EY659702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_XANCB (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=glyA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 116/260 (44.62%), Postives = 160/260 (61.54%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF----FDAAVKLAVKIKSENSGTKLKNSWP 770 +PK+++AG SAY++ D+ R R + + A + DMAH++GLVAAGV PSP ++A VVT+TTHK+LRGPRG +I KG E D +K+ VFPG+QGGP H I AVA K+A PE+K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D +A + DA AV K ++ T +P Sbjct: 166 KPKMVIAGFSAYSQKIDWARFRAIADSVGAYLFVDMAHVAGLVAAGVYPSPMDHAHVVTSTTHKTLRGPRGGIIL-AKGAGE----------DLVKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDCVDLANWIADVLDAPADDAVLAKVRDAVTAQCKKYP 414
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_XANC8 (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glyA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 116/260 (44.62%), Postives = 160/260 (61.54%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF----FDAAVKLAVKIKSENSGTKLKNSWP 770 +PK+++AG SAY++ D+ R R + + A + DMAH++GLVAAGV PSP ++A VVT+TTHK+LRGPRG +I KG E D +K+ VFPG+QGGP H I AVA K+A PE+K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D +A + DA AV K ++ T +P Sbjct: 166 KPKMVIAGFSAYSQKIDWARFRAIADSVGAYLFVDMAHVAGLVAAGVYPSPMDHAHVVTSTTHKTLRGPRGGIIL-AKGAGE----------DLVKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDCVDLANWIADVLDAPADDAVLAKVRDAVTAQCKKYP 414
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_XANC5 (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=glyA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 116/260 (44.62%), Postives = 159/260 (61.15%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF----FDAAVKLAVKIKSENSGTKLKNSWP 770 +PK++VAG SAY++ D+ R R + + A + DMAHI+GLVAAGV PSP E+A VVT+TTHK+LRGPRG +I + +E+ K K+ VFPG+QGGP H I AVA K+A P +K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D +A + DA AV K ++ T +P Sbjct: 166 KPKMVVAGFSAYSQKIDWARFRAIADSVGAYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIVAKGASEELQK-----------KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDSIDLANWIADVLDAPTDEAVLAKVRDAVTAQCKRYP 414
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_XANAC (Serine hydroxymethyltransferase OS=Xanthomonas axonopodis pv. citri GN=glyA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 116/260 (44.62%), Postives = 159/260 (61.15%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF----FDAAVKLAVKIKSENSGTKLKNSWP 770 +PK++VAG SAY++ D+ R R + + A + DMAHI+GLVAAGV PSP E+A VVT+TTHK+LRGPRG +I + +E+ K K+ VFPG+QGGP H I AVA K+A P +K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D +A + DA AV K ++ T +P Sbjct: 166 KPKMVVAGFSAYSQKIDWARFRAIADSVGAYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIVAKGASEELQK-----------KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDSIDLANWIADVLDAPTDEAVLAKVRDAVTAQCKRYP 414
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_THESQ (Serine hydroxymethyltransferase OS=Thermotoga sp. (strain RQ2) GN=glyA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 112/250 (44.80%), Postives = 154/250 (61.60%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTK 752 +PK+IVAG SAYAR+ D++R R++ ++ A ++ DMAH +GLVAAG+ P+P EYA VVT+TTHK+LRGPRG +I D + +++ +FPG+QGGP H I AV K+A T E+K YQ QV+ N K A+ + GY +VSGGT+ HL LV+L K I G EK LE+ I NKNT+P + S V GIR+GTPA+T+RG EE+ ++A D + + EN K Sbjct: 164 KPKIIVAGGSAYARIIDFKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPLEYAHVVTSTTHKTLRGPRGGLILTNDP-------------DIAKAVDKTIFPGIQGGPLMHVIAAKAVCFKEAMTEEFKEYQNQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMIDLVLS---NVTDENGTVK 397
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_SYNWW (Serine hydroxymethyltransferase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=glyA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 107/229 (46.72%), Postives = 157/229 (68.56%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 RP++IVAGASAY R+ D+++ R++ ++ A++ DMAHI+GLVAAG+ PSP YAD V++TTHK+LRGPRG I R+ ++ KI++AVFPG+QGGP H I AV K+A TPE+KAYQ+ +++N + A+ L+E G +VSGGT+NHL+LV+++ K ++G E +LE+++I NKN +P D V GIR+GTPA+TSR +D ++A Sbjct: 167 RPQMIVAGASAYPRILDFKKFREIADEAGALLFVDMAHIAGLVAAGLHPSPVPYADFVSSTTHKTLRGPRGGFILCRQ--------------EWANKIDKAVFPGIQGGPLMHVIAAKAVCFKEALTPEFKAYQQDIVNNAAILAKALMEQGLRVVSGGTDNHLMLVDVRPKGLNGRDAEAILESINITVNKNAIPFDPEKPTVTSGIRVGTPAVTSRALKGDDMRELA 381
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAES (Serine hydroxymethyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=glyA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 116/264 (43.94%), Postives = 168/264 (63.64%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTKLKNSWPQHSPLTS 791 +PKLIVAGASAY+R D+++ +++ ++ A ++ DMAHI+GLVAAG+ P+P EYAD VTTTTHK+LRGPRG MI ++ +Y++ I++ +FPG+QGGP H I AVA +A ++K YQ QV+ N AQTL+E G+ +VSGGT+NHLV V++K + G E+ L+ V I NKNT+P D V G+R+GTPA T+RGF E F +VA +++ + + ++ TKL + + LTS Sbjct: 163 QPKLIVAGASAYSRTIDFKKFKEIADEVGAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKE--------------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALNDDFKDYQNQVIKNAQALAQTLIEEGFRVVSGGTDNHLVAVDVKGSINMTGKLAEETLDKVGITCNKNTIPFDKEKPFVTSGVRLGTPAATTRGFDESAFVEVAKI------ISLALNNYDNDTKLNEAKERVHALTS 406
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAEQ (Serine hydroxymethyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=glyA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 116/264 (43.94%), Postives = 168/264 (63.64%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTKLKNSWPQHSPLTS 791 +PKLIVAGASAY+R D+++ +++ ++ A ++ DMAHI+GLVAAG+ P+P EYAD VTTTTHK+LRGPRG MI ++ +Y++ I++ +FPG+QGGP H I AVA +A ++K YQ QV+ N AQTL+E G+ +VSGGT+NHLV V++K + G E+ L+ V I NKNT+P D V G+R+GTPA T+RGF E F +VA +++ + + ++ TKL + + LTS Sbjct: 163 QPKLIVAGASAYSRTIDFKKFKEIADEVGAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKE--------------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALNDDFKDYQNQVIKNAQALAQTLIEEGFRVVSGGTDNHLVAVDVKGSINMTGKLAEETLDKVGITCNKNTIPFDKEKPFVTSGVRLGTPAATTRGFDESAFVEVAKI------ISLALNNYDNDTKLNEAKERVHALTS 406
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_DESDG (Serine hydroxymethyltransferase OS=Desulfovibrio desulfuricans (strain G20) GN=glyA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 114/229 (49.78%), Postives = 151/229 (65.94%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 RP +IVAGASAY+R+ D+ R R + ++ ++++ DMAHI+GLVAAG+ PSP A TTTTHK+LRGPRG MI + + +K+N +FPG+QGGP H I AVA +A PE+ AYQ+QV++N +K A TL + G+ELVSGGT+NHL+LV+L NK I G + L+ I ANKNTVP + S V GIR+GTPALT+RG E + KVA Sbjct: 163 RPAMIVAGASAYSRIIDFARFRAIADEVGSLLMVDMAHIAGLVAAGLHPSPVGTAHFTTTTTHKTLRGPRGGMILSDE--------------EAAKKLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPEFGAYQKQVVANAAKLAATLTDAGFELVSGGTDNHLMLVDLTNKDITGKDAQHALDLAGITANKNTVPFETRSPFVTSGIRLGTPALTTRGMKEAEMVKVA 377
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA2_PSEPK (Serine hydroxymethyltransferase 2 OS=Pseudomonas putida (strain KT2440) GN=glyA2 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.667e-55 Identity = 109/229 (47.60%), Postives = 147/229 (64.19%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 +PK+IVAG SAY+++ D+ R R + +K A + DMAH++GLVAAGV P+P +ADVVTTTTHK+LRGPRG +I R D E+K+N AVFPG QGGP H I A+ K+A PE+KAYQ+QV+ N A +E G+++VSGGT+NHL L++L + I G + L I NKN+VP D S V G+R GTPA+T+RGF E + ++A Sbjct: 166 KPKMIVAGFSAYSQVLDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLILARANA------------DIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMASVFIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSGLRFGTPAVTTRGFKEAECKELA 382 The following BLAST results are available for this feature:
BLAST of EY659702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659702 ID=EY659702; Name=EY659702; organism=Citrus sinensis; type=EST; length=892bpback to top |