EY659680

Overview
NameEY659680
Unique NameEY659680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_BACAN (60 kDa chaperonin OS=Bacillus anthracis GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50
Identity = 109/227 (48.02%), Postives = 155/227 (68.28%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP-QFSQTLRNYC*I*NARVLVTIKNFCN 873
            AKDI F + +R +M  G+D +++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+++              GM+  +GY SP   + + +    + N  +L+T K   N
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISN 227          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_BACAH (60 kDa chaperonin OS=Bacillus thuringiensis (strain Al Hakam) GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50
Identity = 109/227 (48.02%), Postives = 155/227 (68.28%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP-QFSQTLRNYC*I*NARVLVTIKNFCN 873
            AKDI F + +R +M  G+D +++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+++              GM+  +GY SP   + + +    + N  +L+T K   N
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISN 227          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_BACAC (60 kDa chaperonin OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50
Identity = 109/227 (48.02%), Postives = 155/227 (68.28%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP-QFSQTLRNYC*I*NARVLVTIKNFCN 873
            AKDI F + +R +M  G+D +++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+++              GM+  +GY SP   + + +    + N  +L+T K   N
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISN 227          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_BACAA (60 kDa chaperonin OS=Bacillus anthracis (strain A0248) GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50
Identity = 109/227 (48.02%), Postives = 155/227 (68.28%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP-QFSQTLRNYC*I*NARVLVTIKNFCN 873
            AKDI F + +R +M  G+D +++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+++              GM+  +GY SP   + + +    + N  +L+T K   N
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVVAAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISN 227          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.086e-50
Identity = 108/227 (47.58%), Postives = 157/227 (69.16%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISP-QFSQTLRNYC*I*NARVLVTIKNFCN 873
            AKDI F + +R AM  G+D ++DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV +++G+++ V   +E L++ ++PIEG++ I  VA ISA  D+ +G++IA+A+++VG DGV++I              GM+  +GY SP   + + +    + N  +L+T K   N
Sbjct:    2 AKDIKFSEEARRAMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGMEQAVTVAIENLKEISKPIEGKESIAQVAAISAA-DEEVGSLIAEAMERVGNDGVITIEESKGFTTELEVVEGMQFDRGYASPYMVTDSDKMEAVLDNPYILITDKKITN 227          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50
Identity = 103/202 (50.99%), Postives = 146/202 (72.28%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            AK + F + +R A++ G+D V+DAV +TLGP+GRNVV+++ +GSP + NDGV+IA+ IEL D  EN GA L++EVASKTND AGDGTTTA+VLA+ +IK G+ +VT+GANP+ +KRGIDK V   VE+++  ++ +   DDI  VA+ISA N + IG +IA+A++KVG DGV+++              GM+  +GYISP F
Sbjct:    2 AKMLRFSEEARRALERGVDAVADAVKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGIKNVTAGANPILVKRGIDKAVAAAVEKIKDISKKLSNSDDIAHVASISA-NSEEIGKLIAEAMEKVGEDGVITVEDSKSIDTFVEFTEGMQFDRGYISPYF 202          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_THAPS (60 kDa chaperonin, chloroplastic OS=Thalassiosira pseudonana GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50
Identity = 101/202 (50.00%), Postives = 145/202 (71.78%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            AK I +   +R A++ G++ + +AV +TLGP+GRNVVL++ +GSP++VNDGVTIA+ I L D +EN G +LIR+ A+KTND AGDGTTTA+VLA  ++K GL +V +GANP+S+K G++K    LV ++ + A+P+E    IK VA+ISAGNDD+IG +IADA+ KVG +GV+S+              GM+  +G+ISP F
Sbjct:    2 AKKILYQDNARRALERGMEIMVEAVSVTLGPKGRNVVLEKTYGSPQIVNDGVTIAKEISLEDHIENTGVSLIRQAAAKTNDVAGDGTTTATVLAYAMVKEGLKNVAAGANPISIKLGMEKATQYLVMQINEFAQPVEDIQSIKQVASISAGNDDVIGALIADALAKVGKEGVISLEEGKGIVTELEITEGMKLEKGFISPYF 203          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_PASMU (60 kDa chaperonin OS=Pasteurella multocida GN=groL PE=3 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50
Identity = 100/203 (49.26%), Postives = 142/203 (69.95%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            +AKD+ F   +R  M AG++ ++DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V  +V EL+  ++P E   +I+ V TISA +D ++G +IA A+DKVG +GV+++              GM+  +GY+SP F
Sbjct:    2 AAKDVKFGNDARVKMLAGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVTAVVTELKALSKPCETSKEIEQVGTISANSDSIVGQIIAQAMDKVGKEGVITVEDGTGLEDELAVVEGMQFDRGYLSPYF 204          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_HAES2 (60 kDa chaperonin OS=Haemophilus somnus (strain 2336) GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50
Identity = 99/203 (48.77%), Postives = 143/203 (70.44%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            +AKD+ F   +R  M AG++ ++DAV +TLGP+GRNV+LD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V+ +VEEL+  ++P E   +I+ V TISA  D+ +G +IA A++KVG +GV+++              GM+  +GY+SP F
Sbjct:    2 TAKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVILDKAFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVSEGLKAVAAGMNPMDLKRGIDKAVNAVVEELKILSKPCETSKEIEQVGTISANADETVGKLIAQAMEKVGKEGVITVEDGSGLSDELDVVEGMQFDRGYLSPYF 204          
BLAST of EY659680 vs. ExPASy Swiss-Prot
Match: CH60_HAES1 (60 kDa chaperonin OS=Haemophilus somnus (strain 129Pt) GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.724e-50
Identity = 99/203 (48.77%), Postives = 143/203 (70.44%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKVSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKKARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIXXXXXXXXXXXXXXGMEXXQGYISPQF 801
            +AKD+ F   +R  M AG++ ++DAV +TLGP+GRNV+LD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V+ +VEEL+  ++P E   +I+ V TISA  D+ +G +IA A++KVG +GV+++              GM+  +GY+SP F
Sbjct:    2 TAKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVILDKAFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVSEGLKAVAAGMNPMDLKRGIDKAVNAVVEELKILSKPCETSKEIEQVGTISANADETVGKLIAQAMEKVGKEGVITVEDGSGLSDELDVVEGMQFDRGYLSPYF 204          
The following BLAST results are available for this feature:
BLAST of EY659680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BACAN2.086e-5048.0260 kDa chaperonin OS=Bacillus anthracis GN=groL PE... [more]
CH60_BACAH2.086e-5048.0260 kDa chaperonin OS=Bacillus thuringiensis (strai... [more]
CH60_BACAC2.086e-5048.0260 kDa chaperonin OS=Bacillus anthracis (strain CD... [more]
CH60_BACAA2.086e-5048.0260 kDa chaperonin OS=Bacillus anthracis (strain A0... [more]
CH60_BACA22.086e-5047.5860 kDa chaperonin OS=Bacillus amyloliquefaciens (s... [more]
CH60_THEM42.724e-5050.9960 kDa chaperonin OS=Thermosipho melanesiensis (st... [more]
CH60_THAPS2.724e-5050.0060 kDa chaperonin, chloroplastic OS=Thalassiosira ... [more]
CH60_PASMU2.724e-5049.2660 kDa chaperonin OS=Pasteurella multocida GN=groL... [more]
CH60_HAES22.724e-5048.7760 kDa chaperonin OS=Haemophilus somnus (strain 23... [more]
CH60_HAES12.724e-5048.7760 kDa chaperonin OS=Haemophilus somnus (strain 12... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659680 ID=EY659680; Name=EY659680; organism=Citrus sinensis; type=EST; length=883bp
ACTTGTTGGTACCTTATCCGAAACATTTCCCTCAGCAGACCCTTTACTCC
GTTTGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTT
CCATTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAG
AATCAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGC
CAAAGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCA
TCGATAAGGTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGA
AATGTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGT
AACAATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTG
CTGCTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGAT
GGAACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACT
CCTGAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTG
ATAAAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAAGGCCAGGCCT
ATCGAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAA
TGATGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAAGTTGGTC
CTGATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAAACTACTGNT
GAAAGTGAGGAAGGAATGGAGATNNGACAGGGGTACATCTCTCCTCAGTT
TTCACAAACCCTGAGAAATTATTGTTGAATTTGAAATGCTAGAGTGCTGG
TCACGATCAAAAATTTCTGCAATAAGGAATATT
back to top