EY659680

Overview
NameEY659680
Unique NameEY659680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_LISMC (60 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groL PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.887e-51
Identity = 106/200 (53.00%), Postives = 147/200 (73.50%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP 795
            AKDI F + +R AM  G+D++++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV ++RGI+K V   +EEL+  ++PIE ++ I  VA IS+G D+ +G +IA+A+++VG DGV++I              GM+  +GY SP
Sbjct:    2 AKDIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISSG-DEEVGKLIAEAMERVGNDGVITIEESKGFATELDVVEGMQFDRGYTSP 200          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_LISIN (60 kDa chaperonin OS=Listeria innocua GN=groL PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.887e-51
Identity = 106/200 (53.00%), Postives = 147/200 (73.50%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP 795
            AKDI F + +R AM  G+D++++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV ++RGI+K V   +EEL+  ++PIE ++ I  VA IS+G D+ +G +IA+A+++VG DGV++I              GM+  +GY SP
Sbjct:    2 AKDIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISSG-DEEVGKLIAEAMERVGNDGVITIEESKGFATELDVVEGMQFDRGYTSP 200          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH602_MESSB (60 kDa chaperonin 2 OS=Mesorhizobium sp. (strain BNC1) GN=groL2 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.887e-51
Identity = 102/203 (50.25%), Postives = 140/203 (68.97%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            +AKD+ F   +R  M  G+D +++AV +TLGP+GRNVV+D+ FG+P++  DGVT+A+ IEL D  EN GA ++REVASKTND+AGDGTTTA+VL + I+K G  +V SG NP+ LKRGIDK V  +VEEL+K AR +   D+I  V TISA  D  IG  +A A++KVG +GV+++              GM+  +GY+SP F
Sbjct:    2 AAKDVKFHSDARERMLRGVDVLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDAAGDGTTTATVLTQAIVKEGAKAVASGMNPMDLKRGIDKAVEAIVEELKKNARKVTKNDEIAQVGTISANGDQEIGRFLAQAMEKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYF 204          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_ODOSI (60 kDa chaperonin, chloroplastic OS=Odontella sinensis GN=groL PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.464e-51
Identity = 103/202 (50.99%), Postives = 147/202 (72.77%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            AK I +   +R A++ G++ + +AV +TLGP+GRNVVL++ +GSP++VNDGVTIA+ I L D +EN G ALIR+ ASKTND AGDGTTTA+VLA  ++K GL +VT+GANP+S+K G++K    LV ++ + A+P+E    I+ VA+ISAGND+LIG++IADA+ KVG +GV+S+              GM+  +G+ISP F
Sbjct:    2 AKKILYQDNARRALERGMEIMVEAVSVTLGPKGRNVVLEKPYGSPQIVNDGVTIAKEINLEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAYAMVKEGLKNVTAGANPISIKLGMEKATQYLVTQINEFAQPVEDIQSIEQVASISAGNDNLIGSLIADALSKVGKEGVISLEEGKGIITELEITEGMKLEKGFISPYF 203          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_GRAFK (60 kDa chaperonin OS=Gramella forsetii (strain KT0803) GN=groL PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.464e-51
Identity = 102/203 (50.25%), Postives = 145/203 (71.43%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPI-EGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            AKDI FD ++R  ++ G+D +++AV +TLGP+GRNV++ + FG+P V  DGVT+A+ IEL DP+EN GA +++EVASKTND AGDGTTTA+VLA+ I++ GL +V +GANP+ LKRGIDK V  L  +L K+ + + +  + IK VA+ISA NDD+IG +IA A  KVG +GV+++              GM+  +GY+SP F
Sbjct:    2 AKDIKFDIQARNGIKRGVDALANAVKVTLGPKGRNVIISKSFGAPTVTKDGVTVAKEIELEDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVQEGLKNVAAGANPMDLKRGIDKAVEALTADLAKQTKEVGDSSEKIKQVASISANNDDMIGDLIAQAFGKVGKEGVITVEEAKGTETHVDVVEGMQFDRGYLSPYF 204          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH603_ANAVT (60 kDa chaperonin 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL3 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.464e-51
Identity = 99/201 (49.25%), Postives = 146/201 (72.64%), Query Frame = 1
Query:  202 KDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            K I +   +R  ++ G D +++AV +TLGP+GRN+VL++ FG+P++VNDGVTIA+ IEL DP EN G +L+R+ ASKTND AGDGTTTA VLA  ++K GL +VT+GA+P+++KRGIDK    ++E++++ ARPI+   DI+ VATISAGND  +G ++A+A+++VG +GV+S+              GM   +GY+SP F
Sbjct:    3 KTILYKDTARWTLEKGFDALTEAVAVTLGPKGRNIVLEKKFGAPQIVNDGVTIAKEIELEDPAENTGISLLRQAASKTNDVAGDGTTTAIVLAHAMLKEGLRNVTAGADPLTVKRGIDKATEFVIEKIQEHARPIKDSRDIEQVATISAGNDPEVGRIVAEAMERVGKEGVISLEEGRSTTTELEVTEGMRFDRGYVSPYF 203          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_DESRM (60 kDa chaperonin OS=Desulfotomaculum reducens (strain MI-1) GN=groL PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.218e-51
Identity = 103/200 (51.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP 795
            AK+I F + +R A++ G++ +++AV +TLGP+GRNVV+++ FG+P + NDGVTIAR IEL D  EN GA L++EVA+KTND AGDGTTTA+VLA+ +++ GL +V +GANP+ +KRGI+K V   VEE++  A+PIE ++ I  VAT+SA NDD IG +IA+A++KVG DGV+++              GM   +GYISP
Sbjct:    2 AKEIIFREDARRALERGVNALAEAVKVTLGPKGRNVVIEKKFGAPTITNDGVTIAREIELEDNFENMGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLKNVAAGANPMIIKRGIEKAVEKAVEEIKAMAKPIESKEAIAQVATVSA-NDDSIGNLIAEAMEKVGKDGVITVEESQGIGTNLEVVEGMNFDRGYISP 200          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_CLOB8 (60 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groL PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.218e-51
Identity = 108/227 (47.58%), Postives = 157/227 (69.16%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF-SQTLRNYC*I*NARVLVTIKNFCN 873
            AK + F + +R +MQ G+DK++D V +TLGP+GRNVVLD+ FG+P + NDGV+IAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI   V   VEE++K ++ ++G++DI  VA ISA  D+ +G +IADA++KVG +GV++I              GM+  +GY+SP   + T +    + N  +L+T K   N
Sbjct:    2 AKMLKFGEDARRSMQIGVDKLADTVKVTLGPKGRNVVLDKKFGAPLITNDGVSIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPILIRTGIKMAVDKAVEEIQKISKQVDGKEDIARVAAISAA-DEEVGKLIADAMEKVGNEGVITIEESKSMGTELDVVEGMQFDRGYVSPYMATDTEKMEAVLENPYILITDKKISN 227          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_CHLP8 (60 kDa chaperonin OS=Chlorobaculum parvum (strain NCIB 8327) GN=groL PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.218e-51
Identity = 104/203 (51.23%), Postives = 142/203 (69.95%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            +AKDI FD  +RA ++ G+DK+++AV +TLGP GRNV++D+ FG+P    DGVT+A+ IEL D  EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +V +GA P+ LKRGID+ V  +V EL   +R I G+ +I  V TISA ND  IG +IA+A+DKVG DGV+++              GM+  +GY+SP F
Sbjct:    2 AAKDILFDSDARAKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELEDAFENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGIDRAVKEVVAELRSISRNISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMDTELKVVEGMQFDRGYLSPYF 204          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_CHLCH (60 kDa chaperonin OS=Chlorobium chlorochromatii (strain CaD3) GN=groL PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.218e-51
Identity = 104/203 (51.23%), Postives = 145/203 (71.43%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            +AKDI FD  +RA ++ G+DK+++AV +TLGP GRNV++D+ FG+P    DGVT+A+ IELAD +EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +VT+GA P+ LKRGID+ V  +V EL+  +R I  + +I  V TISA ND  IG +IA+A++KVG DGV+++              GM+  +GY+SP F
Sbjct:    2 TAKDIFFDTDARAKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELADAVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVTAGARPIDLKRGIDRAVKEVVAELKAISRSISSKKEIAQVGTISANNDPEIGELIAEAMEKVGKDGVITVEEAKGMETELKVVEGMQFDRGYLSPYF 204          
The following BLAST results are available for this feature:
BLAST of EY659680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_LISMC1.887e-5153.0060 kDa chaperonin OS=Listeria monocytogenes seroty... [more]
CH60_LISIN1.887e-5153.0060 kDa chaperonin OS=Listeria innocua GN=groL PE=3... [more]
CH602_MESSB1.887e-5150.2560 kDa chaperonin 2 OS=Mesorhizobium sp. (strain B... [more]
CH60_ODOSI2.464e-5150.9960 kDa chaperonin, chloroplastic OS=Odontella sine... [more]
CH60_GRAFK2.464e-5150.2560 kDa chaperonin OS=Gramella forsetii (strain KT0... [more]
CH603_ANAVT2.464e-5149.2560 kDa chaperonin 3 OS=Anabaena variabilis (strain... [more]
CH60_DESRM3.218e-5151.5060 kDa chaperonin OS=Desulfotomaculum reducens (st... [more]
CH60_CLOB83.218e-5147.5860 kDa chaperonin OS=Clostridium beijerinckii (str... [more]
CH60_CHLP83.218e-5151.2360 kDa chaperonin OS=Chlorobaculum parvum (strain ... [more]
CH60_CHLCH3.218e-5151.2360 kDa chaperonin OS=Chlorobium chlorochromatii (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659680 ID=EY659680; Name=EY659680; organism=Citrus sinensis; type=EST; length=883bp
ACTTGTTGGTACCTTATCCGAAACATTTCCCTCAGCAGACCCTTTACTCC
GTTTGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTT
CCATTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAG
AATCAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGC
CAAAGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCA
TCGATAAGGTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGA
AATGTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGT
AACAATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTG
CTGCTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGAT
GGAACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACT
CCTGAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTG
ATAAAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAAGGCCAGGCCT
ATCGAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAA
TGATGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAAGTTGGTC
CTGATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAAACTACTGNT
GAAAGTGAGGAAGGAATGGAGATNNGACAGGGGTACATCTCTCCTCAGTT
TTCACAAACCCTGAGAAATTATTGTTGAATTTGAAATGCTAGAGTGCTGG
TCACGATCAAAAATTTCTGCAATAAGGAATATT
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