EY659702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_POLNS (Serine hydroxymethyltransferase OS=Polynucleobacter necessarius (strain STIR1) GN=glyA PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.155e-56 Identity = 113/231 (48.92%), Postives = 154/231 (66.67%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 695 +PKLI+AGASAY++ D+ERI K+ + AI + DMAH +GLVAAGV P+P +AD+VT+TTHKSLRGPRG +I + ++E+ IN AVFPGLQGGP H I AVA K+A P +K YQ+QV++N A+TL+ G +VSGGT++H++LV+L+ K + G E+VL HI NKN +P D MV GIR+G+PA+T+RGF E + +V F Sbjct: 166 KPKLIIAGASAYSKKIDFERIGKLAKEVGAIFMVDMAHYAGLVAAGVYPNPVPHADIVTSTTHKSLRGPRGGIILMKA--------------EHEKAINFAVFPGLQGGPLMHVIAAKAVAFKEAAEPGFKDYQKQVVANAKALAETLIARGLRIVSGGTDSHVMLVDLRAKSMTGKEAERVLGEAHITCNKNGIPNDPEKPMVTSGIRLGSPAMTTRGFKEAEARQVGNF 382
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPH (Serine hydroxymethyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=glyA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.508e-56 Identity = 111/224 (49.55%), Postives = 152/224 (67.86%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEED 674 +PKLI+AG SAY+R+ D+ R R++ +K A ++AD+AH++GLVA G+ PSP YADVVTTTTHK+LRGPRG +I + K+ +E+ E+K+N +VFPG+QGGP H I AVA +A PE+K YQ+QVL+N L GY++VSGGT+NHL+LV+L NK I G + + +I NKN+VP D S V G+R+GTPA T+RGF E + Sbjct: 167 KPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTTTTHKTLRGPRGGLI--------LCKENEEI----EKKLNSSVFPGMQGGPLMHVIAAKAVAFAEALLPEFKTYQQQVLANARTMCSVLQSRGYDIVSGGTDNHLLLVDLINKGITGKEADAAVGRANITVNKNSVPNDPRSPFVTSGLRLGTPAATTRGFKERE 378
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPA (Serine hydroxymethyltransferase OS=Legionella pneumophila (strain Paris) GN=glyA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.508e-56 Identity = 111/224 (49.55%), Postives = 152/224 (67.86%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEED 674 +PKLI+AG SAY+R+ D+ R R++ +K A ++AD+AH++GLVA G+ PSP YADVVTTTTHK+LRGPRG +I + K+ +E+ E+K+N +VFPG+QGGP H I AVA +A PE+K YQ+QVL+N L GY++VSGGT+NHL+LV+L NK I G + + +I NKN+VP D S V G+R+GTPA T+RGF E + Sbjct: 167 KPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTTTTHKTLRGPRGGLI--------LCKENEEI----EKKLNSSVFPGMQGGPLMHVIAAKAVAFAEALLPEFKTYQQQVLANARTMCSVLQSRGYDIVSGGTDNHLLLVDLINKGITGKEADAAVGRANITVNKNSVPNDPRSPFVTSGLRLGTPAATTRGFKERE 378
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.508e-56 Identity = 118/251 (47.01%), Postives = 163/251 (64.94%), Query Frame = 3 Query: 3 TRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTK 752 T+PKLIVAGASAY R+ D+ R R + ++ A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI ++ ++ K+++A+FPGLQGGP H I AVA ++A P + AYQ+Q+ +N + A+ L + G++LVSGGT+NHL+LV+L+NK++ G EK L+ I NKN +P D S V GIR+GTPA TSRG E +VA A+ L + SE + K Sbjct: 165 TKPKLIVAGASAYPRVLDFARFRAIADEVGAMLMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCKQ--------------EWAAKVDKAIFPGLQGGPLMHIIAAKAVAFQEAMAPAFTAYQKQIAANAAALAKGLTDRGFQLVSGGTDNHLMLVDLRNKQLTGKEAEKRLDECRITVNKNAIPFDPQSPFVTSGIRIGTPAATSRGMDEAAMDQVA----EAIHLCLSDGSEGAMQK 397
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLONN (Serine hydroxymethyltransferase OS=Clostridium novyi (strain NT) GN=glyA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.508e-56 Identity = 108/237 (45.57%), Postives = 159/237 (67.09%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 713 +PK+IVAGASAY+R+ D++R++++C++ A + DMAHI+GL+AAG PSP YAD VTTTTHK+LRGPRG I ++ Y +++++A+FPG+QGGP H I AV +A +YK Y EQV+ N + L + ++LVSGGT+NHL+L++L NK I G EK+L+++ I NKNT+P + S V GIR+GTPA+T+RGF EE+ ++AY + ++ Sbjct: 165 KPKMIVAGASAYSRVIDFKRLKQICDEVGAYFMVDMAHIAGLIAAGYHPSPVPYADFVTTTTHKTLRGPRGGAILCKE--------------KYAKQVDKAIFPGIQGGPLMHVIAAKAVCFGEALKDDYKNYIEQVVKNAKVLEEELKKYDFKLVSGGTDNHLLLIDLTNKDITGKDAEKLLDSIGITVNKNTIPFETKSPFVTSGIRIGTPAVTTRGFKEEEMKEIAYLINYVIE 387
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_DICTD (Serine hydroxymethyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=glyA PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.970e-56 Identity = 118/253 (46.64%), Postives = 160/253 (63.24%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVA--------YFFDAAVKLAVKIKSE 737 +PKLIVAGASAY R+ D+E+ ++ A + DMAHI+GLVAAG+ PSP YA VT+TTHK+LRGPRG I +K ++ ++I++AVFPG+QGGP H I AVA K+A +PE+K YQ+Q++ N A+ L+++GY LVSGGT+NHL+LV+L++K I G EK LE I NKN +P D + GIR+GTPALT+RG E++ +A F D VK VK + E Sbjct: 163 KPKLIVAGASAYPRIIDFEKFAQIAEDVGAYFMVDMAHIAGLVAAGLHPSPVPYAHFVTSTTHKTLRGPRGGFILCKK--------------EFAKEIDKAVFPGIQGGPLMHVIAAKAVAFKEAMSPEFKEYQKQIVLNAKAMAEELIKLGYRLVSGGTDNHLMLVDLRDKGITGKEAEKALEEAGITVNKNAIPFDPQPPTITSGIRIGTPALTTRGMKEDEMRYIARLIHEVLSNFKDERVKEKVKKEVE 401
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOD6 (Serine hydroxymethyltransferase OS=Clostridium difficile (strain 630) GN=glyA PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.970e-56 Identity = 114/256 (44.53%), Postives = 164/256 (64.06%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTKLKNSWP 770 +PK+IVAGASAY R D+++ R++ ++ A+++ DMAHI+GLVAAG+ +P E AD VTTTTHK+LRGPRG +I ++ Y + I++A+FPG+QGGP H I AV K+A + E+K YQ QV N A+ L++ ++L+SGGT+NHL+L++L NK I G EK L+ +I ANKNT+P D + A+V GIR+GTPA+T+RG EED A +A D + + K+ L +P Sbjct: 164 KPKMIVAGASAYPREIDFKKFREIADEVGALLMVDMAHIAGLVAAGLHQNPCEVADFVTTTTHKTLRGPRGGVILCKE--------------KYAKDIDKAIFPGIQGGPLEHIIASKAVCFKEALSDEFKEYQVQVAKNAKALAEELIKRDFKLISGGTDNHLILLDLTNKNITGKAAEKRLDDAYITANKNTIPFDPNGALVTSGIRLGTPAVTTRGMKEEDMAIIAEAIDLCLTYDEESKARTLVVGLTEKYP 405
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBA (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=glyA PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 3.360e-56 Identity = 107/229 (46.72%), Postives = 155/229 (67.69%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 689 +PKLIVAGASAY+R+ D+++ R++C++ A ++ DMAHI+GLVAAG+ PSP YAD VT+TTHK+LRGPRG +I ++ Y + +++ +FPG+QGGP H I AV K+A P +K Y +V+ NC + + L++ G++LVS GT+NHL+LV+L NK I G EK+L+ V I NKNTVP + S V G+R+GT A+T+RGF +D ++A Sbjct: 165 KPKLIVAGASAYSRIIDFKKFREICDEIGAYLMVDMAHIAGLVAAGLHPSPVPYADFVTSTTHKTLRGPRGGLILCKE--------------KYAKDLDKNIFPGMQGGPLMHIIAAKAVCFKEALDPSFKEYMARVVENCKELGEQLVKRGFKLVSNGTDNHLILVDLNNKDITGKDAEKLLDEVGITLNKNTVPNETRSPFVTSGVRIGTAAITTRGFERKDMEEIA 379
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_THEPX (Serine hydroxymethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=glyA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.388e-56 Identity = 117/252 (46.43%), Postives = 162/252 (64.29%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTKLK 758 +PKLIVAGASAY R+ D++R R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I ++ +Y + I++A+FPG QGGP H I AV K+A T E+K YQ++++ N A L+E G LVSGGT+NHL+L++L+N I G +E L+ V+I NKN +P D + V G+R+GTPA+T+RG ED ++A D V + I+ EN K K Sbjct: 165 KPKLIVAGASAYPRIIDFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCKE--------------EYAKAIDKALFPGTQGGPLMHIIAAKAVCFKEALTDEFKEYQKRIVENAKALANALMERGINLVSGGTDNHLMLLDLRNTGITGKELETRLDEVNITCNKNAIPFDPLGPNVTSGVRLGTPAVTTRGMKPEDMVEIA---DIIVNV---IRDENYKEKAK 396
BLAST of EY659702 vs. ExPASy Swiss-Prot
Match: GLYA_THEP3 (Serine hydroxymethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=glyA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.388e-56 Identity = 117/252 (46.43%), Postives = 162/252 (64.29%), Query Frame = 3 Query: 6 RPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGTKLK 758 +PKLIVAGASAY R+ D++R R++ +K A ++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG I ++ +Y + I++A+FPG QGGP H I AV K+A T E+K YQ++++ N A L+E G LVSGGT+NHL+L++L+N I G +E L+ V+I NKN +P D + V G+R+GTPA+T+RG ED ++A D V + I+ EN K K Sbjct: 165 KPKLIVAGASAYPRIIDFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGAILCKE--------------EYAKAIDKALFPGTQGGPLMHIIAAKAVCFKEALTDEFKEYQKRIVENAKALANALMERGINLVSGGTDNHLMLLDLRNTGITGKELETRLDEVNITCNKNAIPFDPLGPNVTSGVRLGTPAVTTRGMKPEDMVEIA---DIIVNV---IRDENYKEKAK 396 The following BLAST results are available for this feature:
BLAST of EY659702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659702 ID=EY659702; Name=EY659702; organism=Citrus sinensis; type=EST; length=892bpback to top |