EY659702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 6.527e-68 Identity = 127/243 (52.26%), Postives = 175/243 (72.02%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVF-YDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIK 731 +PKLI++GASAY R +DY+R+R + +K A ++ DMAH SGLVAA ++ SPF+Y DVVT+TTHK+LRGPR +IFFR+G K ++ GKE+ YD E KIN AVFP LQGGPH + I G+AVALK+A + E+K Y QV N + L+ GY+LV+ GT+NHL+L +L+ K + G++ EK + +I NKN V GD +A+ PGGIR+G+ ALTSRG E DF K+A F D V ++++I+ Sbjct: 177 KPKLIISGASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLRGPRSGIIFFRRG-KRVDGNGKEIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKEADSQEFKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIANITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQ 418
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CALS8 (Serine hydroxymethyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glyA PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.917e-61 Identity = 118/229 (51.53%), Postives = 162/229 (70.74%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 RPKLI+AGASAY R+ D+++ R++ ++ A ++ DMAHI+GLVAAG+ PSP EYAD VTTTTHK+LRGPRG +I ++ Y + I++++FPG+QGGP H I AVALK+A T E++ YQ Q+L N ++ L+E G+ LVSGGT+NHL+LV+L+NK I G EK L++++I NKN +P D S MV GIR+GTPA+T+RGF EED +VA Sbjct: 168 RPKLILAGASAYPRIIDFKKFREIADEVGAYLMVDMAHIAGLVAAGLHPSPVEYADFVTTTTHKTLRGPRGGLILCKE--------------KYAKLIDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFRNYQIQILKNAKALSERLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKRLDSLNITCNKNAIPFDTQSPMVTSGIRLGTPAVTTRGFKEEDMIEVA 382
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOAB (Serine hydroxymethyltransferase OS=Clostridium acetobutylicum GN=glyA PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.728e-61 Identity = 116/237 (48.95%), Postives = 165/237 (69.62%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 +PK+IV+GASAY+R+ D+++IR++C++ A M+ DMAHI+GLVAAG+ PSP YAD VTTTTHK+LRGPRG IF ++ Y + I+++VFPG+QGGP H I G AV +A ++K Y +Q+++N FA L + G+ +VSGGT+NHL+LV+L NK I G E +L++V I ANKNT+P + S + GIRMGTP++T+RGF EE+ KVAYF + ++ Sbjct: 165 KPKMIVSGASAYSRIIDFKKIREICDEVGAYMMVDMAHIAGLVAAGLHPSPIPYADFVTTTTHKTLRGPRGGAIFCKE--------------KYAKDIDKSVFPGMQGGPLMHIIAGKAVCFGEALKDDFKDYAQQIVNNAKVFADELTKYGFRIVSGGTDNHLLLVDLTNKNITGKDAEHLLDSVGITANKNTIPFEKKSPFITSGIRMGTPSVTTRGFKEEEMKKVAYFINYVIE 387
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBL (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=glyA PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 1.318e-60 Identity = 113/237 (47.68%), Postives = 162/237 (68.35%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 RPK+IV+GASAY R+ D+E+IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG I ++ Y + +++A+FPG+QGGP HTI AV ++A +YK Y +QV+ N + L G+ L+SGGT+NHL+L++L NK I G EK+L++V I NKNT+P + +S + GIR+GTPA+T+RGF EE+ K+AYF + +++ Sbjct: 165 RPKMIVSGASAYPRIIDFEKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGGAILCKE--------------KYAKAVDKAIFPGIQGGPLMHTIAAKAVCFREALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBK (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=glyA PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.248e-60 Identity = 113/237 (47.68%), Postives = 161/237 (67.93%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 RPK+IV+GASAY R+ D+E+IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG I ++ Y + +++A+FPG+QGGP HTI AV +A +YK Y +QV+ N + L G+ L+SGGT+NHL+L++L NK I G EK+L++V I NKNT+P + +S + GIR+GTPA+T+RGF EE+ K+AYF + +++ Sbjct: 165 RPKMIVSGASAYPRIIDFEKIREICDEIDAYMMVDMAHIAGLVATGIHPSPVPYADFVTTTTHKTLRGPRGGAILCKE--------------KYAKAVDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_ANATD (Serine hydroxymethyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glyA PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 3.835e-60 Identity = 118/229 (51.53%), Postives = 159/229 (69.43%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 RPKLI+AGASAY R+ D+++ R++ ++ A ++ DMAHI+GLVAAG+ PSP EYAD VTTTTHK+LRGPRG +I ++ Y + I++++FPG+QGGP H I AVALK+A T E+K YQ Q+L N + L+E G+ LVSGGT+NHL+LV+L+NK I G EK+L+ +I NKN VP D S M+ GIR+GTPA+T+RGF E D +VA Sbjct: 166 RPKLILAGASAYPRVIDFKKFREIADEVGAYLMVDMAHIAGLVAAGLHPSPVEYADFVTTTTHKTLRGPRGGLILCKE--------------KYAKLIDKSIFPGIQGGPLEHVIAAKAVALKEAMTEEFKNYQVQILKNAKALSTRLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKILDEHNITCNKNAVPFDTQSPMITSGIRLGTPAVTTRGFKEGDMLEVA 380
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBM (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=glyA PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 8.544e-60 Identity = 112/237 (47.26%), Postives = 161/237 (67.93%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 RPK+IV+GASAY R+ D+++IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG I ++ Y + +++A+FPG+QGGP HTI AV +A +YK Y +QV+ N + L G+ L+SGGT+NHL+L++L NK I G EK+L++V I NKNT+P + +S + GIR+GTPA+T+RGF EE+ K+AYF + +++ Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGGAILCKE--------------KYAKAVDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBJ (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=glyA PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 8.544e-60 Identity = 112/237 (47.26%), Postives = 161/237 (67.93%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 RPK+IV+GASAY R+ D+++IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG I ++ Y + +++A+FPG+QGGP HTI AV +A +YK Y +QV+ N + L G+ L+SGGT+NHL+L++L NK I G EK+L++V I NKNT+P + +S + GIR+GTPA+T+RGF EE+ K+AYF + +++ Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGGAILCKE--------------KYAKAVDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBH (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 8.544e-60 Identity = 112/237 (47.26%), Postives = 161/237 (67.93%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 RPK+IV+GASAY R+ D+++IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG I ++ Y + +++A+FPG+QGGP HTI AV +A +YK Y +QV+ N + L G+ L+SGGT+NHL+L++L NK I G EK+L++V I NKNT+P + +S + GIR+GTPA+T+RGF EE+ K+AYF + +++ Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGGAILCKE--------------KYAKAVDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB6 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=glyA PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 8.544e-60 Identity = 112/237 (47.26%), Postives = 161/237 (67.93%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 RPK+IV+GASAY R+ D+++IR++C++ A M+ DMAHI+GLVA G+ PSP YAD VTTTTHK+LRGPRG I ++ Y + +++A+FPG+QGGP HTI AV +A +YK Y +QV+ N + L G+ L+SGGT+NHL+L++L NK I G EK+L++V I NKNT+P + +S + GIR+GTPA+T+RGF EE+ K+AYF + +++ Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYADFVTTTTHKTLRGPRGGAILCKE--------------KYAKAVDKAIFPGIQGGPLMHTIAAKAVCFGEALREDYKEYMQQVVKNTKVLGEELKNYGFRLISGGTDNHLLLIDLTNKNITGKDAEKLLDSVGITVNKNTIPFETLSPFITSGIRIGTPAVTTRGFKEEEMKKIAYFMNYSIE 387 The following BLAST results are available for this feature:
BLAST of EY659702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659702 ID=EY659702; Name=EY659702; organism=Citrus sinensis; type=EST; length=892bpback to top |