EY659732

Overview
NameEY659732
Unique NameEY659732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_BORPD (Glycogen synthase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=glgA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.326e-20
Identity = 77/256 (30.08%), Postives = 126/256 (49.22%), Query Frame = 2
Query:   26 HQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKE--KCQNIVLGTGKKPW 781
            + DN +RF+ L  AA+     L         G    D++  A DWH  L+P  ++      G+ +  K V  +HN+A+QG F  E  G + +P  + +     DG    + GR IN+MKAG+  +D + TVS +YA+E+++ E  G  LD ++  R   +  I NG+D   WNP +D ++G    ++     K   K ALQ   GL  D+   ++    RL  QK +D+   A+P  +      Q  ++G G++ +
Sbjct:  108 YADNAVRFAALAHAAMRVAAGL--------PGMRRPDILH-AQDWHAGLVPLLVRAA----GL-RYVKTVLTVHNLAFQGSFELECAGQIGVPGAYCTD----DGAR--LHGR-INFMKAGLRYADRITTVSRNYAREIMTPE-FGCGLDPLLRARAADLAPIPNGIDDALWNPASDPHLGHLCYSARNPARKSRAKAALQKAFGLHPDQGAALLAMGSRLTSQKMADVAVEALPDALHRHPSLQVAIIGRGERQY 341          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_FLAJ1 (Glycogen synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=glgA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.956e-20
Identity = 74/209 (35.41%), Postives = 102/209 (48.80%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNI---VLGTG 769
            +D HT LIP  L+  YK + + K  K V  IHN  YQG F F+   L  LP        F++  N       IN +  G+  ++ V TVSP Y  E+    +    L N +R    KGI+NG+D++ WNPL D+ I   Y        K   KE L  +  L  D + P+  FIGRL E+KG D+L  A    + E  + I   +LG+G
Sbjct:  133 HDHHTGLIPFLLQFAYKYENL-KDVKTVITIHNGLYQGWFGFDK--LYYLPEFDLKHIGFLEWNNC------INSLAVGVKCANAVTTVSPSYLNEINYSANGLESLFNSVRNKS-KGILNGIDIEIWNPLKDQMIAANYSIENFEIGKQKNKEKLCEQFEL--DPSKPLFSFIGRLFEEKGGDLLPQASALALSEHFEEINILILGSG 329          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_AGRRK (Glycogen synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glgA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.956e-20
Identity = 84/251 (33.47%), Postives = 125/251 (49.80%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTG 769
            D+ DN  RF+ L  A  E        +     G +  D+V V +DW ++L+P Y++  Y P     S   V  IHNIA+QG+F    F  L LPA    S   I+ Y        I ++K G+  +  + TVSP YA E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  I   Y AST+ D + + ++ +    GL  D + P+   + RL  QKG D+LA+     +    +  +LG G
Sbjct:  103 DYPDNWQRFAALSLAGAEI-------AAGQMPG-WQPDLVHV-HDWQSALVPVYMR--YAPTPELPS---VLTIHNIAFQGQFGPSIFPGLRLPAH-AYSMQGIEYYGD------IGFLKGGLQTAHALTTVSPSYAGEILTPEF-GMGLEGVIASRAASLHGIVNGIDDGIWNPETDPMIARTYGASTLKD-RAINRKQVVEHFGLD-DDDGPIFCVVSRLTWQKGMDLLASISSEIVAMGGKLAILGAG 329          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA2_RHIME (Glycogen synthase 2 OS=Rhizobium meliloti GN=glgA2 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.085e-20
Identity = 78/259 (30.12%), Postives = 124/259 (47.88%), Query Frame = 2
Query:   23 DHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            D+ DN  RF+     A +  R L  N   +         +  A+DWH ++   YLK          +   V  +HN+A+QG+F    F  L LPA+   S D ++ Y        I ++K G+  +D +  VSP YA+E++S    G+ L+ ++  R   + GIVNG+D++ W+P +D  I   Y A   +   P  ++ L    GLP D   P+   + RL  QKG D+LAA     +K     I+ G G++   ++F
Sbjct:  103 DYADNWKRFAAFSLVASQIARGLVPNWRPH---------IIHAHDWHAAMSLLYLKYAGDD-----TIPRVLTVHNLAFQGQFPAHYFPELGLPAE-AYSIDGVEYYGD------IGFLKGGLQAADAITVVSPTYAREIMSPAF-GMGLEGVMNERHADVVGIVNGIDLEVWDPSSDPCIEHHYSARVPLRRLP-NRQVLLRHFGLP-DTCGPIFASVNRLTWQKGMDLLAATAGEIVKNGGTLIIHGQGEEKLEAAF 337          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_RHIL3 (Glycogen synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19
Identity = 81/255 (31.76%), Postives = 125/255 (49.02%), Query Frame = 2
Query:   14 LESDHQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGK 772
            L  D+ DN  RF+ L  AA E    L           +  D+V   +DW  +L   Y++  Y P     S   V  IHNIA+QG+F  E F  L LPA   ++ + I+ Y        + ++K G+  +  + TVSP YA E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  +   Y  +T+ + +   + ++    GL  D + P+   I RL  QKG DI+A      +    + +VLG+G+
Sbjct:  100 LGKDYPDNWRRFAALSLAASEIAAGLMPG--------WRPDLVHT-HDWQAALTSVYMR--YYPTPELPS---VLTIHNIAFQGQFGSEIFAGLRLPAHAFTT-ESIEYYGT------VGFLKGGLKTAHAITTVSPTYADEILTSEF-GMGLEGVIASRVDDLHGIVNGIDTDIWNPATDPVVHTHYGQTTLKNREE-NRRSIAEFFGLDND-DAPIFCVISRLTWQKGMDIVANVADEIVAMGGKLVVLGSGE 330          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA1_ANAVT (Glycogen synthase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19
Identity = 80/249 (32.13%), Postives = 124/249 (49.80%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGL--LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGT 766
            D+ +RF+   +AALE        SNK        D++   +DW T L+P  L  +YK  GM  + +V + IHN  +QG    +      LN  A +  +    D +N       +N+MK GI+ S+ V TVSP++A E     D G  L + +   K    GI+NG+D   WNP  D+YI   Y+     + K   K+AL+  + L    + P+I +IGRL+ QKG  ++  AI   + +  Q ++LG+
Sbjct:  107 DDDMRFAFFSKAALEFLH----QSNKR------PDIIH-CHDWQTGLVPVMLYEIYKYHGM-DTQRVCYTIHNFKHQGIGGVKTLWATGLNREAYYFQNDKLQDDFNPFA----LNYMKGGIVYSNAVTTVSPNHALE-AQYTDVGCGLGHTLYQHKDKFSGILNGIDYDFWNPEIDRYIPYNYNQED-FEQKLYNKKALRERLLLQA-ADKPIIAYIGRLDNQKGVHLVHHAIYHSLNKGAQFVLLGS 336          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROA2 (Glycogen synthase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glgA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.643e-19
Identity = 63/209 (30.14%), Postives = 102/209 (48.80%), Query Frame = 2
Query:  155 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKK 775
            DW+  L+P  LKTMY     +K  + V  +HN   QG +  + F  + LP++       ID  +  V    +N +   +   D V T S  YA  L  G  +   LD +I K  +G+ GI NG+D ++WNP  DK I  K+D   + + K   K+ L  E G+ ++   P++  +   E  +GS++L  +I   ++   Q +V  +G K
Sbjct:  149 DWYAGLVPLLLKTMYADCEFFKDIRTVLTVHNAYRQGIYPLKGFKKM-LPSEV------IDKMH--VEDDTVNMLFTAVEHFDAVTTTSDAYAGMLADGRSEAFGLDRVIEKRASGLVGIANGLDAKQWNPAADKMIKKKFDIERLSE-KTENKKYLLEEFGMELEEATPLVGSVINAERFQGSELLMESIDGLMELDIQLVVSVSGDK 347          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_PROM4 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=glgA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.452e-19
Identity = 68/228 (29.82%), Postives = 111/228 (48.68%), Query Frame = 2
Query:  140 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKKPWXSSFDSWRYCT 814
            V   +DWHT +IP ++               VF IHN+ YQG + ++   +   P   +                  + M   +L +D V  VSP YA+E+ + E  G +LD ++      ++GI+NG+D+ +WNP TDK +   + AS ++  +   K ALQ+++GL V  N  ++  +GRL +QKG D+L       +     Q +VLGTG+    S+   W+  T
Sbjct:  124 VLHCHDWHTGMIPVWMH-------QDPEISTVFTIHNLKYQGPWRWKLERMTWCPWYMQGD----------------HTMAVAMLYADRVNAVSPTYAKEICTSE-YGEKLDGLLNYISGKLRGILNGIDLDDWNPETDKALPANFSASNILGRRK-NKAALQSQMGLDVKPNSYLLGMVGRLVDQKGVDLLLQVARRLLAYTDSQIVVLGTGESALESAL--WQLAT 324          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_NOVAD (Glycogen synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=glgA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.452e-19
Identity = 67/217 (30.88%), Postives = 111/217 (51.15%), Query Frame = 2
Query:  149 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIKEKCQNIVLGTGKKPWXSSF 793
            A+DW  ++   YL+    P G  +    V  IHN+A+QG +  + F  L LP Q   + D ++ +        + ++KAG+  +  + TVSP YA+E+ + E  G+ L+ ++   G  + GIVNG+D  +WNP TD  +  ++   + +  +   K AL+AE  L  D   P+   I RL  QKG D+L   I   +    +  +LG+G K   ++F
Sbjct:  138 AHDWQAAMALAYLRFAPPPGG--RRVPSVMTIHNMAFQGHYGADLFPALGLPPQ-AWAMDGVEYHGG------VGYLKAGLEAASAITTVSPTYAREIRTPEF-GMGLEGLVVSRGNRVSGIVNGIDTAQWNPETDPALAARFGVKS-LARRVTNKRALEAEFALEADDG-PLFVVITRLTWQKGIDVLLECIDHLVGIGGRLALLGSGDKAMENAF 342          
BLAST of EY659732 vs. ExPASy Swiss-Prot
Match: GLGA_TRIEI (Glycogen synthase OS=Trichodesmium erythraeum (strain IMS101) GN=glgA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 71/211 (33.65%), Postives = 110/211 (52.13%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK-TG-IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIXFIGRLEEQKGSDILAAAIPPFIK-EKCQNIVLGTGKK 775
            NDWHT +IP ++             K VF IHN+AYQG + +    +   P        +++G+N          M A +  +D V TVSP YA ++ +    G  LD ++   TG + GI+NG+D+  +NP  D+YI   YD +T ++ +   K ALQ EVG  V++N  ++  + RL EQKG D++   +  F+     Q I+LGTG +
Sbjct:  128 NDWHTGMIPVWMHET-------PDIKTVFTIHNLAYQGPWRWYLERITWCPW-------YMEGHNT---------MAAAVQFADRVTTVSPTYASQIQTPA-YGENLDGLMSFITGKLHGILNGIDMNFYNPANDRYIPQTYDVNT-LEKRVDNKIALQEEVGFEVNKNSFLMGMVSRLVEQKGLDLMLQVLDRFMAYTDTQFILLGTGDR 313          
The following BLAST results are available for this feature:
BLAST of EY659732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
GLGA_BORPD5.326e-2030.08Glycogen synthase OS=Bordetella petrii (strain ATC... [more]
GLGA_FLAJ16.956e-2035.41Glycogen synthase OS=Flavobacterium johnsoniae (st... [more]
GLGA_AGRRK6.956e-2033.47Glycogen synthase OS=Agrobacterium radiobacter (st... [more]
GLGA2_RHIME9.085e-2030.12Glycogen synthase 2 OS=Rhizobium meliloti GN=glgA2... [more]
GLGA_RHIL31.550e-1931.76Glycogen synthase OS=Rhizobium leguminosarum bv. v... [more]
GLGA1_ANAVT1.550e-1932.13Glycogen synthase 1 OS=Anabaena variabilis (strain... [more]
GLGA_PROA22.643e-1930.14Glycogen synthase OS=Prosthecochloris aestuarii (s... [more]
GLGA_PROM43.452e-1929.82Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_NOVAD3.452e-1930.88Glycogen synthase OS=Novosphingobium aromaticivora... [more]
GLGA_TRIEI4.509e-1933.65Glycogen synthase OS=Trichodesmium erythraeum (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659732 ID=EY659732; Name=EY659732; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGGACTGGAGAGTGACCACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGG
TGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATTA
AGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGAC
AAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCC
TCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAA
ATATTCCTGTCATANGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCA
GATATTCTTGCAGCTGCCATTCCCCCATTCATCAAAGAGAAATGTCAGAA
TATAGTCCTTGGTACTGGCAAAAAACCATGGNAGAGCAGCTTTGACAGTT
GGAGATACTGTACCCTGAGAAAGCCAGAGAGTAGCGAAAATCAATATTCC
TCTGGCGCATATGATTATAGCAGAGCTGATTTTATTTTGATCCNAGCAGA
ATTGAACTTGTGGCCTCATCAAT
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