EY659671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR2_RAT (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.496e-20 Identity = 75/230 (32.61%), Postives = 113/230 (49.13%), Query Frame = 3 Query: 21 KYLADLLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 KYL +L+AE+ L P FV SRLL++EI + G +GR D EE +L + + +K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y HL++ LHVL+E P R+ HA+ ++ L P + D +++QLR L+ LN Sbjct: 5 KYLPELMAEKDSLDPSFVHA----SRLLAEEIEKFQG----------------------SDGRKED---------EEKKYLD------------------VISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLN 179
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR2_XENTR (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.954e-20 Identity = 53/124 (42.74%), Postives = 82/124 (66.13%), Query Frame = 3 Query: 336 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 +K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D IKEE+L+ D+ + HL++ LHVL+E P R+ HA+ ++ L P + D +++QLR L+ LN Sbjct: 58 IKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKHAHLSDELHVLLEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLN 179
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR2_MOUSE (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.334e-20 Identity = 74/230 (32.17%), Postives = 113/230 (49.13%), Query Frame = 3 Query: 21 KYLADLLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 KYL +L+AE+ L P FV SRLL++EI + G +G+ D EE +L + + +K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y HL++ LHVL+E P R+ HA+ ++ L P + D +++QLR L+ LN Sbjct: 5 KYLPELMAEKDSLDPSFVHA----SRLLAEEIEKFQG----------------------SDGKKED---------EEKKYLD------------------VISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLN 179
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR2_HUMAN (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.334e-20 Identity = 74/230 (32.17%), Postives = 113/230 (49.13%), Query Frame = 3 Query: 21 KYLADLLAERQKLGP-FVQVLPLCSRLLSQEIRRITGYNPSFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGHLQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 KYL +L+AE+ L P FV SRLL++EI + G +G+ D EE +L + + +K R+ +PV +YP FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y HL++ LHVL+E P R+ HA+ ++ L P + D +++QLR L+ LN Sbjct: 5 KYLPELMAEKDSLDPSFVHA----SRLLAEEIEKFQG----------------------SDGKKED---------EEKKYLD------------------VISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLN 179
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR2_DANRE (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.686e-19 Identity = 51/124 (41.13%), Postives = 79/124 (63.71%), Query Frame = 3 Query: 336 VKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 +K R+ +PV +YP FNFVG++LGPRGNS+KR++ T ++ I G+GS++D KEE+L+ + Y HL+ LHVL+E P R+ HA+ ++ L P + D +++QLR L+ LN Sbjct: 58 IKLSERVLIPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHLSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYLN 179
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR3_RAT (KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.951e-18 Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 360 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 +PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y HLN+ LHVL+E P R+ HA+ ++ L P + D ++ QL+ L LN Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIP--DYNDEIRQAQLQELTYLN 175
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR3_MOUSE (KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.951e-18 Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 360 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 +PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y HLN+ LHVL+E P R+ HA+ ++ L P + D ++ QL+ L LN Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLN 175
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR3_HUMAN (KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.951e-18 Identity = 49/116 (42.24%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 360 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 +PV ++P FNFVG++LGPRGNSLKR++ T ++ I G+GS++D KEE+L+ + Y HLN+ LHVL+E P R+ HA+ ++ L P + D ++ QL+ L LN Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLN 175
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: BBP_DICDI (Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17 Identity = 69/221 (31.22%), Postives = 110/221 (49.77%), Query Frame = 3 Query: 72 QVLPLCSRLLSQEIRRITGYNP-SFVDHERFEHDSPFRSLGQPNGRPMDLEGLSAMQTEENGH-----LQRMAPFQTPPSMGWQGIPGIPTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLNRTLTE 716 Q+ L RL EI + P F + +R SP + R E + ++ H Q++ P PPS +Q P K+ ++ +P+ +P +NF+G I+GPRGN+ KR+E + ++ IRG+GS +D K KL+ + N+ LHVL+ A+ + +LD A ++ L PV+E + +K+QQLR LA +N TL E Sbjct: 91 QIAALILRLRVDEITKKITIGPIEFTERDRERSPSPPPTYDNNGKRSNTREQRIKEKLQKERHQLVVTAQQINPTYKPPS-DYQ-------PPNEKKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRDG-KPTKLQFQE-----NDELHVLLTADTVD-----QLDKAEVLVREFLIPVEEGKNEHKRQQLRELAEMNGTLRE 292
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR1_RAT (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.311e-16 Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 351 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P Y HLN LHV +E P + HA+ ++ L P + +D ++Q L+ LN Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 275 The following BLAST results are available for this feature:
BLAST of EY659671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659671 ID=EY659671; Name=EY659671; organism=Citrus sinensis; type=EST; length=809bpback to top |