EY659741

Overview
NameEY659741
Unique NameEY659741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659741 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 58/188 (30.85%), Postives = 90/188 (47.87%), Query Frame = 3
Query:   78 MHLDGTALE-ELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSIT-EVPPSIVRLKRVRGIYFGRNK-GLSLPITFSVDGLQNLRDLNLNDCGIM-ELPESLGLLSSVTTLHLEGNNFERI-PQSIIQLSNLERLFIRYCERLQSLPKLPCN 626
            +HL G  L  +LP  +  L++L H+ +       ++PS    L +L    +  CS    LP+ELGNL  L+ L       T E+P S   LK ++ + F  N+   S+P  FS   L+NL  L+L    +  E+PE +G L  +TTL L  NNF  + P  +     LE + +       ++P   C+
Sbjct:  206 IHLAGNVLGGKLPPRLGLLTELQHMEIGYNHFNGNIPSEFALLSNLKYFDVSNCSLSGSLPQELGNLSNLETLFLFQNGFTGEIPESYSNLKSLKLLDFSSNQLSGSIPSGFST--LKNLTWLSLISNNLSGEVPEGIGELPELTTLFLWNNNFTGVLPHKLGSNGKLETMDVSNNSFTGTIPSSLCH 391          
BLAST of EY659741 vs. ExPASy Swiss-Prot
Match: SHOC2_RAT (Leucine-rich repeat protein SHOC-2 OS=Rattus norvegicus GN=Shoc2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 66/237 (27.85%), Postives = 107/237 (45.15%), Query Frame = 3
Query:   78 MHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLP---------ITFSVDGLQ------------NLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPQSIIQLSNLERLFIRYCERLQSLPKLPCNLLS--LDAHHCTALESLPGLFPSSDESYLRTLY 719
            ++L    L+ LP+ + CL  L  L L++  SL SLP  L  LK L +L +   + L+ +P  +  L++L  L+     IT V   +  L R+  +    NK   LP         IT  V   Q             + +L+L    +++LP+++G LSS+  L L  N    IP+S+ + S LE L +       ++  LP +LLS  +  +  T   +   L+P    S   T+Y
Sbjct:  128 LYLYSNKLQSLPAEVGCLVNLMTLALSE-NSLTSLPDSLDNLKKLRMLDLRH-NKLREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLEN----NNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 358          
BLAST of EY659741 vs. ExPASy Swiss-Prot
Match: SHOC2_PONAB (Leucine-rich repeat protein SHOC-2 OS=Pongo abelii GN=SHOC2 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 66/237 (27.85%), Postives = 108/237 (45.57%), Query Frame = 3
Query:   78 MHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLP---------ITFSVDGLQ------------NLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPQSIIQLSNLERLFIRYCERLQSLPKLPCNLLS--LDAHHCTALESLPGLFPSSDESYLRTLY 719
            ++L    L+ LP+ + CL  L  L L++  SL SLP  L  LK L +L +   + L+ +P  +  L++L  L+     IT V   I  L ++  +    NK   LP         IT  V   Q             + +L+L    +++LP+++G LSS++ L L  N    IP+S+ + S LE L +       ++  LP +LLS  +  +  T   +   L+P    S   T+Y
Sbjct:  128 LYLYSNKLQSLPAEVGCLVNLMTLALSE-NSLTSLPDSLDNLKKLRMLDLRH-NKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLEN----NNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 358          
BLAST of EY659741 vs. ExPASy Swiss-Prot
Match: SHOC2_HUMAN (Leucine-rich repeat protein SHOC-2 OS=Homo sapiens GN=SHOC2 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 66/237 (27.85%), Postives = 108/237 (45.57%), Query Frame = 3
Query:   78 MHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLP---------ITFSVDGLQ------------NLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPQSIIQLSNLERLFIRYCERLQSLPKLPCNLLS--LDAHHCTALESLPGLFPSSDESYLRTLY 719
            ++L    L+ LP+ + CL  L  L L++  SL SLP  L  LK L +L +   + L+ +P  +  L++L  L+     IT V   I  L ++  +    NK   LP         IT  V   Q             + +L+L    +++LP+++G LSS++ L L  N    IP+S+ + S LE L +       ++  LP +LLS  +  +  T   +   L+P    S   T+Y
Sbjct:  128 LYLYSNKLQSLPAEVGCLVNLMTLALSE-NSLTSLPDSLDNLKKLRMLDLRH-NKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLEN----NNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 358          
BLAST of EY659741 vs. ExPASy Swiss-Prot
Match: SHOC2_BOVIN (Leucine-rich repeat protein SHOC-2 OS=Bos taurus GN=SHOC2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 66/237 (27.85%), Postives = 108/237 (45.57%), Query Frame = 3
Query:   78 MHLDGTALEELPSSIECLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLP---------ITFSVDGLQ------------NLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPQSIIQLSNLERLFIRYCERLQSLPKLPCNLLS--LDAHHCTALESLPGLFPSSDESYLRTLY 719
            ++L    L+ LP+ + CL  L  L L++  SL SLP  L  LK L +L +   + L+ +P  +  L++L  L+     IT V   I  L ++  +    NK   LP         IT  V   Q             + +L+L    +++LP+++G LSS++ L L  N    IP+S+ + S LE L +       ++  LP +LLS  +  +  T   +   L+P    S   T+Y
Sbjct:  128 LYLYSNKLQSLPAEVGCLVNLMTLALSE-NSLTSLPDSLDNLKKLRMLDLRH-NKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLEN----NNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 358          
BLAST of EY659741 vs. ExPASy Swiss-Prot
Match: LR10L_HUMAN (LRRC10-like protein ENSP00000367315 OS=Homo sapiens PE=4 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.155e-11
Identity = 53/172 (30.81%), Postives = 85/172 (49.42%), Query Frame = 3
Query:  102 EELPSSIE--CLSKLSHLGLADCKSLKSLPSGLCKLKSLDVLIIDGCSNLQRLPEELGNLEALDILHAIGTSITEVPPSIVRLKRVRGIYFGRNKGLSLPITFSVDGLQNLRDLNLNDCGIMELPESLGLLSSVTTLHLEGNNFERIPQSIIQLSNLERLFIRYCERLQSLP 611
            +ELPS  E    S    L L+  + L+ LPS +C L  L  L + G + L+ LPEE+  L  L IL      +  +P  + RL R+  +Y G N+ L+LP  F+   LQ+LR L +    +   P  L  L ++ +L +  N    +P  + +++ L  L++ Y  R +  P
Sbjct:    9 DELPSDAEEQLRSGDQQLELSG-RRLRRLPSAVCALSRLQKLYVSG-TGLRELPEEIEELRELRILALDFNKLERLPDGLCRLPRLTRLYLGGNRLLALPADFA--QLQSLRCLWIEGNFLRRFPRPLLRLVALQSLQMGDNRLRALPAELPRMTGLRGLWL-YGNRFEEFP 175          
The following BLAST results are available for this feature:
BLAST of EY659741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
Y5148_ARATH8.155e-1130.85Probable leucine-rich repeat receptor-like protein... [more]
SHOC2_RAT8.155e-1127.85Leucine-rich repeat protein SHOC-2 OS=Rattus norve... [more]
SHOC2_PONAB8.155e-1127.85Leucine-rich repeat protein SHOC-2 OS=Pongo abelii... [more]
SHOC2_HUMAN8.155e-1127.85Leucine-rich repeat protein SHOC-2 OS=Homo sapiens... [more]
SHOC2_BOVIN8.155e-1127.85Leucine-rich repeat protein SHOC-2 OS=Bos taurus G... [more]
LR10L_HUMAN8.155e-1130.81LRRC10-like protein ENSP00000367315 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659741 ID=EY659741; Name=EY659741; organism=Citrus sinensis; type=EST; length=956bp
CATTTCCCCCCCAATGGTACCCTGCAGCACCGGTCCGGAATTCTTCGTAA
ACCGCGCGTCCGCGGTAATATTTCCCGATGCATTTAGATGGAACTGCACT
GGAGGAACTGCCTTCGTCCATCGAGTGTCTATCTAAGCTTTCGCACTTGG
GCCTTGCAGATTGTAAAAGTCTCAAGAGTCTCCCAAGCGGCCTGTGTAAG
TTGAAATCTCTAGATGTTCTCATTATCGATGGTTGCTCGAATCTTCAGAG
ATTGCCCGAGGAACTTGGAAATTTAGAAGCTTTGGATATTTTGCACGCTA
TAGGAACTTCTATAACAGAAGTACCGCCATCCATCGTCCGTTTGAAAAGG
GTTCGTGGAATATATTTCGGGAGAAACAAGGGTTTATCATTGCCAATCAC
ATTCTCTGTAGATGGCTTGCAAAATCTAAGGGATTTAAATCTAAATGATT
GCGGCATCATGGAGTTACCTGAAAGTCTTGGCCTGTTATCCTCAGTAACA
ACACTGCATCTAGAGGGAAACAATTTTGAGAGAATACCACAAAGCATCAT
ACAACTTTCTAATTTGGAAAGGCTCTTCATAAGGTATTGCGAGAGGCTTC
AATCCTTACCAAAGCTTCCATGCAATCTACTTTCGTTGGATGCACATCAT
TGCACCGCACTGGAATCATTACCAGGTTTATTCCCAAGTAGTGATGAATC
TTATTTACGGACTTTATACCCTGAGCGATAATTTTAAATTGCATCGGAAT
GAGATTAGAGGAATTGCCCAAGGAGCTCCTGAAAAAATTCAACTTTTGGC
CACCCGCCCTCTAAAAGAACCACGGGAAAAGGATGTCCTTAATTAACTCT
CCTTTTTTATTAGAAACGAGCCTAAGAAAAACATGCCGCATGAACCATAC
CCCGGNGTGCGCAAATTAACGGTAATGGATAATCTGCCCTCTTTTTTTGA
CCCCAA
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