EY659738

Overview
NameEY659738
Unique NameEY659738
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT1_ACACA (Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 4.270e-37
Identity = 71/80 (88.75%), Postives = 78/80 (97.50%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N+VLSGG+TMFPGIADRM KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NVVLSGGTTMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT3_DICDI (Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 5.576e-37
Identity = 71/80 (88.75%), Postives = 78/80 (97.50%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N+VLSGGSTMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASL TFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  297 NVVLSGGSTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLPTFQQMWISKEEYDESGPSIVHRKCF 376
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT22_DICDI (Putative actin-22 OS=Dictyostelium discoideum GN=act22 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 5.576e-37
Identity = 71/80 (88.75%), Postives = 79/80 (98.75%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N+VLSGG+TMFPGIADRM+KE+T+LAPS+MKIK+VAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  297 NVVLSGGTTMFPGIADRMNKELTSLAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 376
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT_THELA (Actin OS=Thermomyces lanuginosus PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 7.283e-37
Identity = 70/80 (87.50%), Postives = 78/80 (97.50%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIV+SGG+TM+PGIADRM KE+TALAPSSMKIK++APPERKYSVWIGGSILASLSTFQQMW++K EYDESGPSIVHRKCF
Sbjct:  296 NIVMSGGTTMYPGIADRMQKELTALAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWVSKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT_PLAMG (Actin, adductor muscle OS=Placopecten magellanicus PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 7.283e-37
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TMFPGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  297 NTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT_CRAGI (Actin OS=Crassostrea gigas PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 7.283e-37
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIVLSGG+TMFPGIADRM KE+TALAP +MKIKV+APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  297 NIVLSGGTTMFPGIADRMQKEVTALAPPTMKIKVIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTC_BRALA (Actin, cytoplasmic OS=Branchiostoma lanceolatum PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 7.283e-37
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TMFPGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTC_BRAFL (Actin, cytoplasmic OS=Branchiostoma floridae PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 7.283e-37
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TMFPGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACTC_BRABE (Actin, cytoplasmic OS=Branchiostoma belcheri PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 7.283e-37
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            N VLSGG+TMFPGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659738 vs. ExPASy Swiss-Prot
Match: ACT_EXODE (Actin OS=Exophiala dermatitidis PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 9.512e-37
Identity = 70/80 (87.50%), Postives = 78/80 (97.50%), Query Frame = 1 
Query:   13 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 252
            NIV+SGG+TM+PGIADRM KEITALAPSSMK++++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  296 NIVMSGGTTMYPGIADRMQKEITALAPSSMKVRIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
The following BLAST results are available for this feature:
BLAST of EY659738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
ACT1_ACACA4.270e-3788.75Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1[more]
ACT3_DICDI5.576e-3788.75Actin-3 OS=Dictyostelium discoideum GN=act3 PE=3 S... [more]
ACT22_DICDI5.576e-3788.75Putative actin-22 OS=Dictyostelium discoideum GN=a... [more]
ACT_THELA7.283e-3787.50Actin OS=Thermomyces lanuginosus PE=3 SV=1[more]
ACT_PLAMG7.283e-3790.00Actin, adductor muscle OS=Placopecten magellanicus... [more]
ACT_CRAGI7.283e-3790.00Actin OS=Crassostrea gigas PE=2 SV=1[more]
ACTC_BRALA7.283e-3790.00Actin, cytoplasmic OS=Branchiostoma lanceolatum PE... [more]
ACTC_BRAFL7.283e-3790.00Actin, cytoplasmic OS=Branchiostoma floridae PE=2 ... [more]
ACTC_BRABE7.283e-3790.00Actin, cytoplasmic OS=Branchiostoma belcheri PE=2 ... [more]
ACT_EXODE9.512e-3787.50Actin OS=Exophiala dermatitidis PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659738 ID=EY659738; Name=EY659738; organism=Citrus sinensis; type=EST; length=492bp
CCACGCGTCCGCAATATTGTCCTTAGTGGTGGCTCCACCATGTTCCCAGG
TATTGCTGATAGAATGAGCAAGGAGATCACTGCATTGGCTCCAAGTAGCA
TGAAGATCAAGGTGGTAGCACCACCAGAGAGGAAGTACAGTGTCTGGATA
GGAGGCTCGATATTGGCTTCCCTCAGCACCTTCCAGCAGATGTGGATCGC
AAAGGCAGAATATGATGAGTCTGGACCATCAATTGTCCACAGAAAATGCT
TCTAATCGTGGAAAGAGAAATGCAATGAGGAAACATATACCAGACATTTT
GTATTAAGGAAAGGCTTCTTCCAATCAAGCGGTTGTTCGAAGTTTCTTTT
TTCTCATCCTTTTCGTTCTTGTTTCTTTTTCGTGTTTTCGTCCTTTGATG
TCTGAACAATGAATATGGGGGGATTCAATTCTTTACATTATTATTTGTTA
GTAGAAGAGTATTGGATTGTTAAAAAAAAAAAAAAAAAAAAA
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