EY659660

Overview
NameEY659660
Unique NameEY659660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.535e-51
Identity = 95/254 (37.40%), Postives = 152/254 (59.84%), Query Frame = 2
Query:   44 GQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            G+  A N +A+GHYT G ELID VLD +RK+ ENC+ LQGF + H              + ++  E+  +  + FSV+P+P+VS +VVEPYN+ L+ H  +E +D   ++DNEA+YD+C + L +  PS+ +LN LI+  +S +T  LRF G LN DL +   NL+P+PR+HF +  +AP+ +     +  L++ ++T   ++  N M   DP  G+Y+    ++RG +  K V+  + +V+ K    FV+W P
Sbjct:   98 GKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVERPSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCP 351          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA3E_HUMAN (Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.535e-51
Identity = 93/256 (36.33%), Postives = 152/256 (59.38%), Query Frame = 2
Query:   38 VFGQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            + G+  A + +A+GHYT G E++D VLD +RK A+ C  LQGF I H              + ++  +Y  +  + F+++P+P+VS  VVEPYN+ L+ H  +E++D   ++DNEA+YDIC R L +  P++ +LN LI   +S +T  LRF G LN DL +   NL+P+PR+HF +  +AP+ +     +  L++ E+T   ++  N M   DPRHG+Y+    ++RG +  K V+  +  ++ K +  FV+W P
Sbjct:   93 ITGKEDAASNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCP 348          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 1.535e-51
Identity = 93/256 (36.33%), Postives = 150/256 (58.59%), Query Frame = 2
Query:   38 VFGQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            + G+  A N +A+GHYT G E+ ++VLD +RK  +NC  LQGF + H              + ++ ++Y  +  + FSV+P+P+V+  VVEPYNA L+ H  +E++D   ++DNEA+YDIC R L +  PS+  LN LI+  +S +T  LRF G LN DL +   NL+PFPR+H+ ++ +AP+ +     + +    ELT   ++  N M   DPR+G+Y+    ++RG +  +     +  ++ K+S   VEW P
Sbjct:   94 ISGKEDAANNYARGHYTVGKEMAENVLDRIRKITDNCHSLQGFLVFHSFGGGTGSGFGALVLERLAQDYAKKCKLEFSVYPAPRVATAVVEPYNAVLATHSTLEHSDVTFLVDNEAVYDICRRNLDIPRPSYEHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPFPRVHYPLISYAPVISATKSAHESFKTSELTLQCFEPNNQMVVCDPRNGKYMAVALLYRGDVVPRDTSAAVAALKAKSSFNLVEWCP 349          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA_GLOLA (Tubulin alpha chain OS=Glomerella lagenarium GN=TUB1 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.005e-51
Identity = 95/256 (37.11%), Postives = 152/256 (59.38%), Query Frame = 2
Query:   38 VFGQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            + G+  A N +A+GHYT G E++D+V+D +R+ A+NC  LQGF I H              + ++  EY  +  + F+V+P+P+VS  VVEPYNA LS H  +EN+D   ++DNEA+YDIC R L +  PS+  LN LI+  +S +T  LRF G LN DL +   NL+P+PR+H+ ++ +AP+ +     + +  + +LT   ++  N M   DPR+G+Y+    ++RG    +  +  +  ++ K+S   VEW P
Sbjct:   94 ISGKEDAANNYARGHYTIGKEMVDNVIDRIRRVADNCHSLQGFLIFHSFGGGTGSGFGALLLERLSTEYGKKSKLEFAVYPAPRVSTAVVEPYNAVLSTHSTIENSDCTFLVDNEAVYDICRRNLDIPRPSYDHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPYPRIHYPLISYAPVISGFKSAHESFKV-QLTFQCFEPNNQMVVCDPRNGKYMAVALLYRGDAVPRDCNAAIAALKAKSSFNLVEWCP 348          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA_ENCCU (Tubulin alpha chain OS=Encephalitozoon cuniculi GN=TUB1 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.619e-51
Identity = 91/256 (35.55%), Postives = 155/256 (60.55%), Query Frame = 2
Query:   38 VFGQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            + G+  A N +A+GHYT G E+I+  ++ +R+ A++CD LQGF I H              + ++  E+  +  + FSV+P+PK++  VVEPYN+ L+ H  ++ +D   ++DNEA+YD+C R L +  P + D+N +I+  +S +T  LRFPG LN DL +   NL+P+PR+HF +V ++P+ ++    +  L++ E+T   ++ +N M   D R G+Y+    +FRG ++ K  +    NV+ K ++ FVEW P
Sbjct:   90 ISGKEDAANNYARGHYTVGKEIIEPAMEQIRRMADSCDGLQGFLIYHSFGGGTGSGFASLMMDRLAAEFGKKSKLEFSVYPAPKIATAVVEPYNSILTTHTTLDYSDCSFLVDNEAIYDMC-RNLGIQRPYYTDINRVIAQVVSSITASLRFPGSLNVDLTEFQTNLVPYPRIHFPLVAYSPMLSKEKAAHEKLSVQEITNACFEPQNQMVRCDTRKGKYMACCLLFRGDVNPKEANNATANVKAKRTNQFVEWCP 344          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.619e-51
Identity = 96/257 (37.35%), Postives = 154/257 (59.92%), Query Frame = 2
Query:   44 GQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMM-MTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSS--YFVEWNP 805
            G+  A N +A+GHYT G ELI+   D +RK A+ C+ LQGF + H              + ++  EY  +   + F V+PSP+VS +VVEPYN+ LS H L+E+ D   +LDNEA+Y+IC ++L +  P++ +LN LI+  +S +T  LRFPG LN D+  +  NL+PFPRLHF +  +AP+ ++   ++  +T+  +T  ++   N+M    P  G+Y+    M+RG +  K   + + N++N+ S    FV+W+P
Sbjct:    3 GKEDAANNYARGHYTVGKELIEVCADRIRKLADQCEGLQGFLVFHSVGGGTGSGFGSLLLQRLALEYGGKKSKLDFCVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSFMLDNEAIYNICKKSLDIEKPTYTNLNRLIAQVISSLTSSLRFPGPLNLDINDIQTNLVPFPRLHFVLCSYAPVISKEKSEHENITVDAITNSVFSENNIMAKCQPHLGKYMACCLMYRGNIVPKEAQKAVQNIRNEKSKTVSFVDWSP 259          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA1_EMENI (Tubulin alpha-1 chain OS=Emericella nidulans GN=tubA PE=3 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.619e-51
Identity = 92/258 (35.66%), Postives = 153/258 (59.30%), Query Frame = 2
Query:   32 NFVFGQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            N + G+  A N +A+GHYT G E+ID VLD VR+ A++C  LQGF + H              + ++  +Y  +  + F V+P+P+ + +VVEPYN+ L+ H  +E++D   ++DNEA+YDIC R L +  PS+ +LN LI+  +S +T  LRF G LN DL +   NL+P+PR+HF +V ++P+ +     + A ++ ++T   ++  N M   DPR+G+Y+    ++RG +  K     +  ++ K +  FV+W P
Sbjct:   91 NLITGKEDASNNYARGHYTVGKEMIDQVLDKVRRMADSCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQNATSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGIERPSYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVAYSPVISADKASHEANSVQDITMSCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKETHAAVATLKTKRTIQFVDWCP 348          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA2_CHICK (Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.467e-51
Identity = 93/256 (36.33%), Postives = 150/256 (58.59%), Query Frame = 2
Query:   38 VFGQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            + G+  A N +A+GHYT G + +D V D +RK A++C  LQGF I H              + ++  EY  +  + F+++P+P+ S  VVEPYN+ L+ H  +E++D   ++DNEA+YDIC R L +  P++ +LN LIS  +S +T  LRF G LN DL +   NL+PFPR+HF +V +AP+ +     +  L++ E+T   ++  N M   DP+ G+Y+    ++RG +  K V+  +  ++   S  FV+W P
Sbjct:   90 ITGKEDAANNYARGHYTVGKDKVDMVSDRIRKLADSCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVEYGKKSKLEFAIYPAPQASSAVVEPYNSVLTTHTTLEHSDCVFMVDNEAIYDICHRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPFPRIHFPLVTYAPIISSDRAYHEQLSVAEITSSCFEPNNQMVKCDPQQGKYMACCMLYRGDVVPKDVNVAIAAIKTNRSLQFVDWCP 345          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA2_HOMAM (Tubulin alpha-2 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.620e-51
Identity = 92/256 (35.94%), Postives = 151/256 (58.98%), Query Frame = 2
Query:   38 VFGQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            + G+  A N +A+GHYT G E +D VLD +RK A+ C  LQGF I                + ++  EY  +  +  +++P+P+ + +VVEPYN+ L+ H  +E++D C ++DNEA++DIC R L ++ P++ +LN LI   +S +T  LRF G LN DL +   NL+P+PR+HF +  ++P+ +     +  L++ E+T   ++  N M   DPRHG+Y+    ++RG +  K V   + NV+ K +  FV+W P
Sbjct:   93 ISGKEDAANNYARGHYTIGKEYVDIVLDRIRKLADQCTGLQGFLIFRSFGGGTGSGFASLLMERLSVEYGKKSKLEIAIYPAPQSATSVVEPYNSILTTHTTLEHSDCCFMVDNEAIFDICQRNLDVSRPTYTNLNRLIGQIVSSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLTTYSPIISAEKAYHEQLSVGEITSACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVTASIANVKTKRTIQFVDWCP 348          
BLAST of EY659660 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.698e-50
Identity = 93/258 (36.05%), Postives = 150/258 (58.14%), Query Frame = 2
Query:   32 NFVFGQNGAGNTWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTARGSQQYRALTIPELTQXMWDSKNMMCAADPRHGRYLTAXAMFRGKMSTKGVDEHMINVQNKNSSYFVEWNP 805
            + + G+  A N +A+GHYT G ELID VLD VR+ A+NC  LQGF + H              + ++  +Y  +  + F V+P+P+ + +VVEPY+  L+ +  +E AD   ++DNEA+YDIC R L L  P++ +LN LI+  +S +T  LRF G LN DL +   NL+P+PR+HF +V +AP+ +     + A ++ E+T   ++  N M   DPRHG+Y+    ++ G +        + +++ K +  FV+W P
Sbjct:   91 HMISGKEDASNNYARGHYTVGKELIDQVLDKVRRVADNCSGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATSVVEPYHNFLTTNTTLEQADCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVAYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYGGDVVPNDAHAAVASLKTKRTIQFVDWCP 348          
The following BLAST results are available for this feature:
BLAST of EY659660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
TBA8_CAEEL1.535e-5137.40Tubulin alpha-8 chain OS=Caenorhabditis elegans GN... [more]
TBA3E_HUMAN1.535e-5136.33Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E P... [more]
TBA1_NEUCR1.535e-5136.33Tubulin alpha-A chain OS=Neurospora crassa GN=tba-... [more]
TBA_GLOLA2.005e-5137.11Tubulin alpha chain OS=Glomerella lagenarium GN=TU... [more]
TBA_ENCCU2.619e-5135.55Tubulin alpha chain OS=Encephalitozoon cuniculi GN... [more]
TBA_DICPU2.619e-5137.35Tubulin alpha chain (Fragment) OS=Dictyostelium pu... [more]
TBA1_EMENI2.619e-5135.66Tubulin alpha-1 chain OS=Emericella nidulans GN=tu... [more]
TBA2_CHICK4.467e-5136.33Tubulin alpha-2 chain OS=Gallus gallus PE=2 SV=1[more]
TBA2_HOMAM7.620e-5135.94Tubulin alpha-2 chain OS=Homarus americanus PE=2 S... [more]
TBA_SORMA1.698e-5036.05Tubulin alpha chain OS=Sordaria macrospora GN=TUBA... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659660 ID=EY659660; Name=EY659660; organism=Citrus sinensis; type=EST; length=922bp
GCCGGNATTCCAAGGCCGACCCACGCGTCCGAATTTTGTTTTTGGCCAAA
ATGGTGCTGGAAACACCTGGGCCAAGGGGCACTACACCGAAGGAGCTGAA
TTGATTGATTCAGTTCTTGATGTTGTTCGTAAAGAAGCTGAGAATTGTGA
CTGCCTACAAGGCTTTCAGATTTGCCACTCACTTGGAGGGGGGACTGGAT
CAGGAATGGGAACTCTACTGATATCAAAGATTAGAGAAGAATATCCTGAT
CGTATGATGATGACCTTTTCCGTTTTCCCATCACCTAAAGTCTCTGACAC
AGTTGTTGAGCCTTACAACGCCACACTCTCTGTGCACCAGCTTGTTGAAA
ATGCCGATGAGTGTATGGTCCTTGACAATGAAGCTCTCTACGATATCTGC
TTTCGAACTCTCAAGCTCACAAATCCCAGCTTTGGTGATCTGAACCATTT
GATCTCAACAACAATGAGTGGAGTAACATGCTGCCTTCGTTTCCCCGGCC
AACTCAACTCTGATCTTCGGAAATTAGCCGTAAACTTGATCCCATTCCCA
CGCCTGCACTTTTTCATGGTTGGTTTTGCGCCCTTAACAGCTCGCGGGTC
ACAGCAGTACCGCGCTCTGACAATTCCTGAGCTTACTCAACANATGTGGG
ATTCTAAAAACATGATGTGCGCTGCTGATCCTCGCCATGGTAGGTATTTG
ACTGCCTNCGCAATGTTCCGAGGCAAAATGAGTACAAAGGGAGTTGACGA
ACATATGATCAATGTACAAAACAAGAATTCTTCATACTTTGTTGAGTGGA
ATCCGCCATATGTTAACTCAAGGGTTTGGGACATTCCCCCACTGGGGTAT
CAATGTCGGCAACGTTTATTGGGGATTCTACCTCCATCCAAGAAAAGTTC
AGGCGTGGTTCAGAACAATTCC
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