EY659702

Overview
NameEY659702
Unique NameEY659702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_XANOP (Serine hydroxymethyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 116/259 (44.79%), Postives = 156/259 (60.23%), Query Frame = 3 
Query:    9 PKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF----FDAAVKLAVKIKSENSGTKLKNSWP 770
            PK++VAG SAY++  D+ R R + +   A +  DMAHI+GLVAAGV PSP E+A VVT+TTHK+LRGPRG +I  +   +E+ K           K+   VFPG+QGGP  H I   AVA K+A  P +K YQ+QV+ N    A TL+  GY++VSGGTENHL+LV++  + + G   E  L   HI  NKN VP D  S  V  G+R+GTPA+T+RG+ E D   +A +     DA    AV  K  ++ T     +P
Sbjct:  167 PKMVVAGFSAYSQKIDWARFRAIADSVGAYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIVAKGASEELQK-----------KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNAVPNDPRSPFVTSGLRLGTPAITTRGYKEPDSIDLANWIADVLDAPTDEAVLAKVRDAVTAQCKRYP 414
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_XANOM (Serine hydroxymethyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 116/259 (44.79%), Postives = 156/259 (60.23%), Query Frame = 3 
Query:    9 PKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF----FDAAVKLAVKIKSENSGTKLKNSWP 770
            PK++VAG SAY++  D+ R R + +   A +  DMAHI+GLVAAGV PSP E+A VVT+TTHK+LRGPRG +I  +   +E+ K           K+   VFPG+QGGP  H I   AVA K+A  P +K YQ+QV+ N    A TL+  GY++VSGGTENHL+LV++  + + G   E  L   HI  NKN VP D  S  V  G+R+GTPA+T+RG+ E D   +A +     DA    AV  K  ++ T     +P
Sbjct:  167 PKMVVAGFSAYSQKIDWARFRAIADSVGAYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIVAKGASEELQK-----------KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNAVPNDPRSPFVTSGLRLGTPAITTRGYKEPDSIDLANWIADVLDAPTDEAVLAKVRDAVTAQCKRYP 414
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_THEM4 (Serine hydroxymethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 109/245 (44.49%), Postives = 157/245 (64.08%), Query Frame = 3 
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE 737
            +PK+I+AG SAY+++ D++R R++ ++  A ++ DMAH +GLVAAG+ P+P EYA +VT+TTHK+LRGPRG MI             KE++    + IN+++FPG+QGGP  H I   AV  K+A T E+KAYQ QV+ N  K A+ L + G  +VSGGT+ HL+LV+L    + G   E  L   H+  NKNT+P +  S  V  GIR+GTPALT+RG  E +  ++A   +  VK+   +K E
Sbjct:  164 KPKIIIAGGSAYSKIIDFKRFREIADEVGAYLIVDMAHFAGLVAAGIYPNPAEYAHIVTSTTHKTLRGPRGGMIL---------TNDKELY----KAINKSIFPGIQGGPLMHVIAAKAVCFKEALTDEFKAYQNQVVKNAKKLAEELEKRGLRIVSGGTDTHLMLVDLNPLNVTGKAAEIALGKCHVTVNKNTIPNETRSPFVASGIRLGTPALTTRGMKESEMEEIA---ELIVKVLENVKDE 392
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAS1 (Serine hydroxymethyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 115/262 (43.89%), Postives = 162/262 (61.83%), Query Frame = 3 
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTKLKNSWPQHSPL 785
            +PKLIVAGASAY+R  D++R +++ ++  A ++ DMAHI+GLVA G+ P+P EYAD VTTTTHK+LRGPRG MI  ++              +Y+++I++ +FPG+Q GP  H I   AVA  +A   ++K YQ+QV+ N    A TL + G+ +VSGGT+NHLV V++K    I G   E+ L+A+ I  NKNT+P D     V  GIR+GTPA T+RGF E  F +VA      +K     K+   G +  N+     PL
Sbjct:  163 KPKLIVAGASAYSRTIDFKRFKEIADEVGAKLMVDMAHIAGLVAVGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKE--------------EYKKQIDKTIFPGIQSGPLEHVIAAKAVAFGEALQDDFKVYQQQVIQNAKTLANTLTDEGFRVVSGGTDNHLVAVDVKGSVGITGKVAEETLDAIGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDETAFEEVAKIISLVLKDPENEKALAEGKERVNTLTSKHPL 410
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAAW (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MW2) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 110/238 (46.22%), Postives = 156/238 (65.55%), Query Frame = 3 
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713
            +PKLIVAGASAY+R  D+++ +++ ++  A ++ DMAHI+GLVAAG+ P+P EYAD VTTTTHK+LRGPRG MI  ++              +Y++ I++ +FPG+QGGP  H I   AVA  +A    +K YQ+QV+ N    A+ L+  G+ +VSGGT+NHLV V++K    + G   E+ L++V I  NKNT+P D     V  GIR+GTPA T+RGF E+ F +VA     A+K
Sbjct:  163 KPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKE--------------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALK 386
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAAT (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 110/238 (46.22%), Postives = 156/238 (65.55%), Query Frame = 3 
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713
            +PKLIVAGASAY+R  D+++ +++ ++  A ++ DMAHI+GLVAAG+ P+P EYAD VTTTTHK+LRGPRG MI  ++              +Y++ I++ +FPG+QGGP  H I   AVA  +A    +K YQ+QV+ N    A+ L+  G+ +VSGGT+NHLV V++K    + G   E+ L++V I  NKNT+P D     V  GIR+GTPA T+RGF E+ F +VA     A+K
Sbjct:  163 KPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKE--------------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALK 386
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAAS (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 110/238 (46.22%), Postives = 156/238 (65.55%), Query Frame = 3 
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713
            +PKLIVAGASAY+R  D+++ +++ ++  A ++ DMAHI+GLVAAG+ P+P EYAD VTTTTHK+LRGPRG MI  ++              +Y++ I++ +FPG+QGGP  H I   AVA  +A    +K YQ+QV+ N    A+ L+  G+ +VSGGT+NHLV V++K    + G   E+ L++V I  NKNT+P D     V  GIR+GTPA T+RGF E+ F +VA     A+K
Sbjct:  163 KPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKE--------------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALK 386
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAAR (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=glyA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 110/238 (46.22%), Postives = 156/238 (65.55%), Query Frame = 3 
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713
            +PKLIVAGASAY+R  D+++ +++ ++  A ++ DMAHI+GLVAAG+ P+P EYAD VTTTTHK+LRGPRG MI  ++              +Y++ I++ +FPG+QGGP  H I   AVA  +A    +K YQ+QV+ N    A+ L+  G+ +VSGGT+NHLV V++K    + G   E+ L++V I  NKNT+P D     V  GIR+GTPA T+RGF E+ F +VA     A+K
Sbjct:  163 KPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKE--------------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALK 386
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAAN (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain N315) GN=glyA PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 110/238 (46.22%), Postives = 156/238 (65.55%), Query Frame = 3 
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713
            +PKLIVAGASAY+R  D+++ +++ ++  A ++ DMAHI+GLVAAG+ P+P EYAD VTTTTHK+LRGPRG MI  ++              +Y++ I++ +FPG+QGGP  H I   AVA  +A    +K YQ+QV+ N    A+ L+  G+ +VSGGT+NHLV V++K    + G   E+ L++V I  NKNT+P D     V  GIR+GTPA T+RGF E+ F +VA     A+K
Sbjct:  163 KPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKE--------------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALK 386
[Close]
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_STAAM (Serine hydroxymethyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=glyA PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.276e-55
Identity = 110/238 (46.22%), Postives = 156/238 (65.55%), Query Frame = 3 
Query:    6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNK-RIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713
            +PKLIVAGASAY+R  D+++ +++ ++  A ++ DMAHI+GLVAAG+ P+P EYAD VTTTTHK+LRGPRG MI  ++              +Y++ I++ +FPG+QGGP  H I   AVA  +A    +K YQ+QV+ N    A+ L+  G+ +VSGGT+NHLV V++K    + G   E+ L++V I  NKNT+P D     V  GIR+GTPA T+RGF E+ F +VA     A+K
Sbjct:  163 KPKLIVAGASAYSRTIDFKKFKEIADEVNAKLMVDMAHIAGLVAAGLHPNPVEYADFVTTTTHKTLRGPRGGMILCKE--------------EYKKDIDKTIFPGIQGGPLEHVIAAKAVAFGEALENNFKTYQQQVVKNAKVLAEALINEGFRIVSGGTDNHLVAVDVKGSIGLTGKEAEETLDSVGITCNKNTIPFDQEKPFVTSGIRLGTPAATTRGFDEKAFEEVAKIISLALK 386
The following BLAST results are available for this feature:
BLAST of EY659702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYA_XANOP8.276e-5544.79Serine hydroxymethyltransferase OS=Xanthomonas ory... [more]
GLYA_XANOM8.276e-5544.79Serine hydroxymethyltransferase OS=Xanthomonas ory... [more]
GLYA_THEM48.276e-5544.49Serine hydroxymethyltransferase OS=Thermosipho mel... [more]
GLYA_STAS18.276e-5543.89Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAW8.276e-5546.22Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAT8.276e-5546.22Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAS8.276e-5546.22Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAR8.276e-5546.22Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAN8.276e-5546.22Serine hydroxymethyltransferase OS=Staphylococcus ... [more]
GLYA_STAAM8.276e-5546.22Serine hydroxymethyltransferase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659702 ID=EY659702; Name=EY659702; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGAAATTGATTGTTGCTGGTGCTAGTGCTTATGCACGATTG
TACGATTATGAGCGTATTCGCAAGGTTTGCAACAAACAAAAAGCTATAAT
GTTGGCAGATATGGCACACATTAGTGGTTTGGTTGCTGCTGGTGTCATCC
CTTCACCTTTTGAGTATGCAGATGTTGTGACCACCACAACTCACAAATCA
CTTCGTGGGCCACGTGGAGCCATGATTTTCTTTAGGAAGGGAGTGAAAGA
GATTAACAAACAAGGGAAGGAGGTGTTTTATGATTATGAAGAAAAAATAA
ATCAAGCTGTCTTTCCTGGACTCCAAGGTGGCCCACACAACCACACAATT
ACTGGTTTAGCAGTTGCCTTGAAACAGGCCACTACTCCAGAGTATAAAGC
CTATCAAGAGCAAGTTCTGAGCAATTGCTCGAAATTTGCACAGACTCTGC
TCGAGATGGGCTATGAACTTGTTTCTGGTGGAACTGAGAACCATCTAGTG
TTGGTGAATTTGAAAAACAAGAGAATTGATGGTTCCAGAGTTGAAAAAGT
GTTGGAAGCTGTTCATATTGCAGCCAACAAAAACACTGTTCCTGGGGATG
TGTCAGCCATGGTTCCAGGTGGCATCAGGATGGGAACTCCGGCTCTTACT
TCTAGGGGATTTGTTGAGGAGGATTTTGCCAAGGTAGCATATTTCTTTGA
TGCTGCTGTGAAGTTGGCTGTGAAGATCAAGTCTGAAAACTCAGGAACAA
AGTTGAAGAATTCGTGGCCACAACACAGTCCGCTTACTTCAATCCGAGAT
TGCGAACTTCGCCATGATGTGANGAGTATGCAAACAGTCCCCACATTGGG
TTTGAAAAGAAACCATGAGTACAGACTGAGAGAAAACGCACT
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