EY659702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBB (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glyA PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.715e-55 Identity = 106/229 (46.29%), Postives = 153/229 (66.81%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 +PKLIVAGASAY+R+ D+++ R++C++ A ++ DMAHI+GLVAA + PSP YAD VT+TTHK+LRGPRG +I ++ Y + +++ +FPG+QGGP H I AV K+A P +K Y +V+ NC + + L++ G++LVS GT+NHL+LV+L NK I G EK+L+ V I NKNTVP + S V G+R+GT A+T+RGF D ++A Sbjct: 165 KPKLIVAGASAYSRIIDFKKFREICDEIGAYLMVDMAHIAGLVAAELHPSPVPYADFVTSTTHKTLRGPRGGLILCKE--------------KYAKDLDKNIFPGMQGGPLMHIIAAKAVCFKEALDPSFKEYMARVVENCKELGEQLVKRGFKLVSNGTDNHLILVDLNNKDITGKDAEKLLDEVGITLNKNTVPNETRSPFVTSGVRIGTAAITTRGFERRDMEEIA 379
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_ALKMQ (Serine hydroxymethyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glyA PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.715e-55 Identity = 110/229 (48.03%), Postives = 151/229 (65.94%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 +PK+IVAGASAY R D+++ R++ + A ++ DMAHI+GLVA G+ +P EYAD VTTTTHK+LRGPRG I ++ Y + I++A+FPGLQGGP H I AVA K+A P +KAYQEQV+ N + L + G++LVS GT+ HL+L++L+NK I G E++ + V I NKNT+P D S V GIR+GTPA+T+RG EE+ K+A Sbjct: 165 KPKMIVAGASAYPRAIDFKKFREIADAVGAYLMVDMAHIAGLVAVGLHQNPCEYADFVTTTTHKTLRGPRGGAILCKE--------------KYAKIIDKAIFPGLQGGPLMHVIAAKAVAFKEALEPGFKAYQEQVIKNAKALGEELKKQGFDLVSDGTDTHLLLIDLRNKNITGKDAERLFDEVGITVNKNTIPFDPQSPFVTSGIRIGTPAVTTRGMKEEEMKKIA 379
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_ACIRA (Serine hydroxymethyltransferase OS=Acinetobacter radioresistens GN=glyA PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.715e-55 Identity = 117/253 (46.25%), Postives = 160/253 (63.24%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF--------DAAVKLAVKIKSE 737 +P++IVAG SAY+++ D++R R + +K A + DMAH++GLVAAGV P+P + ADV TTTTHK+LRGPR +I + K +E+ E+K+ AVFPG QGGP H + A+ K+A PEYKAYQ+QV+ N A+ L+E GY++VSGGT+NHL L++L + I G + L A HI NKN+VP D S V GIR+GTPA+T+RGF E + +A + D AV VK K E Sbjct: 166 KPRMIVAGFSAYSQIVDWQRFRDIADKIGAYLFVDMAHVAGLVAAGVYPNPVQIADVTTTTTHKTLRGPRSGLI--------LAKANEEI----EKKLQSAVFPGNQGGPLVHAVAAKAICFKEAMAPEYKAYQQQVVKNAQAMAEVLIERGYDVVSGGTKNHLFLLSLIKQDITGKDADAWLGAAHITVNKNSVPNDPRSPFVTSGIRIGTPAVTTRGFGEAEVRDLASWIADILDSKGDEAVINTVKAKVE 406
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_THEMA (Serine hydroxymethyltransferase OS=Thermotoga maritima GN=glyA PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.852e-55 Identity = 111/233 (47.64%), Postives = 151/233 (64.81%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 701 +PK+IVAG SAYAR+ D++R R++ ++ A ++ DMAH +GLVAAG+ P+P EYA VVT+TTHK+LRGPRG +I EI K +++ +FPG+QGGP H I AV K+A T E+K YQ+QV+ N K A+ + GY +VSGGT+ HL LV+L K I G EK LE+ I NKNT+P + S V GIR+GTPA+T+RG EE+ ++A D Sbjct: 164 KPKIIVAGGSAYARIIDFKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPLEYAHVVTSTTHKTLRGPRGGLILTND--PEIAKA-----------VDKTIFPGIQGGPLMHVIAAKAVCFKEAMTEEFKEYQKQVVKNAKKMAEEFQKRGYRIVSGGTDTHLFLVDLTPKDITGKAAEKALESCGITVNKNTIPNEKRSPFVASGIRIGTPAVTTRGMKEEEMEEIAEMID 383
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_GLUOX (Serine hydroxymethyltransferase OS=Gluconobacter oxydans GN=glyA PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.852e-55 Identity = 109/241 (45.23%), Postives = 155/241 (64.32%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVK 725 +PK+IVAG+SAY R+ D+ R RK+ ++ A ++ DMAH +GLVAAG+ P+P AD+ T+TTHK+LRGPRG +I D +K+N AVFPGLQGGP H I G AVA +A + E+KAYQ++VL+N A L G+++V+GGT++HL+LV+L+ K++ G E +LE I ANKN +P D V GIR+G+PA T+RGF E +F +V D + A++ Sbjct: 177 KPKIIVAGSSAYPRVIDFARFRKIADEVGAYLMVDMAHFAGLVAAGLYPNPVPMADITTSTTHKTLRGPRGGIILTNNP-------------DLAKKVNSAVFPGLQGGPLMHVIAGKAVAFGEALSDEFKAYQKRVLANARALADELQNRGFDIVTGGTDSHLILVDLRPKKVTGKLAEAILERAGITANKNAIPFDPEKPFVTSGIRLGSPAATARGFGEAEFREVGRMIDEVLTAALE 404
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSL (Serine hydroxymethyltransferase OS=Geobacter sulfurreducens GN=glyA PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.852e-55 Identity = 113/236 (47.88%), Postives = 148/236 (62.71%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 710 +PK+IV GASAY R D+ R + +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ +Y + +N +FPG+QGGP H I AVALK+A PE+KAYQ Q++ N A L++ G+ LVSGGT+NHL+LVNL + G E+ L+ I NKNTVP + S V G R+GTPA T+ G E + A VA F A+ Sbjct: 163 KPKMIVVGASAYPRTIDFAAFRIIADKVGAVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCRE--------------EYAKTLNSNIFPGIQGGPLMHVIAAKAVALKEALQPEFKAYQAQIVKNAKALADELVKRGFRLVSGGTDNHLMLVNLTGTELTGKVAEESLDKAGITVNKNTVPFETRSPFVTSGFRIGTPAATTHGLKEAEMADVAGFIAEAL 384
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_GEOBB (Serine hydroxymethyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=glyA PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.852e-55 Identity = 109/231 (47.19%), Postives = 148/231 (64.07%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 695 +PK+IV GASAY R+ D+E R++ +K A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ D+ + +N +FPG+QGGP H I AVA K+A TPE+K YQ Q++ N A+ L + G++L SGGT+NHL+LV+L + G E+ L+ I NKN +P D S + GIR+GTPA TS G E + +VA F Sbjct: 163 KPKMIVVGASAYPRIIDFEAFRRIADKVGAVVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMIMCRE--------------DWAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALTPEFKQYQGQIVKNAKALAEGLTKRGFKLTSGGTDNHLMLVDLSQTELTGKVAEEALDRAGITVNKNGIPFDTRSPFITSGIRIGTPAATSHGLKEAEMEQVAGF 379
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPS (Serine hydroxymethyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.852e-55 Identity = 107/237 (45.15%), Postives = 157/237 (66.24%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 +PKLIVAGASAY+R+ D++ +R++ ++ A ++ D+AHI+GLVA G+ PSP YAD VT+TTHK+LRGPRG +I ++ ++ +++ +FPG+QGGP H I AV K+A P +K Y EQV+ N A+ L G++LVS GT+NHL+LV+L NK I G E +L+++ I NKNTVP + S V G+R+GTPA+T+RGF EE+ ++A + A+K Sbjct: 165 KPKLIVAGASAYSRIIDFKTLREIADEVGAYLMVDIAHIAGLVATGLHPSPVPYADFVTSTTHKTLRGPRGGLILCKEKFAKV--------------LDKNIFPGIQGGPLMHIIAAKAVCFKEALEPSFKTYMEQVVKNAHVLAEALESYGFKLVSNGTDNHLILVDLTNKDITGKDAEILLDSIGITLNKNTVPNETRSPFVTSGVRIGTPAITTRGFKEEEMKEIASIINDAIK 387
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_VEREI (Serine hydroxymethyltransferase OS=Verminephrobacter eiseniae (strain EF01-2) GN=glyA PE=3 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 6.336e-55 Identity = 112/230 (48.70%), Postives = 146/230 (63.48%), Query Frame = 3 Query: 3 TRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 TRP+LI+AGASAY+ D+ R +V AI + DMAH +GL+AAG+ P+P +ADVVT+TTHKSLRGPRG +I R +E+ I+ A+FPGLQGGP H I AVA ++A P ++ YQEQVL N AQTL G +VSGGT++H++LV+L+ K I G E VL A H+ NKN +P D MV G+R+GTPA+T+RGF EE A Sbjct: 165 TRPRLIIAGASAYSLHIDFARFAQVAKDVGAIFMVDMAHYAGLIAAGLYPNPVPHADVVTSTTHKSLRGPRGGIILMRAA--------------HEKAIHSAIFPGLQGGPLMHVIAAKAVAFQEALQPGFRLYQEQVLKNAKVLAQTLAARGLRIVSGGTQSHMMLVDLRAKGITGKEAEAVLGAAHMTINKNAIPNDPEKPMVTSGVRIGTPAMTTRGFKEEQARSTA 380
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_SULNB (Serine hydroxymethyltransferase OS=Sulfurovum sp. (strain NBC37-1) GN=glyA PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 6.336e-55 Identity = 115/229 (50.22%), Postives = 147/229 (64.19%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 +PK+IV GASAYAR D+++ R++ ++ AI+ AD+AHI+GLV AG PSPF YADVVTTTTHK+L GPRG MI D +KIN A+FPGLQGGP H I AV K + E+K Y +QV +N S A L++ GY++VSGGT+NHLVLV+ +K G + L A I NKNTVPG+ S V GIR+G+PALTSRG E +F +A Sbjct: 163 QPKIIVCGASAYAREIDFKKFREIADEVGAILFADIAHIAGLVCAGEHPSPFPYADVVTTTTHKTLAGPRGGMIMTNDE-------------DIAKKINSAIFPGLQGGPLVHVIAAKAVGFKHNLSDEWKVYAKQVKANASILADVLIKRGYDVVSGGTDNHLVLVSFLDKEFSGKDADAALGAAGITVNKNTVPGETRSPFVTSGIRIGSPALTSRGMKEIEFEIIA 378 The following BLAST results are available for this feature:
BLAST of EY659702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659702 ID=EY659702; Name=EY659702; organism=Citrus sinensis; type=EST; length=892bpback to top |