EY659733

Overview
NameEY659733
Unique NameEY659733
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length468
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2038 contig Csv1_Contig2038:52..520. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 7.966e-16
Identity = 37/46 (80.43%), Postives = 44/46 (95.65%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 145
            GD+RSSIFDAKAGI+L+K FVKLVSWYDNEWGYS RV+DL+V++AK
Sbjct:  287 GDNRSSIFDAKAGISLNKNFVKLVSWYDNEWGYSRRVLDLLVYIAK 332          
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P2_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=TDH2 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 7.966e-16
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 145
            F+GDS SSIFDA AGI LS KFVKLVSWYDNE+GYSTRVVDL+ H+AK
Sbjct:  284 FLGDSNSSIFDAAAGIQLSPKFVKLVSWYDNEYGYSTRVVDLVEHVAK 331          
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P_TRISI (Glyceraldehyde-3-phosphate dehydrogenase OS=Trionyx sinensis GN=GAPDH PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.775e-15
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 151
            F GDSRSSIFDA AGIAL+  FVKLVSWYDNE+GYS RVVDL+VHMA  +
Sbjct:  284 FNGDSRSSIFDAAAGIALNDNFVKLVSWYDNEFGYSNRVVDLLVHMASKE 333          
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P_HOMAM (Glyceraldehyde-3-phosphate dehydrogenase OS=Homarus americanus PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.775e-15
Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 145
            F+GD+RSSIFDAKAGI LSK FVK+VSWYDNE+GYS RV+DL+ HM K
Sbjct:  282 FIGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLLKHMQK 329          
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P_PANVR (Glyceraldehyde-3-phosphate dehydrogenase OS=Panulirus versicolor PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.318e-15
Identity = 38/48 (79.17%), Postives = 42/48 (87.50%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 145
            F GD+RSSIFDAKAGI LSK FVK+VSWYDNE+GYS RV+DLI HM K
Sbjct:  282 FTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRVIDLIKHMQK 329          
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.318e-15
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVH 136
            FVG+  SSIFDAKAGIAL K FVKLVSWYDNEWGYS RVVDL++H
Sbjct:  290 FVGEPMSSIFDAKAGIALDKTFVKLVSWYDNEWGYSNRVVDLLLH 334          
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P_EMENI (Glyceraldehyde-3-phosphate dehydrogenase OS=Emericella nidulans GN=gpdA PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.027e-15
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 145
            GD+RSSIFDAKAGIAL+  F+KLVSWYDNEWGYS RVVDLI +++K
Sbjct:  287 GDTRSSIFDAKAGIALNSNFIKLVSWYDNEWGYSRRVVDLITYISK 332          
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.163e-15
Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 2
Query:    5 VGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 145
            +GD+ SSIFDAKAGIAL++ F+KLVSWYDNEWGYS RVVDLI +++K
Sbjct:  288 IGDAHSSIFDAKAGIALNEHFIKLVSWYDNEWGYSRRVVDLIAYISK 334          
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.163e-15
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 142
            F+GD+ SSIFDA AGI LS KFVKLVSWYDNE+GYSTRVVDL+ H+A
Sbjct:  283 FLGDNNSSIFDASAGIMLSPKFVKLVSWYDNEYGYSTRVVDLVEHVA 329          
BLAST of EY659733 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.163e-15
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 2
Query:    8 GDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 145
            GDSRSSIFDA AGIAL+  F+KL+SWYDNEWGYS RVVDLI ++AK
Sbjct:  287 GDSRSSIFDASAGIALNDHFIKLISWYDNEWGYSRRVVDLIAYIAK 332          
The following BLAST results are available for this feature:
BLAST of EY659733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
G3P_COCHE7.966e-1680.43Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P2_YEAST7.966e-1681.25Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Sacc... [more]
G3P_TRISI1.775e-1578.00Glyceraldehyde-3-phosphate dehydrogenase OS=Triony... [more]
G3P_HOMAM1.775e-1577.08Glyceraldehyde-3-phosphate dehydrogenase OS=Homaru... [more]
G3P_PANVR2.318e-1579.17Glyceraldehyde-3-phosphate dehydrogenase OS=Panuli... [more]
G3P_MASBA2.318e-1582.22Glyceraldehyde-3-phosphate dehydrogenase OS=Mastig... [more]
G3P_EMENI3.027e-1578.26Glyceraldehyde-3-phosphate dehydrogenase OS=Emeric... [more]
G3P_ASPOR5.163e-1574.47Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3P_ASHGO5.163e-1578.72Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3P_AJECA5.163e-1578.26Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659733 ID=EY659733; Name=EY659733; organism=Citrus sinensis; type=EST; length=468bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATTTGTGAAGCTTGTCTCATGGTATGACAATGAGTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGGCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTTGTGCTAAG
TGTGGTGTTTCTTTGCGCTAAATGTGGTGTTTGTGTTTCTATGTAGAGGG
TCTGAGTTTAAATAAAATTGTTTCCAAGACATTATCCAGAGCCTTACCTG
CTCATGCAGGNTTGTGCTTAGATTTTCCCTTGTAGTATGCAAGAAGAGTT
GGTGAACCAACTTATGTTTTGTTAGCGAGAAAACAATTGTCTATTGGAAA
CTCGCTTTTATATTTTTCATCTAGTTAGTATCGAAGACCTGTTCTTCAGC
TGTTAAAAAAAAAAAAAA
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