNYNVEGCVWANGKSSCP 236          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.880e-50
Identity = 96/178 (53.93%), Postives = 118/178 (66.29%), Query Frame = 3
Query:  177 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            F +D  +TW D     +  G  + L LDQ+SG GF SK +YL+G+V M+IKLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PY V TN+Y  GKGDREQ+  LWFDP A +H Y+ILWN  HIVFY+D  PIR +KN       +P    M +Y +LW ADDW  RGGL K
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTW-DEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVK 204          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.513e-49
Identity = 86/180 (47.78%), Postives = 123/180 (68.33%), Query Frame = 3
Query:  174 TFLEDFKVTWSDAHLRQIEG-GRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            +F +D ++ W D   + ++  G  + L LD+ SG GF S +++L+G+V +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  D+H Y I+WN   ++F +D +PIR +KNS     PFP    M +Y++LWEA+ W  RGGLEK
Sbjct:   28 SFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEK 206          

HSP 2 Score: 30.0314 bits (66), Expect = 1.513e-49
Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  707 DGSKAPFYAYYRDFDIEGC 763
            D SKAPF A+YR+++++ C
Sbjct:  208 DWSKAPFTAFYRNYNVDAC 226          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.368e-49
Identity = 85/180 (47.22%), Postives = 121/180 (67.22%), Query Frame = 3
Query:  174 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            +F +D ++ W D   +     G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  ++H Y I WN   I+F VD +PIR +KN      PFP +  M +Y++LWEA+ W  RGGLEK
Sbjct:   28 SFHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEK 206          

HSP 2 Score: 32.3426 bits (72), Expect = 4.368e-49
Identity = 11/19 (57.89%), Postives = 17/19 (89.47%), Query Frame = 2
Query:  707 DGSKAPFYAYYRDFDIEGC 763
            D SKAPF A+YR+++++GC
Sbjct:  208 DWSKAPFTAFYRNYNVDGC 226          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.432e-49
Identity = 104/255 (40.78%), Postives = 144/255 (56.47%), Query Frame = 3
Query:  174 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFMLITETLILRAAQVLDQQ----LCLEPRYWWGANNYQASPP*SKRI--DGSSHHMTYD-ID**SRPRTPP 917
            TF +++ VTW  +H+  +  G  + L +DQ+SG GF SK  Y  G   M+IK+  G++ G VTAFY+ S      DE+DFEFLGN  G+P T+QTN++ NG+G+RE+R  LWF+P   YH Y +LWN + IVFYVD++PIRVYKN     +P KP M V ++LW  DDW   GG  K   +   F+       L    +  +      C    YWW A NYQ      +++     S +M YD     S+ +TPP
Sbjct:   34 TFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGGG-HDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNENGVSYPSKP-MQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPP 286          
The following BLAST results are available for this feature:
BLAST of EY659743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH9_ARATH8.954e-5248.40Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH8.954e-5251.40Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH23_ARATH4.826e-5151.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH4.828e-5148.89Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH7.580e-5152.81Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH8.201e-5148.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH2.880e-5053.93Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH1.513e-4947.78Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH17_ARATH4.368e-4947.22Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH5.432e-4940.78Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659743 ID=EY659743; Name=EY659743; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGTAACCACAACTTATCAATTAAAGTTCTCTTTCTAATTAG
TAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCT
AAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCT
CTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACA
TGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCT
AGTTCTAGACCAAAATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACT
TGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCT
GGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGA
CGAGCTTGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGG
TCCAGACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTG
AACCTCTGGTTTGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTG
GAACCATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTT
ACAAAAACAGTGGAAGGGCTCCATTTCCAATGAAACCANCCATGGGGGTG
TATTCGACGCTGTGGGAAGCAGATGACTGGGGCAACAGAGGTGGTCTAGA
GAAATAGATGGNAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGA
TATTGAGGGCTGCCCAAGTTCTGGACCAGCAACTGTGCCTCGAACCCAGG
TACTGGTGGGGAGCAAATAATTATCAAGCCTCACCGCCATGAAGCAAAAG
AATCGATGGGTCGTCTCACCACATGACTTATGATATTGACTGATAATCAA
GACCCAGAACCCCCCCGTAT
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