EY659711

Overview
NameEY659711
Unique NameEY659711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_METVS (50S ribosomal protein L2P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.443e-57
Identity = 116/246 (47.15%), Postives = 157/246 (63.82%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ + +Q +G G+  ++S +H RKG  ++RS D  E+ G + G V +++HDPGR AP+A+V F +      ++ L +  EG+  G+ + CG  A +  GNVLP+  IPEG  V N+E   GD G L RA G YA +++H  D   T VKLPSG  K++   CRA IG VAGGGR EKP +KAG  +H    K   WPKVRGVAMN V+HP+GGG HQH+G  S+  R+  P +KVG IA+ RTGR
Sbjct:    1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVAKVRFANG-----EERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHIASRRTGR 239          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_METTH (50S ribosomal protein L2P OS=Methanobacterium thermoautotrophicum GN=rpl2p PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 7.108e-57
Identity = 119/246 (48.37%), Postives = 155/246 (63.01%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ + +QR+G G+  ++S +H  KG  ++R+ D  E  G LKG V +I+HDPGR AP+ARV F +      ++ L +A E +   + V CG KA +  GN LP+  IPEG  + N+E+  GD G L R+SG YA +I+H  D D   ++LPSG  K +   CRA +G VAGGGR EKP LKAG  YH  R K      VRGVAMN V+HPHGGGN QH G  +T  R APP +KVG IAA RTG+
Sbjct:    1 MGKRLISQRRGRGTPTYRSASHRFKGKIKYRAYDSIESEGSLKGKVVDIMHDPGRTAPVARVKFENG-----EERLILAPEALMLNEEVECGVKARVKPGNSLPLSEIPEGTPIYNIENRPGDGGKLVRSSGTYASLITH--DADKAVIELPSGELKALNPQCRATVGVVAGGGRREKPFLKAGKKYHALRAKGKKSVTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIAARRTGK 239          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_METJA (50S ribosomal protein L2P OS=Methanocaldococcus jannaschii GN=rpl2p PE=3 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 1.212e-56
Identity = 117/246 (47.56%), Postives = 156/246 (63.41%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST-GRRDAPPDQKVGLIAAXRTG 746
            MG+ + +QR+G GS V+   +H R+G A++R  D  E+ G + G + +I+HDPGR AP+A+V +        ++ L +  EG+  G  + CG  A +  GN+LP+ +IPEG  V N+E   GD G L RA G YA I++H  D + T VKLPSG  K + S CRA IG VAGGGR EKP +KAG  YH  + K   WP+VRGVAMN V+HP GGG HQH G  +T  R+  PP +KVG I+A RTG
Sbjct:    1 MGKRLISQRRGRGSSVYTCPSHKRRGEAKYRRFDELEKKGKVLGKIVDILHDPGRSAPVAKVEYE-----TGEEGLLVVPEGVKVGDIIECGVSAEIKPGNILPLGAIPEGIPVFNIETVPGDGGKLVRAGGCYAHILTH--DGERTYVKLPSGHIKALHSMCRATIGVVAGGGRKEKPFVKAGKKYHAMKAKAVKWPRVRGVAMNAVDHPFGGGRHQHTGKPTTVSRKKVPPGRKVGHISARRTG 239          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_AERPE (50S ribosomal protein L2P OS=Aeropyrum pernix GN=rpl2p PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.528e-56
Identity = 123/248 (49.60%), Postives = 151/248 (60.89%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGRLK 755
            MG+ +R QR G G+  ++S  H   GPA++  L        L+G V E+IHDPGR  PLARV       +     L  AAEGMY GQ +  G  A    GN+LP+  IPEG  V NVE   GD G LAR +G YA+++        T ++LPSG  K +P+  RA IG  AG GR EKP++KAG AYHK++VK   WP+VRGVAMN V+HP GGG HQH G  ST  R APP +KVG IAA RTGR K
Sbjct:    1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLARVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKVGHIAARRTGRRK 237          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_DESK1 (50S ribosomal protein L2P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 6.018e-56
Identity = 124/248 (50.00%), Postives = 151/248 (60.89%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGRLK 755
            MG+ I  QR+G  S VFK+  H    PA++  LD  +     K VV +++HDPGR  PLA+V       +        A EGMY GQ +  G  A  + GN+LPV  IPEG  V N+E   GD G   RASG YAVI+        T+V+LPSG    +P+  RAMIG +AGGGR EKPLLKAG AY+K+  K   WPKVRGVAMN   HPHGGG+HQH+G  ST  R+ PP +KVG IAA RTGR K
Sbjct:    1 MGKRIIPQRRGKASPVFKTPDHIHVAPARYPLLDPSKT---YKAVVEDLVHDPGRWVPLAQVKLETGLVFYVP-----AVEGMYAGQIIEIGPGAKPVNGNILPVGMIPEGMQVVNIEKRPGDGGKFVRASGTYAVIVGRA--GGKTQVQLPSGRVIEVPNESRAMIGVIAGGGRLEKPLLKAGAAYYKWSAKSRVWPKVRGVAMNAAFHPHGGGSHQHVGRPSTVARNTPPGRKVGHIAARRTGRRK 238          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_METVA (50S ribosomal protein L2P OS=Methanococcus vannielii GN=rpl2p PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.026e-55
Identity = 114/244 (46.72%), Postives = 155/244 (63.52%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRT 743
            MG+ + +Q +G G+  ++S +H RKG  ++RS D  E+ G + G V +++HDPGR AP+A+V F +      ++ L +  EG+  G+ + CG  A +  GNVLP+  IPEG  V N+E   GD G L RA G YA +++H  D   T VKLPSG  K++   CRA IG VAGGGR EKP +KAG  +H    K   WPKVRGVAMN V+HP+GGG HQH+G  S+  R+  P +KVG IA+ RT
Sbjct:    1 MGKRLISQNRGRGTPKYRSPSHKRKGEVKYRSYDEMEKVGKVLGTVIDVLHDPGRSAPVAKVRFANG-----EERLVLIPEGISVGEQIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRAGGCYAHVVAH--DIGKTIVKLPSGYAKVLNPACRATIGVVAGGGRKEKPFVKAGKKHHSLSAKAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHIASRRT 237          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_PYRFU (50S ribosomal protein L2P OS=Pyrococcus furiosus GN=rpl2p PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.987e-55
Identity = 121/248 (48.79%), Postives = 153/248 (61.69%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGRLK 755
            MG+ +  QR+G GS  FKS +H  +G  ++  L++ +    L+GVV EI+HDPGR AP+ARV F +       ++L IA EG+  GQ +Y G  A + VGN LP+  IPEG  V N+E   GD G   RA G YA+++S  PD     V+LPSG  K     CRA IG VAGGGR EKPL+KAG AY+K++ +   WP  RGV MN V HP GG  H H G  +T  R APP +KVG IAA RTGR K
Sbjct:    1 MGKSLIQQRRGKGSPTFKSPSHRFRGAVKYIPLNYTQEKT-LRGVVEEIMHDPGRTAPVARVKFENGI-----EKLIIAPEGLLVGQEIYIGPDAPIAVGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREPDK--VIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_KORCO (50S ribosomal protein L2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.653e-55
Identity = 114/248 (45.97%), Postives = 155/248 (62.50%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGRLK 755
            MG+ I  QR+G G + F+S  H +  PA++        +  ++GV+ EI+H+PGR  P++ V   +      Q+  +I  EG+Y GQ +  GK A +  GNVLP+  IP+G++VCNVE   GD G +AR SG YA++ SH  + D   ++LPS  +K++ + CRA IG VAG GR EKP +KAG  Y+  R     WP VRGVAMNPV HPHGGG+H+  G  +T  R APP QKVG IAA +TGR K
Sbjct:    1 MGKRILVQRRGRGGIQFRSKDHLKIAPARYPQ---DGMDNLMRGVIKEILHEPGRHTPISLVELENG-----QEFYYIPPEGVYEGQEIQIGKGAEVKTGNVLPLSEIPDGSLVCNVEIRPGDGGKIARRSGTYAIVFSH--EGDKVILRLPSRKEKLVDARCRATIGVVAGSGRIEKPFMKAGIKYYHERTHPKRWPVVRGVAMNPVSHPHGGGSHKRPGKPTTVARTAPPGQKVGHIAARKTGRAK 238          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_PYRAB (50S ribosomal protein L2P OS=Pyrococcus abyssi GN=rpl2p PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.528e-54
Identity = 118/248 (47.58%), Postives = 154/248 (62.10%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGRLK 755
            MG+ +  QR+G GS  F+S +H  +G  ++  L++ + +  L+GVV EI+HDPGR AP+ARV F +       ++L IA EG+  GQ +Y G  A + +GN LP+  IPEG  V N+E   GD G   RA G YA+++S   + D   V+LPSG  K     CRA IG VAGGGR EKPL+KAG AY+K++ +   WP  RGV MN V HP GG  H H G  +T  R APP +KVG IAA RTGR K
Sbjct:    1 MGKSLIQQRRGKGSPTFRSPSHRFRGAVKYIPLNYTQ-DKTLRGVVEEIMHDPGRTAPVARVRFENGM-----EKLIIAPEGLLVGQEIYIGPDAPIAIGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPNCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNRFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHIAARRTGRRK 239          
BLAST of EY659711 vs. ExPASy Swiss-Prot
Match: RL2_META3 (50S ribosomal protein L2P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl2p PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.528e-54
Identity = 113/246 (45.93%), Postives = 150/246 (60.98%), Query Frame = 3
Query:   15 MGRVIRAQRKGAGSV-FKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTGRRDAPPDQKVGLIAAXRTGR 749
            MG+ +++Q +G G+  + S TH RKG  ++R  D  ER   + G + +I+HDPGR +P+ARV + +      ++ L +  EGM     + CG  A +  GNVLP+  +PEG  V N+E   GD G L R+ G YA +I+H  D   T +KLPSG  K +   CRA IG VAGGGR EKP+ KAG  YH  + K   WP+VRGVAMN V+HP GGGN QH G  +T  R   P +KVG IAA RTG+
Sbjct:    1 MGKRLQSQNRGKGTPRYTSPTHKRKGAVKYRKFDESERKDKIIGTIIDILHDPGRSSPIARVRYDNG-----EERLILIPEGMKIKDTIECGISAEIKPGNVLPLGEVPEGIPVYNIETIPGDGGKLVRSGGCYAHVITH--DVSKTIIKLPSGHMKTLNPMCRATIGVVAGGGRKEKPITKAGKKYHAMKAKAVLWPRVRGVAMNAVDHPFGGGNTQHAGKPTTISRHTSPGRKVGHIAARRTGK 239          
The following BLAST results are available for this feature:
BLAST of EY659711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_METVS5.443e-5747.1550S ribosomal protein L2P OS=Methanococcus vanniel... [more]
RL2_METTH7.108e-5748.3750S ribosomal protein L2P OS=Methanobacterium ther... [more]
RL2_METJA1.212e-5647.5650S ribosomal protein L2P OS=Methanocaldococcus ja... [more]
RL2_AERPE3.528e-5649.6050S ribosomal protein L2P OS=Aeropyrum pernix GN=r... [more]
RL2_DESK16.018e-5650.0050S ribosomal protein L2P OS=Desulfurococcus kamch... [more]
RL2_METVA1.026e-5546.7250S ribosomal protein L2P OS=Methanococcus vanniel... [more]
RL2_PYRFU2.987e-5548.7950S ribosomal protein L2P OS=Pyrococcus furiosus G... [more]
RL2_KORCO6.653e-5545.9750S ribosomal protein L2P OS=Korarchaeum cryptofil... [more]
RL2_PYRAB2.528e-5447.5850S ribosomal protein L2P OS=Pyrococcus abyssi GN=... [more]
RL2_META32.528e-5445.9350S ribosomal protein L2P OS=Methanococcus aeolicu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-C04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659711 ID=EY659711; Name=EY659711; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGGAAATGGGTCGTGTGATTCGCGCACAGCGTAAGGGTGCA
GGTTCGGTCTTCAAGTCCCACACCCACCACCGTAAGGGTCCGGCCCAGTT
CCGCAGCCTCGACTTCGGTGAGCGTAATGGTTACCTCAAGGGTGTCGTCG
CAGAGATTATTCACGATCCGGGTCGTGGTGCCCCGCTGGCCCGAGTTACC
TTTCGTCACCCTTTTCGCTACATGAAACAAAAGGAGCTTTTCATTGCCGC
CGAGGGTATGTACACGGGTCAGTTCGTGTACTGCGGCAAGAAAGCCACTC
TGATGGTTGGTAATGTGTTGCCCGTTAGATCTATCCCTGAAGGAGCTGTC
GTTTGCAACGTTGAGCATCATGTTGGTGATCGCGGTGTTCTCGCTAGAGC
TTCTGGTGATTATGCCGTTATCATCAGTCATAACCCCGATAATGACACCA
CCAGGGTCAAGCTTCCATCTGGTGCCAAAAAGATTATTCCAAGTGGCTGC
AGAGCTATGATTGGGCAGGTTGCCGGCGGAGGGAGGACTGAGAAGCCCCT
TCTCAAAGCTGGTAATGCATACCACAAATTCAGAGTGAAGCGAAACTGCT
GGCCTAAGGTGCGTGGTGTGGCCATGAACCCAGTGGAGCATCCTCATGGA
GGAGGTAACCACCAGCACATTGGTCATGCTAGCACTGGTAGGCGTGATGC
TCCCCCTGACCAGAAGGTTGGTCTTATTGCAGCCAGNAGGACTGGTCGGC
TCAAAGGACAGCTGCTGCCACTGCAGCCAGGNNCGACAGCTTNAATCCNT
TGTGGTACACAATCGTCTCTCTATCGGATCTGTCATTTACTTTCCTGCTG
CATCATACTTGGAAAATTTGTCAGATTTGATCTCGGGATGATCTGATGGT
AAATTGNTGGCTTAAGTT
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