EY659738

Overview
NameEY659738
Unique NameEY659738
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_OREMO (Actin, cytoplasmic 1 OS=Oreochromis mossambicus GN=actb PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_MOUSE (Actin, cytoplasmic 1 OS=Mus musculus GN=Actb PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_MESAU (Actin, cytoplasmic 1 OS=Mesocricetus auratus GN=ACTB PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_MACFA (Actin, cytoplasmic 1 OS=Macaca fascicularis GN=ACTB PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_HUMAN (Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_HORSE (Actin, cytoplasmic 1 OS=Equus caballus GN=ACTB PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_CHICK (Actin, cytoplasmic 1 OS=Gallus gallus GN=ACTB PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_CERPY (Actin, cytoplasmic 1 OS=Cercopithecus pygerythrus GN=ACTB PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  282 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 361
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_CERAE (Actin, cytoplasmic 1 OS=Cercopithecus aethiops GN=ACTB PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTB_CAVPO (Actin, cytoplasmic 1 OS=Cavia porcellus GN=ACTB PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.622e-36
Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
The following BLAST results are available for this feature:
BLAST of EY659738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
ACTB_OREMO1.622e-3688.75Actin, cytoplasmic 1 OS=Oreochromis mossambicus GN... [more]
ACTB_MOUSE1.622e-3688.75Actin, cytoplasmic 1 OS=Mus musculus GN=Actb PE=1 ... [more]
ACTB_MESAU1.622e-3688.75Actin, cytoplasmic 1 OS=Mesocricetus auratus GN=AC... [more]
ACTB_MACFA1.622e-3688.75Actin, cytoplasmic 1 OS=Macaca fascicularis GN=ACT... [more]
ACTB_HUMAN1.622e-3688.75Actin, cytoplasmic 1 OS=Homo sapiens GN=ACTB PE=1 ... [more]
ACTB_HORSE1.622e-3688.75Actin, cytoplasmic 1 OS=Equus caballus GN=ACTB PE=... [more]
ACTB_CHICK1.622e-3688.75Actin, cytoplasmic 1 OS=Gallus gallus GN=ACTB PE=1... [more]
ACTB_CERPY1.622e-3688.75Actin, cytoplasmic 1 OS=Cercopithecus pygerythrus ... [more]
ACTB_CERAE1.622e-3688.75Actin, cytoplasmic 1 OS=Cercopithecus aethiops GN=... [more]
ACTB_CAVPO1.622e-3688.75Actin, cytoplasmic 1 OS=Cavia porcellus GN=ACTB PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659738 ID=EY659738; Name=EY659738; organism=Citrus sinensis; type=EST; length=492bp
CCACGCGTCCGCAATATTGTCCTTAGTGGTGGCTCCACCATGTTCCCAGG
TATTGCTGATAGAATGAGCAAGGAGATCACTGCATTGGCTCCAAGTAGCA
TGAAGATCAAGGTGGTAGCACCACCAGAGAGGAAGTACAGTGTCTGGATA
GGAGGCTCGATATTGGCTTCCCTCAGCACCTTCCAGCAGATGTGGATCGC
AAAGGCAGAATATGATGAGTCTGGACCATCAATTGTCCACAGAAAATGCT
TCTAATCGTGGAAAGAGAAATGCAATGAGGAAACATATACCAGACATTTT
GTATTAAGGAAAGGCTTCTTCCAATCAAGCGGTTGTTCGAAGTTTCTTTT
TTCTCATCCTTTTCGTTCTTGTTTCTTTTTCGTGTTTTCGTCCTTTGATG
TCTGAACAATGAATATGGGGGGATTCAATTCTTTACATTATTATTTGTTA
GTAGAAGAGTATTGGATTGTTAAAAAAAAAAAAAAAAAAAAA
back to top