EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_HAEPS (Glycogen synthase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=glgA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.182e-25
Identity = 85/252 (33.73%), Postives = 122/252 (48.41%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQEL---VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            D+ DN  RF+LL     +    L+          +G   V  A+DW   L   YLK+   P       K VF IHNIAY GRF       L LP +F    + ++ Y +      I+++KAG+  +D V  VSP YA+E+   ++G      L   + +  ++GI+NG+D   WNP TD  I   Y  +  M  K   K  LQ   GLP D++  +   + RL EQKG+D L A I   ++   Q +VLG+G
Sbjct:  101 DYTDNYKRFALLGYLGAQLASGLD--------HWWGRSDVLHAHDWQAGLACAYLKSWNSP------VKSVFTIHNIAYPGRFQAYHLAELALPWEF-FHVNGLEFYGE------ISYLKAGLFYADRVTAVSPTYAREITEQIAGAGMHGLLQQRLAEGALRGILNGVDDTVWNPETDTNIVANYRPN-YMQGKGKNKSELQRYFGLPEDKDALLFVMVTRLTEQKGADFLLARIDQIMQHNVQLVVLGSG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_CHLP8 (Glycogen synthase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glgA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.182e-25
Identity = 69/212 (32.55%), Postives = 105/212 (49.53%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD--FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKK 775
            NDWH  L+P   +T Y     +K  K+V  +HN+  QG F          P  F+   D    DG  +   G  IN +  GI  +D+V T SP YA+++ S  +    +D  ++  K    GI+NGMD ++WNP +DK I  +Y A+   + K   K+ L  EVGLP     PV+  I   ++ +G  +L  ++   ++   Q IV G+G K
Sbjct:  148 NDWHAGLVPLLARTRYAKHDFFKKVKIVQSVHNVYRQGVFQ---------PKMFQKHLDPEVFDGLER--EGDDINLLATGIKYADLVTTTSPSYAKQIASDPESSFGMDKALKACKDRFHGILNGMDTRQWNPSSDKLIKKRYSAAQ-PELKLEDKKVLLEEVGLPFSEETPVVGVITTFDDVQGMGLLKESLSKLLELDLQLIVSGSGNK 347          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 86/253 (33.99%), Postives = 127/253 (50.20%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKV-VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKE-KCQNIVLGTG 769
            D QDN LRF L         R++   +       +  DVV   NDW   L P  L        M++S    VF IHN+AYQG F    F  LNLP Q          Y       K++++K GI  +D + TVSP YA+E+++ + +G  LD ++  R   + GI+NG+D +EW+P  D+++  +Y A   +  K   K ALQ    LP    IP++  +GR+  QKG D+L  A  P +   + Q +V+G+G
Sbjct:  107 DWQDNYLRFGLFA-------RLIEHLALDRAGLDWRPDVVH-CNDWQAGLAPLMLS-------MHESRPATVFTIHNLAYQGLFPRHAFDALNLPPQLWH-------YQGLEFHGKLSFIKGGIGFADHITTVSPSYAREILTPQ-QGFGLDGLLNHRAGVLTGILNGVDYREWDPGKDRHLVARYSADD-LSGKARCKAALQHHFKLPCHSGIPLLGHVGRMVAQKGVDLLLKAAEPLLAAGEAQLVVVGSG 335          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SALTY (Glycogen synthase OS=Salmonella typhimurium GN=glgA PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 77/252 (30.56%), Postives = 128/252 (50.79%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G+ ++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q  +LG G
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNGQ-LSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SALSV (Glycogen synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=glgA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 77/252 (30.56%), Postives = 128/252 (50.79%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G+ ++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q  +LG G
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNGQ-LSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SALPK (Glycogen synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=glgA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 77/252 (30.56%), Postives = 128/252 (50.79%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G+ ++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q  +LG G
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNGQ-LSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SALPC (Glycogen synthase OS=Salmonella paratyphi C (strain RKS4594) GN=glgA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 77/252 (30.56%), Postives = 128/252 (50.79%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G+ ++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q  +LG G
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNGQ-LSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYKRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SALPB (Glycogen synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=glgA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 77/252 (30.56%), Postives = 128/252 (50.79%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G+ ++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q  +LG G
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNGQ-LSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SALPA (Glycogen synthase OS=Salmonella paratyphi A GN=glgA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 77/252 (30.56%), Postives = 128/252 (50.79%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G+ ++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q  +LG G
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNGQ-LSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAG 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_SALNS (Glycogen synthase OS=Salmonella newport (strain SL254) GN=glgA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 77/252 (30.56%), Postives = 128/252 (50.79%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            + DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G+ ++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q  +LG G
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNGQ-LSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAG 330          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_HAEPS7.182e-2533.73Glycogen synthase OS=Haemophilus parasuis serovar ... [more]
GLGA_CHLP87.182e-2532.55Glycogen synthase OS=Chlorobaculum parvum (strain ... [more]
GLGA_THISH9.380e-2533.99Glycogen synthase OS=Thioalkalivibrio sp. (strain ... [more]
GLGA_SALTY9.380e-2530.56Glycogen synthase OS=Salmonella typhimurium GN=glg... [more]
GLGA_SALSV9.380e-2530.56Glycogen synthase OS=Salmonella schwarzengrund (st... [more]
GLGA_SALPK9.380e-2530.56Glycogen synthase OS=Salmonella paratyphi A (strai... [more]
GLGA_SALPC9.380e-2530.56Glycogen synthase OS=Salmonella paratyphi C (strai... [more]
GLGA_SALPB9.380e-2530.56Glycogen synthase OS=Salmonella paratyphi B (strai... [more]
GLGA_SALPA9.380e-2530.56Glycogen synthase OS=Salmonella paratyphi A GN=glg... [more]
GLGA_SALNS9.380e-2530.56Glycogen synthase OS=Salmonella newport (strain SL... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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