EY659702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSM (Serine hydroxymethyltransferase OS=Geobacter sp. (strain M21) GN=glyA PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55 Identity = 109/231 (47.19%), Postives = 149/231 (64.50%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 695 +PK+IV GASAY R+ D+E R++ +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ ++ + +N +FPG+QGGP H I AVA K+A TPE+K YQEQ++ N A+ L + G++L SGGT+NHL+LV+L + G E+ L+ I NKN +P D S + GIR+GTPA TS G E + +VA F Sbjct: 163 KPKMIVVGASAYPRIIDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIMCRE--------------EWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALTPEFKKYQEQIVKNAKALAEGLTKRGFKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGTPAATSHGLKEAEMEQVAGF 379
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_GEOMG (Serine hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55 Identity = 112/236 (47.46%), Postives = 148/236 (62.71%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 710 +PKLIV GASAY R+ D+ R + +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ ++ + +N +FPG+QGGP H I AVA K+A PE+K YQEQ++ N A L++ G+ LVSGGT+NHL+LVNL + G E+ L+ I NKNTVP + S V G R+GTPA TS G E + +VA F A+ Sbjct: 163 KPKLIVVGASAYPRVLDFAAFRAIADKVGALVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCRE--------------EFAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALAPEFKLYQEQIVKNARTLADELMKRGFRLVSGGTDNHLMLVNLTGTELTGKVAEEALDKAGITVNKNTVPFETRSPFVTSGFRIGTPAATSHGLKEAEMVEVAAFIAEAL 384
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_DICNV (Serine hydroxymethyltransferase OS=Dichelobacter nodosus (strain VCS1703A) GN=glyA PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55 Identity = 108/229 (47.16%), Postives = 149/229 (65.07%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 RPK+I+AG SAY+++ D++R R++ + A ++ DMAH++GLVAAG+ P+P +ADVVT+TTHK+LRGPRG +I + E+K+N A+FPG QGGP H I AVA K+A P ++ YQEQV+ N A+ + GY++VSGGT+NHL+LV+L NK + G L HI NKN+VP D S V GIR+GTPA+T+RGF + KVA Sbjct: 166 RPKMIIAGFSAYSQVLDFQRFREIADSVGAYLMVDMAHVAGLVAAGLYPNPVPFADVVTSTTHKTLRGPRGGIILAKANPT------------IEKKLNSAIFPGSQGGPLMHVIAAKAVAFKEALEPSFQKYQEQVVENAKTMAKVFIARGYDIVSGGTQNHLMLVSLINKGLTGKAANDALSRAHITVNKNSVPNDPQSPFVTSGIRIGTPAITTRGFGVNEVKKVA 382
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_BAUCH (Serine hydroxymethyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=glyA PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55 Identity = 111/229 (48.47%), Postives = 148/229 (64.63%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 +PK+I+ G SAY+R+ D++ +R+V + KA + DMAHI+GLVAAGV P+P YADVVTTTTHK+L GPRG +I + G KE+ K K++ AVFPG QGGP H I G A+ALK+A PE+K YQ QV+ N L + +VSGGT+NHL L++L +K I G + L +I NKN +P D S+ V GIR+GTPA+T RGF E D ++A Sbjct: 166 KPKMIIGGFSAYSRVVDWDIMRQVADSIKAFLFVDMAHIAGLVAAGVYPNPVPYADVVTTTTHKTLAGPRGGLILAQGGSKEMYK-----------KLDSAVFPGAQGGPLMHVIAGKAIALKEAMEPEFKIYQHQVVKNAKTMVNVFLNRNFNVVSGGTDNHLFLLDLVDKNITGQEADAALSYTNITVNKNIIPNDPQSSFVTSGIRIGTPAITRRGFNETDAYQLA 383
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA3_PSEPF (Serine hydroxymethyltransferase 3 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA3 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55 Identity = 109/220 (49.55%), Postives = 147/220 (66.82%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGF 662 +PK+IVAG SAY++ D+ R R++ +K A++ DMAH++GLVAAG+ P+P YADVVTTTTHK+LRGPRG +I + K +E+ E+K+N AVFPG QGGP H I G AV K+A P +KAYQ+QV+ N A ++ GY++VSGGT+NHL LV+L + + G + L HI NKN VP D S V G+R+GTPA+T+RGF Sbjct: 167 KPKMIVAGFSAYSKTLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI--------LAKANEEI----EKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMASVFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTSGLRIGTPAVTTRGF 374
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA2_PSEPF (Serine hydroxymethyltransferase 2 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA2 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55 Identity = 109/229 (47.60%), Postives = 147/229 (64.19%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 +PK+IVAG SAY+++ D+ R R + +K A + DMAH++GLVAAGV P+P +ADVVTTTTHK+LRGPRG +I + D E+K+N AVFPG QGGP H I A+ K+A PE+KAYQ+QV+ N A +E G+++VSGGTENHL L++L + I G + L I NKN+VP D S V G+R GTPA+T+RGF E + ++A Sbjct: 166 KPKMIVAGFSAYSQILDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLILAKANA------------DIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMAGVFIERGFDVVSGGTENHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSGLRFGTPAVTTRGFKEAECKELA 382
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEF5 (Serine hydroxymethyltransferase 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=glyA1 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 2.178e-55 Identity = 109/229 (47.60%), Postives = 148/229 (64.63%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 +PK+IVAG SAY+++ D+ R R++ +K A + DMAH++GLVAAGV P+P +ADVVTTTTHK+LRGPRG +I R D E+K+N AVFPG QGGP H I A+ K+A PE+KAYQEQV+ N A+ + G+++VSGGT+NHL L++L + I G + L I NKN+VP D S V G+R GTPA+T+RGF E + ++A Sbjct: 166 KPKMIVAGFSAYSQILDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLILARANA------------DIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQEQVVKNAQAMAEVFIARGFDVVSGGTKNHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSGLRFGTPAVTTRGFKEAECKELA 382
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_LEPCP (Serine hydroxymethyltransferase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glyA PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.844e-55 Identity = 112/223 (50.22%), Postives = 145/223 (65.02%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEE 671 +PKLI+AGASA+A D+ER KV A + DMAH +GL+AAGV P+P +ADVVTTTTHK+LRGPRG +I V + +IN A+FPG+QGGP H I G AVA ++A PE+KAYQEQV+ N + A+TL G +VSG TE+H++LV+L+ K I G E +L HI NKN +P D MV GIR+G+PA+T+RGF EE Sbjct: 167 KPKLIIAGASAFALRIDFERFAKVAKAVGAYFMVDMAHYAGLIAAGVYPNPVPFADVVTTTTHKTLRGPRGGLILMTDAVAK--------------QINSAIFPGIQGGPLMHVIAGKAVAFQEALQPEFKAYQEQVVKNATAMAETLTARGLRIVSGRTESHVMLVDLRPKGITGKEAEALLGRAHITCNKNGIPNDPQKPMVTSGIRLGSPAMTTRGFKEE 375
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_THETN (Serine hydroxymethyltransferase OS=Thermoanaerobacter tengcongensis GN=glyA PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.715e-55 Identity = 114/252 (45.24%), Postives = 161/252 (63.89%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTKLK 758 +PKLIVAGASAY R+ D+++ R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I ++ ++ + I++A+FPG QGGP H I AV K+A + E+K YQ++++ N A L+E G LVSGGT+NHL+L++L+N I G +E L+ V+I NKN +P D + V G+R+GTPA+T+RG ED ++A +A IK EN K K Sbjct: 165 KPKLIVAGASAYPRIIDFKKFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCKQ--------------EHAKAIDKALFPGTQGGPLMHIIAAKAVCFKEALSDEFKEYQKRIVENAKALANALMERGINLVSGGTDNHLMLLDLRNTGITGKELETRLDEVNITCNKNAIPFDPLGPNVTSGVRLGTPAVTTRGMKPEDMVEIADI------IANMIKDENYKEKAK 396
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOP1 (Serine hydroxymethyltransferase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.715e-55 Identity = 107/237 (45.15%), Postives = 157/237 (66.24%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 +PKLIVAGASAY+R+ D++ +R++ ++ A ++ D+AHI+GLVA G+ PSP YAD VT+TTHK+LRGPRG +I ++ + + +++ +FPG+QGGP H I AV K+A P +K Y EQV+ N A+ L G++LVS GT+NHL+LV+L NK I G E +L+++ I NKNTVP + S V G+R+GTPA+T+RGF EE+ ++A + A+K Sbjct: 165 KPKLIVAGASAYSRIIDFKTLREIADEVGAYLMVDIAHIAGLVATGLHPSPVPYADFVTSTTHKTLRGPRGGLILCKE--------------KFAKALDKNIFPGIQGGPLMHIIAAKAVCFKEALEPSFKTYMEQVVKNAHVLAEALESYGFKLVSNGTDNHLILVDLTNKDITGKDAEILLDSIGITLNKNTVPNETRSPFVTSGVRIGTPAITTRGFKEEEMKEIASIINDAIK 387 The following BLAST results are available for this feature:
BLAST of EY659702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659702 ID=EY659702; Name=EY659702; organism=Citrus sinensis; type=EST; length=892bpback to top |