EY659671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR1_MOUSE (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.311e-16 Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 351 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P Y HLN LHV +E P + HA+ ++ L P + +D ++Q L+ LN Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 275
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR1_HUMAN (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.311e-16 Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 351 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P Y HLN LHV +E P + HA+ ++ L P + +D ++Q L+ LN Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 275
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: KHDR1_CHICK (KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.311e-16 Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 351 RLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLK--DKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLN 701 R+ +PV +YP FNFVG+ILGP+GN++KR++ T ++ + G+GS++D KEE+L+ P Y HLN LHV +E P + HA+ ++ L P + +D ++Q L+ LN Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 258
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: BBP_ASHGO (Branchpoint-bridging protein OS=Ashbya gossypii GN=BBP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.814e-16 Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 3 Query: 360 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKP-GYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLNRTLTE 716 +P++ YP NFVG +LGPRGN+LK+++ + C++ IRGRGSVK+ + D P G ++NEPLH ++ A+ E I I++ + P E + +K+ QLR LA+LN TL E Sbjct: 155 IPINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEG---KAATDLPKGAMNMNEPLHCVISADTEEKIPLGINAGESIIIKAITFP--EGQNDFKRGQLRELAVLNGTLRE 269
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: SF01_HUMAN (Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4) HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15 Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 3 Query: 321 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLK---PVDESLDHYKKQQLRGLAMLNRTLTE 716 P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSVK+ + KD +EPLH LV A E++ AV + N+LK E + +K QLR LA LN TL E Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEG--KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRE 256
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: BBP_YEAST (Branchpoint-bridging protein OS=Saccharomyces cerevisiae GN=MSL5 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15 Identity = 47/122 (38.52%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 360 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENL-LKPV--DESLDHYKKQQLRGLAMLNRTLTE 716 +PVD+YP+ NFVG +LGPRG +L++++ + C++ IRGRGSVK+ L PG + +PLH L+ A+ + ++ + + +N+ +K V E + K+ QLR LA LN TL E Sbjct: 154 IPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDL--PPGAMNFEDPLHCLIIADSED-----KIQKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELAELNGTLRE 268
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: SF01_MOUSE (Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=5) HSP 1 Score: 81.2629 bits (199), Expect = 7.193e-15 Identity = 53/135 (39.26%), Postives = 74/135 (54.81%), Query Frame = 3 Query: 321 PTTPVVKRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLK---PVDESLDHYKKQQLRGLAMLNRTLTE 716 P T V +V+ +P D+YP NFVG ++GPRGN+LK +E ++ IRG+GSV++ + KD +EPLH LV A E++ AV + N+LK E + +K QLR LA LN TL E Sbjct: 132 PATRVSDKVM---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVEEG--KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLRE 256
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: BBP_SCHPO (Branchpoint-bridging protein OS=Schizosaccharomyces pombe GN=bpb1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.193e-15 Identity = 51/123 (41.46%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 360 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYE-HLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLK---PVDESLDHYKKQQLRGLAMLNRTLTE 716 VPV YP NF+G ++GPRG++LK +EA + ++ IRG+GSV KE K + P ++ E LH LV A+ ED IN HA+ +++N+++ V E + K+ QLR LA LN TL + Sbjct: 192 VPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSV----KEGKGRSDPSVRGNMEEDLHCLVTAD-SEDKIN----HAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATLNGTLRD 305
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: BBP_CANGA (Branchpoint-bridging protein OS=Candida glabrata GN=BBP PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.193e-15 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 3 Query: 360 VPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPVDESLDHYKKQQLRGLAMLNRTLTE 716 +PV +YP NFVG +LGPRG +L++++ + C++ IRGRGSVK+ L PG ++PLH L+ A+ E I N +++ + P E + K+ QLR LA LN TL E Sbjct: 140 IPVSQYPQINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKEGKTSSDL--PPGAMDFSDPLHCLIIADNEEKIENGIKACRNIVIKAVTSP--EGQNELKRGQLRELAELNGTLRE 254
BLAST of EY659671 vs. ExPASy Swiss-Prot
Match: BBP_CANAL (Branchpoint-bridging protein OS=Candida albicans GN=BBP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.602e-14 Identity = 45/129 (34.88%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 339 KRVIRLDVPVDKYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINXRLDHAVAILENLLKPV---DESLDHYKKQQLRGLAMLNRTLTE 716 + V RL VPV YP+ NFVG ++GPRGN+LK+++ + R+ IRG+GSVK+ + + + LHVL+ A+ P ++ AV ++ ++ + + ++ K+ QL+ LA+LN TL E Sbjct: 147 RTVERLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEGKSSDGFGSSQTGTDIQDDLHVLITADSP-----LKISKAVKLVNEIIDKLIFSPQGMNFMKRDQLKELAVLNGTLRE 270 The following BLAST results are available for this feature:
BLAST of EY659671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659671 ID=EY659671; Name=EY659671; organism=Citrus sinensis; type=EST; length=809bpback to top |