EY659682
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SC132_CANGA (Protein transport protein SEC13-2 OS=Candida glabrata GN=SEC132 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.430e-26 Identity = 88/282 (31.21%), Postives = 127/282 (45.04%), Query Frame = 1 Query: 13 LAKLSGHKGAVWEVAWAHPKFG-SILASCSFDGTVIIWKE---GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAP--------------------STAPGALXGFW--FS*PSSXALFRWL**YREGVEAVQWN---LEDGLLSSSSNAY*LG*RCCLGSQLGASKIYYCKCIGGWESYYMDCGQGRRSMGR*GVA*LQDPCL*SQLVTDW----NILAVADGNNNVTLWEKTMDGPWPQV 759 L L GH+G VW W HP G ++LA+C +DG V+IWKE G + I H H +SVN + WAPHE GL L CGS+DG ISV + T +D AH GV S+SWAP S L W + + L +++ V AV W+ L ++S SN +C + +Q +SK W+ ++ G+ + +G W N+LAV+D + NVT+W+++ DG W +V Sbjct: 48 LETLVGHEGPVWYADWCHPSLGENLLATCGYDGKVLIWKESGHGGKMQIIGKHAV--HSASVNCVKWAPHEYGLILLCGSADGKISVVELKDGQIASTKILDNAHKFGVNSISWAPLMKTDSSDDGDETTAVKQFISGGNDNLVKIWKFDDDQETYVVADTLEGHKDAVTAVDWSPTTLLQSYVASVSNDK----QCLVWTQDHSSK------KNDWKKISVNEGKFEQKLGS----------------VSWSLSGNLLAVSDDDKNVTIWKESGDGKWEEV 301
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SEH1_OSMMO (Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.469e-20 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 31 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPSTA 357 H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ WIK D ++SV + +AP +GL L S+DG + ++ A + S+ H + + +SW PS++ Sbjct: 56 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSS 175 HSP 2 Score: 36.1946 bits (82), Expect = 1.469e-20 Identity = 25/94 (26.60%), Postives = 41/94 (43.62%), Query Frame = 2 Query: 431 VKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKV---------LHDFKTPVYRVSWSLTGT 685 V++++ K L TD V D+A+APNLG +A A++D ++ R+ G + V+RVSW++T T Sbjct: 197 VQIYEYVENTRKYAKVETLMTVTDPVHDIAFAPNLGRSFHVLAIATKDVRIFKLIPMRKESSSSGPTKLEVQLQAQFDGHNSQVWRVSWNITST 290
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SEH1_MOUSE (Nucleoporin SEH1 OS=Mus musculus GN=Seh1l PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.594e-16 Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 31 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVG----VTSVSWAPSTA 357 H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP +GL LA S+DG + V+ A + S+ H V + +SW PS++ Sbjct: 56 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVY--EAPDVMNLSQWSLQHEVSCKLCCSCISWNPSSS 175
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SEH1_XENTR (Nucleoporin seh1 OS=Xenopus tropicalis GN=seh1l PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 31 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPSTA 357 H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+ H + + +SW PS++ Sbjct: 56 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSS 175
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SEH1_PONAB (Nucleoporin SEH1 OS=Pongo abelii GN=SEH1L PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 31 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPSTA 357 H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+ H + + +SW PS++ Sbjct: 56 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSS 175
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SEH1_HUMAN (Nucleoporin SEH1 OS=Homo sapiens GN=SEH1L PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 31 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPSTA 357 H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+ H + + +SW PS++ Sbjct: 56 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSS 175
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SEH1_BOVIN (Nucleoporin SEH1 OS=Bos taurus GN=SEH1L PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 31 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPSTA 357 H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+ H + + +SW PS++ Sbjct: 56 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSS 175
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SEH1B_XENLA (Nucleoporin seh1-B OS=Xenopus laevis GN=seh1l-B PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 31 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPSTA 357 H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+ H + + +SW PS++ Sbjct: 56 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSS 175
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SEH1A_XENLA (Nucleoporin seh1-A OS=Xenopus laevis GN=seh1l-A PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.718e-16 Identity = 45/122 (36.89%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 31 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPSTA 357 H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ W+K D ++SV + +AP +GL LA S+DG + ++ A + S+ H + + +SW PS++ Sbjct: 56 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLSCSCISWNPSSS 175
BLAST of EY659682 vs. ExPASy Swiss-Prot
Match: SEH1_DANRE (Nucleoporin seh1 OS=Danio rerio GN=seh1l PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 6.056e-16 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 31 HKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE--GNSNE-------WIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPV----GVTSVSWAPSTA 357 H G+VW V WAHP+FG +LASCSFD T +W+E G SN+ WIK D ++SV + +AP +GL L S+DG + ++ A + S+ H + + +SW PS++ Sbjct: 56 HSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIY--EAPDVMNLSQWSLQHEISCKLACSCISWNPSSS 175 The following BLAST results are available for this feature:
BLAST of EY659682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659682 ID=EY659682; Name=EY659682; organism=Citrus sinensis; type=EST; length=913bpback to top |